| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ubiE [H]
Identifier: 119356315
GI number: 119356315
Start: 527206
End: 527964
Strand: Reverse
Name: ubiE [H]
Synonym: Cpha266_0478
Alternate gene names: 119356315
Gene position: 527964-527206 (Counterclockwise)
Preceding gene: 119356316
Following gene: 119356309
Centisome position: 16.85
GC content: 49.54
Gene sequence:
>759_bases ATGACGTTTACGGAAAAAAAAGCTGATATGCTGATGAGCCACCCAAAAGAGACCGCCAAATCCCTGAACCAGACAAAGTC CCGTTCATCAATTCGGGAGATGTTTGACGAGGTTGCCCCAACCTACGACTTTCTCAACCACCTCCTGAGTCTCGGCATAG ATAACTACTGGCGGGCAGCCGCAACGGGAAGGGCAAAAAAACTGCTCAAGAACGTCCCGCAGCCCCGGATTCTCGACGTC GCAACCGGCACAGGAGATCTTGCCGCATCCATAGCAAAACTTCCTGGCGCAAAGGTAACCGGCCTCGATCTCTCTCCTGA AATGCTTGAACTGGCCAGAAAAAAATATCCGGCAATCACCTTTCTTGAAGGATATGCGGAAAAGCTCCCTTTCGATACGG CAAGTTTCGATGCCGTAAGCGCAGGATTCGGCGTAAGAAACTTTGAAAATCTGCAACAGGGGATGAGCGAATTCCACAGG GTTCTCAAGCCGGGCGGCTATACGTTCATCATTGAGCCGATGATCCCGAGAAATCCTCTCATGAAAAAGCTCTATCTGAT CTATTTTAAAAAAGTCCTGCCGAAAATCGCGGCACTGTTCAGCAAATCAACCTTTGCCTACGACTATCTCCCCCACTCCG TCGAGCAGTTCCCGCAGGCAGAAGCATTCAGCGAAATCCTCAAAAAAGCCGGATTTCGAGCCGTCAGCTATTTCCCCATG ACCTTTGAAACATCAATTCTCTACGTAGCCGGAAAATAA
Upstream 100 bases:
>100_bases AAAGGCGGAGCGTGCCATGTCGGCTATCACTCCTGTTTCTATCGAAAAGTAAAAGAAACTCTTGATATGGAAATCTGTGA CACCCTGATGTTCAATCCGG
Downstream 100 bases:
>100_bases ACCGCGCTGCGCACGATGGAACAGCAATAACAGGGCAGGCACACAGAGGCCTGCCCATACAAACGGCAGCTCATCCCGAC AGGCATAACAACGTTACCCG
Product: demethylmenaquinone methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTFTEKKADMLMSHPKETAKSLNQTKSRSSIREMFDEVAPTYDFLNHLLSLGIDNYWRAAATGRAKKLLKNVPQPRILDV ATGTGDLAASIAKLPGAKVTGLDLSPEMLELARKKYPAITFLEGYAEKLPFDTASFDAVSAGFGVRNFENLQQGMSEFHR VLKPGGYTFIIEPMIPRNPLMKKLYLIYFKKVLPKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAVSYFPM TFETSILYVAGK
Sequences:
>Translated_252_residues MTFTEKKADMLMSHPKETAKSLNQTKSRSSIREMFDEVAPTYDFLNHLLSLGIDNYWRAAATGRAKKLLKNVPQPRILDV ATGTGDLAASIAKLPGAKVTGLDLSPEMLELARKKYPAITFLEGYAEKLPFDTASFDAVSAGFGVRNFENLQQGMSEFHR VLKPGGYTFIIEPMIPRNPLMKKLYLIYFKKVLPKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAVSYFPM TFETSILYVAGK >Mature_251_residues TFTEKKADMLMSHPKETAKSLNQTKSRSSIREMFDEVAPTYDFLNHLLSLGIDNYWRAAATGRAKKLLKNVPQPRILDVA TGTGDLAASIAKLPGAKVTGLDLSPEMLELARKKYPAITFLEGYAEKLPFDTASFDAVSAGFGVRNFENLQQGMSEFHRV LKPGGYTFIIEPMIPRNPLMKKLYLIYFKKVLPKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAVSYFPMT FETSILYVAGK
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG2226
COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI116063536, Length=278, Percent_Identity=30.2158273381295, Blast_Score=137, Evalue=9e-33, Organism=Escherichia coli, GI48994983, Length=223, Percent_Identity=31.8385650224215, Blast_Score=123, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17557039, Length=238, Percent_Identity=29.4117647058824, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6323526, Length=249, Percent_Identity=30.9236947791165, Blast_Score=126, Evalue=4e-30, Organism=Drosophila melanogaster, GI24641702, Length=244, Percent_Identity=31.1475409836066, Blast_Score=123, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.-
Molecular weight: Translated: 28244; Mature: 28113
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS01183 UBIE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTEKKADMLMSHPKETAKSLNQTKSRSSIREMFDEVAPTYDFLNHLLSLGIDNYWRAA CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH ATGRAKKLLKNVPQPRILDVATGTGDLAASIAKLPGAKVTGLDLSPEMLELARKKYPAIT HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCHH FLEGYAEKLPFDTASFDAVSAGFGVRNFENLQQGMSEFHRVLKPGGYTFIIEPMIPRNPL HHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH MKKLYLIYFKKVLPKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAVSYFPM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHHHHHHHHCCCCEEEECCE TFETSILYVAGK EEECEEEEEECC >Mature Secondary Structure TFTEKKADMLMSHPKETAKSLNQTKSRSSIREMFDEVAPTYDFLNHLLSLGIDNYWRAA CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH ATGRAKKLLKNVPQPRILDVATGTGDLAASIAKLPGAKVTGLDLSPEMLELARKKYPAIT HHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCHH FLEGYAEKLPFDTASFDAVSAGFGVRNFENLQQGMSEFHRVLKPGGYTFIIEPMIPRNPL HHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHH MKKLYLIYFKKVLPKIAALFSKSTFAYDYLPHSVEQFPQAEAFSEILKKAGFRAVSYFPM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHHHHHHHHCCCCEEEECCE TFETSILYVAGK EEECEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]