| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356235
Identifier: 119356235
GI number: 119356235
Start: 438858
End: 439589
Strand: Reverse
Name: 119356235
Synonym: Cpha266_0396
Alternate gene names: NA
Gene position: 439589-438858 (Counterclockwise)
Preceding gene: 119356236
Following gene: 119356227
Centisome position: 14.03
GC content: 47.27
Gene sequence:
>732_bases ATGAAAAAATCACTTTCACTGCTTGCAGTTTTGGCAGTTGTTGGATTTGCAAGCACGCCGGTTCAGGCTGCAGACCACTA CGTAAGCGGCATGGCTGGAATCTCATGGATGCAGGACTCAAGTATTGACCTTCCACTAAATCTTAATGAAGTTTTTGGAG TAGGTATTGATCTTGGTTATAGCAGTGGCTTTACTGCAGTTGGCGCAGTCGGTTGTGATTATGGCAGCACAAGACTTGAG GCTGAAGTTGGTTATCAGACAAACGACATCGACTCAATAACCGGATCATTCGACGGTGACAGTGCATCTTTGGCACTTTC AGGCAATGCGAAGGTTCTCTCCCTGATGGCAAACGGCTTCTACGATTTCGATCTTGGTGGCGTTGAACTCTATGCAATGG CCGGTATCGGTGTTGCCCAGGTCAGCATCAATGATCTTACACTGGCCGACACCAACGATCTCGGCATAAGTGCTGATGAC ATTGATGATGCAAATGAGTATCTGTCAAGACGTTTAGGCGCTCCTGTTGATTTAAACGCTCTTGGACTTAACGTCAATGA GACAACTCTTGCCTATCAGGTTGGAGCAGGTCTTGCTGTACCGATCGGCGACGGAATCATGCTTGATGCCCGTTACCGTT ACTTTGCAACAACTGACTTCACCATGCCATTGGACCTCAATACCAACATATCGAGCCACAGTGCTCTGCTTGGTCTTAGA GTCAACCTGTAA
Upstream 100 bases:
>100_bases GATAATGAGTTGAAACCGTATATTTGACATGAATGAACACACAGATTTGTTTGTTTTTTAAATCGTTTTCTGTGAACAAA AAAAACCTATGGAGGATACA
Downstream 100 bases:
>100_bases GCATCAGGTTATACTGTAATGCAGAAAAGGAGGCTTCGGCCTCCTTTTTTTTTGTAAATTTCTCATATTTTTTTCACGAA CTCACGACAGTCTGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Porin Opacity Type; Outer Surface Protein; Tia Invasion Determinant-Related Protein
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKSLSLLAVLAVVGFASTPVQAADHYVSGMAGISWMQDSSIDLPLNLNEVFGVGIDLGYSSGFTAVGAVGCDYGSTRLE AEVGYQTNDIDSITGSFDGDSASLALSGNAKVLSLMANGFYDFDLGGVELYAMAGIGVAQVSINDLTLADTNDLGISADD IDDANEYLSRRLGAPVDLNALGLNVNETTLAYQVGAGLAVPIGDGIMLDARYRYFATTDFTMPLDLNTNISSHSALLGLR VNL
Sequences:
>Translated_243_residues MKKSLSLLAVLAVVGFASTPVQAADHYVSGMAGISWMQDSSIDLPLNLNEVFGVGIDLGYSSGFTAVGAVGCDYGSTRLE AEVGYQTNDIDSITGSFDGDSASLALSGNAKVLSLMANGFYDFDLGGVELYAMAGIGVAQVSINDLTLADTNDLGISADD IDDANEYLSRRLGAPVDLNALGLNVNETTLAYQVGAGLAVPIGDGIMLDARYRYFATTDFTMPLDLNTNISSHSALLGLR VNL >Mature_243_residues MKKSLSLLAVLAVVGFASTPVQAADHYVSGMAGISWMQDSSIDLPLNLNEVFGVGIDLGYSSGFTAVGAVGCDYGSTRLE AEVGYQTNDIDSITGSFDGDSASLALSGNAKVLSLMANGFYDFDLGGVELYAMAGIGVAQVSINDLTLADTNDLGISADD IDDANEYLSRRLGAPVDLNALGLNVNETTLAYQVGAGLAVPIGDGIMLDARYRYFATTDFTMPLDLNTNISSHSALLGLR VNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25329; Mature: 25329
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLSLLAVLAVVGFASTPVQAADHYVSGMAGISWMQDSSIDLPLNLNEVFGVGIDLGY CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEHHHHEEEEEEECC SSGFTAVGAVGCDYGSTRLEAEVGYQTNDIDSITGSFDGDSASLALSGNAKVLSLMANGF CCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC YDFDLGGVELYAMAGIGVAQVSINDLTLADTNDLGISADDIDDANEYLSRRLGAPVDLNA EEECCCCEEEEEEECCEEEEEEECEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE LGLNVNETTLAYQVGAGLAVPIGDGIMLDARYRYFATTDFTMPLDLNTNISSHSALLGLR EECCCCCEEEEEEECCCEEEECCCCEEEECEEEEEEEECCEEEEECCCCCCCCCEEEEEE VNL EEC >Mature Secondary Structure MKKSLSLLAVLAVVGFASTPVQAADHYVSGMAGISWMQDSSIDLPLNLNEVFGVGIDLGY CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEHHHHEEEEEEECC SSGFTAVGAVGCDYGSTRLEAEVGYQTNDIDSITGSFDGDSASLALSGNAKVLSLMANGF CCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC YDFDLGGVELYAMAGIGVAQVSINDLTLADTNDLGISADDIDDANEYLSRRLGAPVDLNA EEECCCCEEEEEEECCEEEEEEECEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE LGLNVNETTLAYQVGAGLAVPIGDGIMLDARYRYFATTDFTMPLDLNTNISSHSALLGLR EECCCCCEEEEEEECCCEEEECCCCEEEECEEEEEEEECCEEEEECCCCCCCCCEEEEEE VNL EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA