| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356332
Identifier: 119356332
GI number: 119356332
Start: 541738
End: 543801
Strand: Direct
Name: 119356332
Synonym: Cpha266_0495
Alternate gene names: NA
Gene position: 541738-543801 (Clockwise)
Preceding gene: 119356331
Following gene: 119356335
Centisome position: 17.29
GC content: 50.58
Gene sequence:
>2064_bases ATGGCCCGTTTGCATCTCCTGCAGAGTTGCCGCCGGATGTTTTTGTCCGTTCTGCTTTTATTTGTTTGCGGCCTCACTCT TTTGCCTGCTCCCGGATATGGACGGGACGAATTACAGAGATTTCTTGAACAGCGCGAGTTTGACGGAGATATTGAGCAGC TTGCTTTGCAGCTTGAAGATCTCCGTTCGAATCCTCTTGTGCTCAATGCCATCGATCCGGAAGAACTTCGCGTTTTACCC TGGCTCGCCTCTGCCGATATACAGGCCGTTGCCCTCTATCGGCGCGAGAAAGGGCGCATCCGCTCAAAATCTCAACTTGA GGAAGTTCTCGGCAAAGAGAAAGCTGCGGCTACGCTTCCCTTTATTACGTTCAGCGATCGGGACGTTCCTCGTGAAGCGG GATCAGCCTGGAAGCCATCAGGAACGCTTTACAGCCGTGTGTCCTGGGATACCACGCTACGGGACGGCATCAGGGATGGA CGGTATGCGGGCGAGAACTACAAATTGTATAACAGGTTGCAGGTCGGCAGACCCCATCTGAAAATCAGTCTGGTTCATGA CAAGGATATCGGTGAACCTGATTTTGCGGATTTTATCTCCTTGAGCGTTAACGGTTATGATTTCGGTGCGCTTAAAAGCT TTGTTATTGGCAACTATGAGCTGAATTTCGGCCAGGGACTTCTGATGGGCCAGGGACGGTTTTTTTCAAAAGGTTCTGAT CCTGCAAACAGTGTGCGACTTGCTTCAAAGCGTTTGACTGCCTATGCGTCGAGTTCGGAATATGGATTCATGCAGGGTCT GGCTGCTTCTGTCGTGCTGGATCCGTTTGAACTGACCGCCTTTTATTCCGACAATCTGGTTGATGCGCGGATTACTCGGC AGAAGAATACAGAGTTTTACTTTATCACGAGTCTTGATGATGCCGGATATCATCGCACCAATACCGAAATTCGCAGAAAA GACAATGTCCATGAAAAAGTATCCGGCGCGAACCTGGTTGTTCATGTCAATAACGGTCTCTTGCGGGGGAGTGCCGGAGG AACCTTGCTGCACTATGCCTATGATGAAGAACGGATACTTCCCGATGGCACAACAACCTCTTTTGCCAATCTTTTCGGAT TTGAAACTGAATTTTCACTTGGCGACCTGAGCGTGTTTGCTGAAGCTGTTTTTTCCGAAAAGCCGGATGATTTTTCATGG ATAGCTGGTGCGGAATACGAGCTCATAAAAGGTCTCGATCTTCAGACGGCTATTCGCAACTACGGGGTAAACTATTTTTC ACCCTTTGCCGGCGCTTTTGCTGAACGTGGCGACGATGCGTCCAACGAAGAGGGCTTCTATATCGGCCTTGAGGCGAAGT TCAGTAAAAAACTCAGGGCAGCAGCTTATGTTGACTGGTTCCGGTTTCCTTCGCTCAGCGGCGATGATGATTACCCCTAT GCTTCTGAAGGTTATGATACCCGGTTCTATTTGACTTGGAAGCAGACGCCCTCCGTTGTCTGGAACCTGCAACTTCAGCA CAAGGAGAAAGAGGAGGCCAGAAAGCAGTGTCCGATTGTCAACGGGGTTCTGGTTCCATGCAAGGATAGCAAAAGGGTCT ATTCGGCGCTGCCTGTGGTCAGCGACCGGGCCAGACTCTATTGTGACGTGATGCCGTCCCGGAAGTTTCATCTGAGAACA CTCGGGGAGGTGAAGCGGGTGGTCAACGATTTTCGTGCAGGCGATGAGCGCCTTTTCGGGTACCTGCTTTACCAGCAGGT GCACTATGAATCGGGGCCGTTGAGTTTCAAGGGTCGGGTGACGCTTTTCAATACCGATGACTTCGATTCTGCAATCTATG TCTATGAGGATGATCTCCCTCTTGTTTTTAACACCGCCATGTTCAGCGGCAGGGGAAAGGCGCTCATGTTGCTTGCATCA TGGGATGTTATGCAATCGATGACTCTCGGGGCAAAATACGAGGTAGCCTGGTACACAGACAGAGCTGTGTTCAGTTCAGG CGCTGATCAGCGGGATACCAGCGCTCCCGGCACCGTTACACTCGGGTGTTCACTGAGATTTTAG
Upstream 100 bases:
>100_bases AGCCTGGCGCCACCTGAGCAAGAACGAAGTTCGGGAGTTGTATCGATTGTAGTGCTTTTCAGTAGCAGCAGTTTTCAGCA ACAGACCTGTTTTATAGCGT
Downstream 100 bases:
>100_bases GTGGTGCCATTTTTACTCTCATGTTCGCCCGATGCCCGCATAAGCCGGTCGTGAATTGCCCGTCCCAACCCTTTTTGTTC CGGCAGTTCACAATAGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MARLHLLQSCRRMFLSVLLLFVCGLTLLPAPGYGRDELQRFLEQREFDGDIEQLALQLEDLRSNPLVLNAIDPEELRVLP WLASADIQAVALYRREKGRIRSKSQLEEVLGKEKAAATLPFITFSDRDVPREAGSAWKPSGTLYSRVSWDTTLRDGIRDG RYAGENYKLYNRLQVGRPHLKISLVHDKDIGEPDFADFISLSVNGYDFGALKSFVIGNYELNFGQGLLMGQGRFFSKGSD PANSVRLASKRLTAYASSSEYGFMQGLAASVVLDPFELTAFYSDNLVDARITRQKNTEFYFITSLDDAGYHRTNTEIRRK DNVHEKVSGANLVVHVNNGLLRGSAGGTLLHYAYDEERILPDGTTTSFANLFGFETEFSLGDLSVFAEAVFSEKPDDFSW IAGAEYELIKGLDLQTAIRNYGVNYFSPFAGAFAERGDDASNEEGFYIGLEAKFSKKLRAAAYVDWFRFPSLSGDDDYPY ASEGYDTRFYLTWKQTPSVVWNLQLQHKEKEEARKQCPIVNGVLVPCKDSKRVYSALPVVSDRARLYCDVMPSRKFHLRT LGEVKRVVNDFRAGDERLFGYLLYQQVHYESGPLSFKGRVTLFNTDDFDSAIYVYEDDLPLVFNTAMFSGRGKALMLLAS WDVMQSMTLGAKYEVAWYTDRAVFSSGADQRDTSAPGTVTLGCSLRF
Sequences:
>Translated_687_residues MARLHLLQSCRRMFLSVLLLFVCGLTLLPAPGYGRDELQRFLEQREFDGDIEQLALQLEDLRSNPLVLNAIDPEELRVLP WLASADIQAVALYRREKGRIRSKSQLEEVLGKEKAAATLPFITFSDRDVPREAGSAWKPSGTLYSRVSWDTTLRDGIRDG RYAGENYKLYNRLQVGRPHLKISLVHDKDIGEPDFADFISLSVNGYDFGALKSFVIGNYELNFGQGLLMGQGRFFSKGSD PANSVRLASKRLTAYASSSEYGFMQGLAASVVLDPFELTAFYSDNLVDARITRQKNTEFYFITSLDDAGYHRTNTEIRRK DNVHEKVSGANLVVHVNNGLLRGSAGGTLLHYAYDEERILPDGTTTSFANLFGFETEFSLGDLSVFAEAVFSEKPDDFSW IAGAEYELIKGLDLQTAIRNYGVNYFSPFAGAFAERGDDASNEEGFYIGLEAKFSKKLRAAAYVDWFRFPSLSGDDDYPY ASEGYDTRFYLTWKQTPSVVWNLQLQHKEKEEARKQCPIVNGVLVPCKDSKRVYSALPVVSDRARLYCDVMPSRKFHLRT LGEVKRVVNDFRAGDERLFGYLLYQQVHYESGPLSFKGRVTLFNTDDFDSAIYVYEDDLPLVFNTAMFSGRGKALMLLAS WDVMQSMTLGAKYEVAWYTDRAVFSSGADQRDTSAPGTVTLGCSLRF >Mature_686_residues ARLHLLQSCRRMFLSVLLLFVCGLTLLPAPGYGRDELQRFLEQREFDGDIEQLALQLEDLRSNPLVLNAIDPEELRVLPW LASADIQAVALYRREKGRIRSKSQLEEVLGKEKAAATLPFITFSDRDVPREAGSAWKPSGTLYSRVSWDTTLRDGIRDGR YAGENYKLYNRLQVGRPHLKISLVHDKDIGEPDFADFISLSVNGYDFGALKSFVIGNYELNFGQGLLMGQGRFFSKGSDP ANSVRLASKRLTAYASSSEYGFMQGLAASVVLDPFELTAFYSDNLVDARITRQKNTEFYFITSLDDAGYHRTNTEIRRKD NVHEKVSGANLVVHVNNGLLRGSAGGTLLHYAYDEERILPDGTTTSFANLFGFETEFSLGDLSVFAEAVFSEKPDDFSWI AGAEYELIKGLDLQTAIRNYGVNYFSPFAGAFAERGDDASNEEGFYIGLEAKFSKKLRAAAYVDWFRFPSLSGDDDYPYA SEGYDTRFYLTWKQTPSVVWNLQLQHKEKEEARKQCPIVNGVLVPCKDSKRVYSALPVVSDRARLYCDVMPSRKFHLRTL GEVKRVVNDFRAGDERLFGYLLYQQVHYESGPLSFKGRVTLFNTDDFDSAIYVYEDDLPLVFNTAMFSGRGKALMLLASW DVMQSMTLGAKYEVAWYTDRAVFSSGADQRDTSAPGTVTLGCSLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77400; Mature: 77269
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLHLLQSCRRMFLSVLLLFVCGLTLLPAPGYGRDELQRFLEQREFDGDIEQLALQLED CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH LRSNPLVLNAIDPEELRVLPWLASADIQAVALYRREKGRIRSKSQLEEVLGKEKAAATLP HCCCCEEEECCCHHHEEEEEEECCCCCCEEEEHHHHCCCCCCHHHHHHHHCCCHHHEECC FITFSDRDVPREAGSAWKPSGTLYSRVSWDTTLRDGIRDGRYAGENYKLYNRLQVGRPHL EEEECCCCCCHHCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEECCCCCE KISLVHDKDIGEPDFADFISLSVNGYDFGALKSFVIGNYELNFGQGLLMGQGRFFSKGSD EEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHEEECEEEECCCEEEEECCEECCCCCC PANSVRLASKRLTAYASSSEYGFMQGLAASVVLDPFELTAFYSDNLVDARITRQKNTEFY CHHHHHHHHHHHHEEECCCCCHHHHHHHHHHEECCHHEEEEECCCCEEEEEECCCCCCEE FITSLDDAGYHRTNTEIRRKDNVHEKVSGANLVVHVNNGLLRGSAGGTLLHYAYDEERIL EEEECCCCCCCCCCCHHHHCCCHHHHCCCCEEEEEECCCEEECCCCCEEEEEEECCCEEC PDGTTTSFANLFGFETEFSLGDLSVFAEAVFSEKPDDFSWIAGAEYELIKGLDLQTAIRN CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCCHHHHHHH YGVNYFSPFAGAFAERGDDASNEEGFYIGLEAKFSKKLRAAAYVDWFRFPSLSGDDDYPY CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ASEGYDTRFYLTWKQTPSVVWNLQLQHKEKEEARKQCPIVNGVLVPCKDSKRVYSALPVV CCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCEECCEEEECCCCCHHHHHCCCC SDRARLYCDVMPSRKFHLRTLGEVKRVVNDFRAGDERLFGYLLYQQVHYESGPLSFKGRV CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEE TLFNTDDFDSAIYVYEDDLPLVFNTAMFSGRGKALMLLASWDVMQSMTLGAKYEVAWYTD EEEECCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCEEEEEEEEC RAVFSSGADQRDTSAPGTVTLGCSLRF HHHHCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure ARLHLLQSCRRMFLSVLLLFVCGLTLLPAPGYGRDELQRFLEQREFDGDIEQLALQLED CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH LRSNPLVLNAIDPEELRVLPWLASADIQAVALYRREKGRIRSKSQLEEVLGKEKAAATLP HCCCCEEEECCCHHHEEEEEEECCCCCCEEEEHHHHCCCCCCHHHHHHHHCCCHHHEECC FITFSDRDVPREAGSAWKPSGTLYSRVSWDTTLRDGIRDGRYAGENYKLYNRLQVGRPHL EEEECCCCCCHHCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEECCCCCE KISLVHDKDIGEPDFADFISLSVNGYDFGALKSFVIGNYELNFGQGLLMGQGRFFSKGSD EEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHEEECEEEECCCEEEEECCEECCCCCC PANSVRLASKRLTAYASSSEYGFMQGLAASVVLDPFELTAFYSDNLVDARITRQKNTEFY CHHHHHHHHHHHHEEECCCCCHHHHHHHHHHEECCHHEEEEECCCCEEEEEECCCCCCEE FITSLDDAGYHRTNTEIRRKDNVHEKVSGANLVVHVNNGLLRGSAGGTLLHYAYDEERIL EEEECCCCCCCCCCCHHHHCCCHHHHCCCCEEEEEECCCEEECCCCCEEEEEEECCCEEC PDGTTTSFANLFGFETEFSLGDLSVFAEAVFSEKPDDFSWIAGAEYELIKGLDLQTAIRN CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCCHHHHHHH YGVNYFSPFAGAFAERGDDASNEEGFYIGLEAKFSKKLRAAAYVDWFRFPSLSGDDDYPY CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ASEGYDTRFYLTWKQTPSVVWNLQLQHKEKEEARKQCPIVNGVLVPCKDSKRVYSALPVV CCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCEECCEEEECCCCCHHHHHCCCC SDRARLYCDVMPSRKFHLRTLGEVKRVVNDFRAGDERLFGYLLYQQVHYESGPLSFKGRV CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEE TLFNTDDFDSAIYVYEDDLPLVFNTAMFSGRGKALMLLASWDVMQSMTLGAKYEVAWYTD EEEECCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCEEEEEEEEC RAVFSSGADQRDTSAPGTVTLGCSLRF HHHHCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA