| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is hisA
Identifier: 119356329
GI number: 119356329
Start: 539510
End: 540280
Strand: Direct
Name: hisA
Synonym: Cpha266_0492
Alternate gene names: 119356329
Gene position: 539510-540280 (Clockwise)
Preceding gene: 119356328
Following gene: 119356330
Centisome position: 17.22
GC content: 46.82
Gene sequence:
>771_bases ATGCTGATAATTCCTGCTATAGACATTAAGGACGGAAGATGTGTGCGGTTGACTCGTGGTGATTTCAACCAGCAGAAAAT CTACCTCGACAATCCCTGCGACATGGCCATCATCTGGAGAAAACAGAATGCCAAGATGCTTCATGTCGTTGATCTGGATG CTGCATTGACCGGCGAAATGGTCAATTTTCTGAAAATAGAGCAAATCGTACGCGAACTGGATATTCCTTTGCAGGTTGGG GGAGGAATCCGTTCTCTCGATGCGGTTAAGCGATATCTTGATATCGGTGTCGGCCGGGTGGTGATAGGGTCGGCAGCGGT GACAAATCCCGGGTTGATTGAAGAAGTGCTGAAAATATATCGGCCCTCGAAAATTGTTGTCGGGATTGACGCGGAGAATG GCATCCCTAAAATCAAGGGGTGGACAGAAAGCTGTGGTATGAAAGATTACGAGCTGGGGCTTGAGATGAAGCAAATGGGT ATTGAACGCGTTGTCTATACCGATATTTCAAAAGACGGCATGATGCAGGGGTTTGGTTACGAAAGCACCAAGCGGTTTGC CGAAATGACCGGCATGAAAGTAACTGCTTCCGGTGGCGTTACCAGTTCAGATGACCTCATGAAGCTTGTTGGCTTGCAGC AGTACGGGGTTGATTCCGTTATTATCGGAAAAGCCCTGTACGAGTGTAATTTTCCGTGCCAGGAGCTTTGGTATAATTTT GAAGAGGATATCTGTATTGATCATAACTTTTCCACAGCAAGGAAGAAGTGA
Upstream 100 bases:
>100_bases ATTTTTGCAGTCCAGTTTCATCCTGAAAAAAGTTCCGAGGCCGGTTTACAGGTGCTGAAGAATTTTGCAGGGTGTTAAGA ATCGTTTGTTTTGTTTTTTT
Downstream 100 bases:
>100_bases TGCTGTGATCGGGGCAGAACGGGATCTCCCTCATTCAACCATCCTGACTAACTATGGCGCCCGAAGAGGATATCGTGCTG AAACAGCAGGTTGAGGCTCT
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLIIPAIDIKDGRCVRLTRGDFNQQKIYLDNPCDMAIIWRKQNAKMLHVVDLDAALTGEMVNFLKIEQIVRELDIPLQVG GGIRSLDAVKRYLDIGVGRVVIGSAAVTNPGLIEEVLKIYRPSKIVVGIDAENGIPKIKGWTESCGMKDYELGLEMKQMG IERVVYTDISKDGMMQGFGYESTKRFAEMTGMKVTASGGVTSSDDLMKLVGLQQYGVDSVIIGKALYECNFPCQELWYNF EEDICIDHNFSTARKK
Sequences:
>Translated_256_residues MLIIPAIDIKDGRCVRLTRGDFNQQKIYLDNPCDMAIIWRKQNAKMLHVVDLDAALTGEMVNFLKIEQIVRELDIPLQVG GGIRSLDAVKRYLDIGVGRVVIGSAAVTNPGLIEEVLKIYRPSKIVVGIDAENGIPKIKGWTESCGMKDYELGLEMKQMG IERVVYTDISKDGMMQGFGYESTKRFAEMTGMKVTASGGVTSSDDLMKLVGLQQYGVDSVIIGKALYECNFPCQELWYNF EEDICIDHNFSTARKK >Mature_256_residues MLIIPAIDIKDGRCVRLTRGDFNQQKIYLDNPCDMAIIWRKQNAKMLHVVDLDAALTGEMVNFLKIEQIVRELDIPLQVG GGIRSLDAVKRYLDIGVGRVVIGSAAVTNPGLIEEVLKIYRPSKIVVGIDAENGIPKIKGWTESCGMKDYELGLEMKQMG IERVVYTDISKDGMMQGFGYESTKRFAEMTGMKVTASGGVTSSDDLMKLVGLQQYGVDSVIIGKALYECNFPCQELWYNF EEDICIDHNFSTARKK
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=250, Percent_Identity=32.8, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1788336, Length=216, Percent_Identity=26.8518518518519, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_CHLPD (A1BDS2)
Other databases:
- EMBL: CP000492 - RefSeq: YP_910973.1 - ProteinModelPortal: A1BDS2 - SMR: A1BDS2 - STRING: A1BDS2 - GeneID: 4569262 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0492 - NMPDR: fig|290317.7.peg.510 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 28587; Mature: 28587
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIIPAIDIKDGRCVRLTRGDFNQQKIYLDNPCDMAIIWRKQNAKMLHVVDLDAALTGEM CEEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCHHHHHHH VNFLKIEQIVRELDIPLQVGGGIRSLDAVKRYLDIGVGRVVIGSAAVTNPGLIEEVLKIY HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHH RPSKIVVGIDAENGIPKIKGWTESCGMKDYELGLEMKQMGIERVVYTDISKDGMMQGFGY CCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCC ESTKRFAEMTGMKVTASGGVTSSDDLMKLVGLQQYGVDSVIIGKALYECNFPCQELWYNF HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCHHHHCCCC EEDICIDHNFSTARKK CCCEEEECCCHHCCCC >Mature Secondary Structure MLIIPAIDIKDGRCVRLTRGDFNQQKIYLDNPCDMAIIWRKQNAKMLHVVDLDAALTGEM CEEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCHHHHHHH VNFLKIEQIVRELDIPLQVGGGIRSLDAVKRYLDIGVGRVVIGSAAVTNPGLIEEVLKIY HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHH RPSKIVVGIDAENGIPKIKGWTESCGMKDYELGLEMKQMGIERVVYTDISKDGMMQGFGY CCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCC ESTKRFAEMTGMKVTASGGVTSSDDLMKLVGLQQYGVDSVIIGKALYECNFPCQELWYNF HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCHHHHCCCC EEDICIDHNFSTARKK CCCEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA