| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356337
Identifier: 119356337
GI number: 119356337
Start: 549630
End: 550088
Strand: Direct
Name: 119356337
Synonym: Cpha266_0500
Alternate gene names: NA
Gene position: 549630-550088 (Clockwise)
Preceding gene: 119356336
Following gene: 119356346
Centisome position: 17.54
GC content: 48.37
Gene sequence:
>459_bases ATGCGAGACCATACTCCTGACTTTAAAATGCATGAGCTTTCCATCGAAAACAAGGGGCTTATTCGTCAGACGGTTCAGCA GCTTCTCGAAAAGCTTGCAGGCGACGGCAAACTTGCCTGCGATTCGCTTCTTGAATTCTGGGTTGAAGTTCCCGGGGTTC AACATCCGAGAGGCACGTTTCAGGGAGGGTTTCTTATGCCCGACAGTTTCATCTATATTACCGATTATTTTACATGCGGC GTGCAGGCTCTTAAGCCGCTGCCTGCATATGAAGAGAGCGATGGCGGTGTGGACAGAGTGTGGGATGATCTTTTTGATGA GCTCTTCTATCAGATAGAGATTTTTACCTCTACGGCAGTATCGCCAAAAGGCATTACGCTTGAACTCTGGGCAGGTAATC GTCTTCGCCCCGAAGGAGAGTGGGTCTATGCCGTTGACAGAAAGATAGAGCTTTTTTAG
Upstream 100 bases:
>100_bases GTTTGTTATCTCCATGTAATGCTTCATAATAGGGTTAAATGGCCGTATATTACAGCCAGAGGAATAGATTCCGCCATTCA CAAACTCATTGTTTACTACT
Downstream 100 bases:
>100_bases TCTGCGATCGGATTTTTATCCTTAAAGGCGCAGATTTCCTTAAGCACGCAATCTGCGCATGCCGGCTTTTTTGCTTTACA GGTATAGCGTCCGTGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRDHTPDFKMHELSIENKGLIRQTVQQLLEKLAGDGKLACDSLLEFWVEVPGVQHPRGTFQGGFLMPDSFIYITDYFTCG VQALKPLPAYEESDGGVDRVWDDLFDELFYQIEIFTSTAVSPKGITLELWAGNRLRPEGEWVYAVDRKIELF
Sequences:
>Translated_152_residues MRDHTPDFKMHELSIENKGLIRQTVQQLLEKLAGDGKLACDSLLEFWVEVPGVQHPRGTFQGGFLMPDSFIYITDYFTCG VQALKPLPAYEESDGGVDRVWDDLFDELFYQIEIFTSTAVSPKGITLELWAGNRLRPEGEWVYAVDRKIELF >Mature_152_residues MRDHTPDFKMHELSIENKGLIRQTVQQLLEKLAGDGKLACDSLLEFWVEVPGVQHPRGTFQGGFLMPDSFIYITDYFTCG VQALKPLPAYEESDGGVDRVWDDLFDELFYQIEIFTSTAVSPKGITLELWAGNRLRPEGEWVYAVDRKIELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17405; Mature: 17405
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHTPDFKMHELSIENKGLIRQTVQQLLEKLAGDGKLACDSLLEFWVEVPGVQHPRGTF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC QGGFLMPDSFIYITDYFTCGVQALKPLPAYEESDGGVDRVWDDLFDELFYQIEIFTSTAV CCCEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEHEEECCCC SPKGITLELWAGNRLRPEGEWVYAVDRKIELF CCCCCEEEEECCCCCCCCCCEEEEECCEEECC >Mature Secondary Structure MRDHTPDFKMHELSIENKGLIRQTVQQLLEKLAGDGKLACDSLLEFWVEVPGVQHPRGTF CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC QGGFLMPDSFIYITDYFTCGVQALKPLPAYEESDGGVDRVWDDLFDELFYQIEIFTSTAV CCCEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEHEEECCCC SPKGITLELWAGNRLRPEGEWVYAVDRKIELF CCCCCEEEEECCCCCCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA