| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ppx [H]
Identifier: 119356335
GI number: 119356335
Start: 546143
End: 547708
Strand: Direct
Name: ppx [H]
Synonym: Cpha266_0498
Alternate gene names: 119356335
Gene position: 546143-547708 (Clockwise)
Preceding gene: 119356332
Following gene: 119356336
Centisome position: 17.43
GC content: 49.11
Gene sequence:
>1566_bases ATGGGTTCTGACGCATTGAGAGTTGCCGCGATTGATCTCGGCACCAACTCTTTTCACATGGTTGTCGTTGAGATTGATCG TGTCAAGGGTATTATTGAGATTGACCGGGTGAAGGATATGATCTGTATCGGGCGCGGCAGCATATCGTCTAAAATGCTTG ACGAATCGGCCATGCTGTCGGGTATTGCGGCATTGAGGAACTTTCTTGTTCTTGCCGGTCAGCACGGCGTCAAGTCTGAA CAGGTTATAGCTTTTGCCACCAGTGCCATACGGGAGGCGAAAAACAGGGATGTGTTTATCCGGAGGGTGAGGGAGGAGAC CGGACTGAAGGTCAGGGTGATTTCAGGCAAGGAGGAGGCCGAGTTTATTTATTACGGAGTACGAAATGCCGTCAAGCTTG GAAATTCATTTGATCTGCTGTTCGATATCGGAGGCGGTTCTGTAGAGTTCGTTATTGCGAACAATAAAGAGGTGAAGTTG CTTGAGAGCCGTAAAATCGGTGTGGCAAGAATGCATGAGCGGTTTATTGGTACCGATCCGGTTTCGGCGCATGAGATCAA GCTTCTTGAGCAGTTTTATGCTGCGGAGATGGTCTCTTCGCTTGAAAAAGCGACACTTCTTGGGGTCAGGAGGGGGATAG CCTCTTCAGGGACCGCTCAGAACATAGCGCGAATGATTCGTTCGTTTGAGGCGCGCGAGAGCGATGTTTCGCTCAATAAC AGCGTGGTTACCCGTCGGGAGTTTCAGCGGTTGTATAAAGCGGTTGTTCCCCTTGGTTCGGTTGACAGGAGGAGGATGAC CGGACTTGACGAGAAACGGGTCGATCTGATTTTACCCGGTCTGATTCTTGTTGACATGATTTTCCGCAAGTTCAATCTTG AAGAGATTGTCATATCGGATTATGCTCTTCGTGAAGGTATGGTGCTTAACTATTTGCAGCGGGGATTTCATCCGCTTTCT GATAACGGCGGCCAGCCGGATATCAGAAGAGAGAGCGTCTATGAACTCGGTTTCCGGTGTGGCTGGAACAGGGAGCATTC AGAACATGTGGCCAAACTTGCCATGCAGTTTTTTGACCAGCTTCGCCTTCTTCATGGTCTTGGTCCGGAGTATCGCGAAC TGCTTGAGTATGCTGCGCTTTTGCACAATATCGGTATTTTTATATCGAATTCTTCTCACCACAAGCATAGTCAATATATT ATCATGAATGGCGAATTGAGGGGATTTTCGCCATCCGAAACGGAGATTATCGGTCATGTTGCACGGTATCACCGCAAGTC CCCCCCATCTGAAAAACACTCCCCCTACAATCAGTTAAAGCCGAAGTACCGCAATGTTGTCGATGTGCTTTCAGGGATTC TTCGTCTTGCCAATGGACTTGAACGGGGTCACCGCCAGAATATCTATGCTGTAAGCACAGCAATAAGCGATCGTGTTATT TCCGTCAGGCTTGAGAGTCACCTTGAACCCGATATCGAGATCTGGGCTGCCGATCAACTGAAGTCCTGGCTTGAAATGGT TTTGTCGCGTTCAATCGTTATCCGCCCCCGCTCTGAGCATGCGTGA
Upstream 100 bases:
>100_bases ACATTACTTAACGCCGGGATAAGGGGAACATTCGCTTTTTCCTTTTCTTTTTTAAACATGTATTTTAAAAGGCGCTTTTT CAACTTTTCCGGTTTACAGT
Downstream 100 bases:
>100_bases TCGGGAATCTTGCAGGATTCAGCGGCTTCTTCTCCATGAGGGGACAGTCTGGCTGGACGAATCGTATGGTGCTCGACATG AGGGCGAAAGCCTGCTTTTT
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MGSDALRVAAIDLGTNSFHMVVVEIDRVKGIIEIDRVKDMICIGRGSISSKMLDESAMLSGIAALRNFLVLAGQHGVKSE QVIAFATSAIREAKNRDVFIRRVREETGLKVRVISGKEEAEFIYYGVRNAVKLGNSFDLLFDIGGGSVEFVIANNKEVKL LESRKIGVARMHERFIGTDPVSAHEIKLLEQFYAAEMVSSLEKATLLGVRRGIASSGTAQNIARMIRSFEARESDVSLNN SVVTRREFQRLYKAVVPLGSVDRRRMTGLDEKRVDLILPGLILVDMIFRKFNLEEIVISDYALREGMVLNYLQRGFHPLS DNGGQPDIRRESVYELGFRCGWNREHSEHVAKLAMQFFDQLRLLHGLGPEYRELLEYAALLHNIGIFISNSSHHKHSQYI IMNGELRGFSPSETEIIGHVARYHRKSPPSEKHSPYNQLKPKYRNVVDVLSGILRLANGLERGHRQNIYAVSTAISDRVI SVRLESHLEPDIEIWAADQLKSWLEMVLSRSIVIRPRSEHA
Sequences:
>Translated_521_residues MGSDALRVAAIDLGTNSFHMVVVEIDRVKGIIEIDRVKDMICIGRGSISSKMLDESAMLSGIAALRNFLVLAGQHGVKSE QVIAFATSAIREAKNRDVFIRRVREETGLKVRVISGKEEAEFIYYGVRNAVKLGNSFDLLFDIGGGSVEFVIANNKEVKL LESRKIGVARMHERFIGTDPVSAHEIKLLEQFYAAEMVSSLEKATLLGVRRGIASSGTAQNIARMIRSFEARESDVSLNN SVVTRREFQRLYKAVVPLGSVDRRRMTGLDEKRVDLILPGLILVDMIFRKFNLEEIVISDYALREGMVLNYLQRGFHPLS DNGGQPDIRRESVYELGFRCGWNREHSEHVAKLAMQFFDQLRLLHGLGPEYRELLEYAALLHNIGIFISNSSHHKHSQYI IMNGELRGFSPSETEIIGHVARYHRKSPPSEKHSPYNQLKPKYRNVVDVLSGILRLANGLERGHRQNIYAVSTAISDRVI SVRLESHLEPDIEIWAADQLKSWLEMVLSRSIVIRPRSEHA >Mature_520_residues GSDALRVAAIDLGTNSFHMVVVEIDRVKGIIEIDRVKDMICIGRGSISSKMLDESAMLSGIAALRNFLVLAGQHGVKSEQ VIAFATSAIREAKNRDVFIRRVREETGLKVRVISGKEEAEFIYYGVRNAVKLGNSFDLLFDIGGGSVEFVIANNKEVKLL ESRKIGVARMHERFIGTDPVSAHEIKLLEQFYAAEMVSSLEKATLLGVRRGIASSGTAQNIARMIRSFEARESDVSLNNS VVTRREFQRLYKAVVPLGSVDRRRMTGLDEKRVDLILPGLILVDMIFRKFNLEEIVISDYALREGMVLNYLQRGFHPLSD NGGQPDIRRESVYELGFRCGWNREHSEHVAKLAMQFFDQLRLLHGLGPEYRELLEYAALLHNIGIFISNSSHHKHSQYII MNGELRGFSPSETEIIGHVARYHRKSPPSEKHSPYNQLKPKYRNVVDVLSGILRLANGLERGHRQNIYAVSTAISDRVIS VRLESHLEPDIEIWAADQLKSWLEMVLSRSIVIRPRSEHA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=425, Percent_Identity=29.6470588235294, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI48994966, Length=460, Percent_Identity=28.2608695652174, Blast_Score=153, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 58826; Mature: 58694
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDALRVAAIDLGTNSFHMVVVEIDRVKGIIEIDRVKDMICIGRGSISSKMLDESAMLS CCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEHHHHHHHHEECCCCHHHHHHHHHHHHH GIAALRNFLVLAGQHGVKSEQVIAFATSAIREAKNRDVFIRRVREETGLKVRVISGKEEA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCC EFIYYGVRNAVKLGNSFDLLFDIGGGSVEFVIANNKEVKLLESRKIGVARMHERFIGTDP EEEEEEHHHHHHCCCCEEEEEEECCCEEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCC VSAHEIKLLEQFYAAEMVSSLEKATLLGVRRGIASSGTAQNIARMIRSFEARESDVSLNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SVVTRREFQRLYKAVVPLGSVDRRRMTGLDEKRVDLILPGLILVDMIFRKFNLEEIVISD HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YALREGMVLNYLQRGFHPLSDNGGQPDIRRESVYELGFRCGWNREHSEHVAKLAMQFFDQ HHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRLLHGLGPEYRELLEYAALLHNIGIFISNSSHHKHSQYIIMNGELRGFSPSETEIIGHV HHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHH ARYHRKSPPSEKHSPYNQLKPKYRNVVDVLSGILRLANGLERGHRQNIYAVSTAISDRVI HHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCEE SVRLESHLEPDIEIWAADQLKSWLEMVLSRSIVIRPRSEHA EEEEHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure GSDALRVAAIDLGTNSFHMVVVEIDRVKGIIEIDRVKDMICIGRGSISSKMLDESAMLS CCCCEEEEEEEECCCCEEEEEEEEECCCCCEEHHHHHHHHEECCCCHHHHHHHHHHHHH GIAALRNFLVLAGQHGVKSEQVIAFATSAIREAKNRDVFIRRVREETGLKVRVISGKEEA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCC EFIYYGVRNAVKLGNSFDLLFDIGGGSVEFVIANNKEVKLLESRKIGVARMHERFIGTDP EEEEEEHHHHHHCCCCEEEEEEECCCEEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCC VSAHEIKLLEQFYAAEMVSSLEKATLLGVRRGIASSGTAQNIARMIRSFEARESDVSLNN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SVVTRREFQRLYKAVVPLGSVDRRRMTGLDEKRVDLILPGLILVDMIFRKFNLEEIVISD HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH YALREGMVLNYLQRGFHPLSDNGGQPDIRRESVYELGFRCGWNREHSEHVAKLAMQFFDQ HHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRLLHGLGPEYRELLEYAALLHNIGIFISNSSHHKHSQYIIMNGELRGFSPSETEIIGHV HHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHH ARYHRKSPPSEKHSPYNQLKPKYRNVVDVLSGILRLANGLERGHRQNIYAVSTAISDRVI HHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCEE SVRLESHLEPDIEIWAADQLKSWLEMVLSRSIVIRPRSEHA EEEEHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]