Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is yaeT [H]

Identifier: 119356236

GI number: 119356236

Start: 439729

End: 442221

Strand: Reverse

Name: yaeT [H]

Synonym: Cpha266_0397

Alternate gene names: 119356236

Gene position: 442221-439729 (Counterclockwise)

Preceding gene: 119356237

Following gene: 119356235

Centisome position: 14.11

GC content: 48.5

Gene sequence:

>2493_bases
ATGAAAAAAATGCAAAAACTGATAACCCTGGTACTGGTAGCCCTTGCCGTAAACGCTACAGGACAAACTGCCGAAGCTAA
AAGCAAGCCCGTAAAACAATCGGTAACAGCAACACAGGCAAAAACACCCGCGGAGAAAAAAGATCTCTATACGATAAGCG
CAATTTCCTTCACCGGTCTTCAATCGCTTAACGAGCAGGAACTTATTGCAAGTCTTCCCATAAAAATCGGCAACAACATC
GCGGTACCCGGGGCTGAACTGTCAGCAACCATGCAATACCTCTGGAATCTGCAGGTTTTCAAAAATATCACCCTGGAAAA
ATCCAATCCCGGCACCAAAAACGTAGCGCTGCACTTTATTGTCGAAGAACAGCCGTTACTTGAAGAGGTCGTTTTTAAAG
GCAACGAAAAATTCGACCTTGACAAACTGCAGAAAACCGCCGACATTCAAACAGGTAAAAAGCTCAGTGAGCAGGAACTG
CTCACGGCCGCAAACAAAATAGAAAAGCTCTATGCCGACAAGGGGTATCTGACTGCAGGAGCGGAATACAAACTGGAGGC
TATCGGAAAAAACAAGGTCAAAGCAGTTTTCACTATCACTGAAGGCCGGAAGGTAGTTATTGAAAAAATCCGTTTCCACG
GCAACAATGCCTTCAGCCAGGGCAAGCTCAGAGGGGTGTTCAAGGAGACTACCCAAAACTCATGGTGGAGAAAAATCTTT
GGAGCCCCCAAACTCGACAAGGATAAATTCGCCACCGACAAGGATCTCCTCGTCGATTTTTATCGGGAAAACGGTTATCG
GGACGCAAAAGTTGTCAGCGACTCCATCAGCTATACCCCCGATAATAAAGGTCTCTTTCTTGATATCACGATAGAGGAGG
GACCGAAATACCATATCGGCACCATAACATGGACAGGAAACTCCAAAGATTTCGCCACCACAGAAATCCTTGAAAAAACA
TTCGGAATAAAAACCGGCGATCTCTATAACGCAAAACTCATCCAGGAAAGACTGAACTTCTCACAGGACAACAGCGATGT
AAGCTCGATCTACCTTGACAGGGGGTACCTCTCCTACAGGGCCAACCTTGACGAGGTGGTCGTGAATCCTGACACGGTCA
ATCTTCTCATCAGCATTCGTGAAGGCGAACAGTATCAGTTGAATCTGGTGAACATCACCGGCAACACCAAAACCAAAGAC
CATGTCATCCGCCGTGAATTGTACACCATCCCCGGTGAAATGTTCAGCCGCAAAAACGTCATCCGCAGTATCAGGGAGCT
TAACATGCTCAACTACTTTGATGCTGAAAAACTTGCTCCCGAAATTCAGCCCAACGAAGAGAATAACACAGTCGACCTGA
CCTATTCGGTATCTGAAAAACAGAGCGACACCTTCAACGCATCGATCGGATATGGAGGATCGAGCGGCTTTACCGGCACA
CTCGGCGTCACCTTCAACAACTTCTCGCTGCAGGATATTTTTGATGCCGATGCCTACAGACCTCTTCCGCATGGTGACGG
TCAGAAACTCTCCTTCCAATGGCAGTTCGGCAGCGACAACTACCGCACGCTTGCCCTGTCGTTTACGGAACCATGGGCAT
TCGGAGGCCCGACAACCGTTGGCTTTTCAGCCTTTAAAACACACCGCACCTATGACTATACAGGCACAGACTCATCGATT
GAGAACAAAACGATCGATCAGTACGGAACCATTCTCACTATCGGCAGACGTCTGACCTGGCCCGACGACTATTTCGCCGT
CGGACTTAAACTGAAATACCTGCACAACAAAGGCGGATTTGTGAGCTTTATCAACGAAACAGGTATTAACGTTCCGGATG
AAGCCGACGAGTATTCAATCACCGGAACAATATCACGCAACAGCATCGACAGCCCGATCTACCCGCGCCGAGGCAGCAAA
AACACACTCACCGCCCAGCTTGCAGGGGGCCCTCTTCCCGGCACTATCGACTTCTATAAATTCACAGGAAACTCAACCTG
GTTTTTCCCGCTGTCGAGAAAACTGGTGCTGAACATGTCTGCCCAGGCTGGATACCTCTCAACCTTTAATAAAAGCGACT
ACATCCCCTATACAGAGTATTTCTATATGGGAGGAAGCGGCATGTCTTCTCTGCCCACCGTTCCGATGCGCGGTTACGAC
GACCGCAGTTTCGGCGCACTGCTTGAAACCGATTCCGACCTGTATGGCGGCACCATTTACACAAAGTTCACAACAGAACT
TCGCTATCCTATAACGCTCTCGCCATCCGTAAGCGTCTATGGACTCGCTTTCTTCGATGCAGGAAACCTCTGGCAAGACA
GTGAATCCGTTGATTTCAGCGACCTCAAAAAGTCCGTCGGCGTAGGACTCAGGGTTTATCTTCCGATTATCGGAATGGTT
GGCCTTGATTACGGATACGGTATGGACACCGTGCCCGGAGACATGGAAAAAGGATGGGGATTCATGTTCACTTTTGGCAC
ATCGACAGAGTGA

Upstream 100 bases:

>100_bases
ATCAAAACAGAGAAAGAAGGTTTGGCCAGACAAGTGAACAAATTCAGAAAAAAAACACAGCAAACAGCAAGATTTAACTC
TGACCGATCCGAAAGATTCT

Downstream 100 bases:

>100_bases
AAGATCGGAAACTGTTTCTTTTACTCACTTTTTTTTTGTGATAATGAGTTGAAACCGTATATTTGACATGAATGAACACA
CAGATTTGTTTGTTTTTTAA

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MKKMQKLITLVLVALAVNATGQTAEAKSKPVKQSVTATQAKTPAEKKDLYTISAISFTGLQSLNEQELIASLPIKIGNNI
AVPGAELSATMQYLWNLQVFKNITLEKSNPGTKNVALHFIVEEQPLLEEVVFKGNEKFDLDKLQKTADIQTGKKLSEQEL
LTAANKIEKLYADKGYLTAGAEYKLEAIGKNKVKAVFTITEGRKVVIEKIRFHGNNAFSQGKLRGVFKETTQNSWWRKIF
GAPKLDKDKFATDKDLLVDFYRENGYRDAKVVSDSISYTPDNKGLFLDITIEEGPKYHIGTITWTGNSKDFATTEILEKT
FGIKTGDLYNAKLIQERLNFSQDNSDVSSIYLDRGYLSYRANLDEVVVNPDTVNLLISIREGEQYQLNLVNITGNTKTKD
HVIRRELYTIPGEMFSRKNVIRSIRELNMLNYFDAEKLAPEIQPNEENNTVDLTYSVSEKQSDTFNASIGYGGSSGFTGT
LGVTFNNFSLQDIFDADAYRPLPHGDGQKLSFQWQFGSDNYRTLALSFTEPWAFGGPTTVGFSAFKTHRTYDYTGTDSSI
ENKTIDQYGTILTIGRRLTWPDDYFAVGLKLKYLHNKGGFVSFINETGINVPDEADEYSITGTISRNSIDSPIYPRRGSK
NTLTAQLAGGPLPGTIDFYKFTGNSTWFFPLSRKLVLNMSAQAGYLSTFNKSDYIPYTEYFYMGGSGMSSLPTVPMRGYD
DRSFGALLETDSDLYGGTIYTKFTTELRYPITLSPSVSVYGLAFFDAGNLWQDSESVDFSDLKKSVGVGLRVYLPIIGMV
GLDYGYGMDTVPGDMEKGWGFMFTFGTSTE

Sequences:

>Translated_830_residues
MKKMQKLITLVLVALAVNATGQTAEAKSKPVKQSVTATQAKTPAEKKDLYTISAISFTGLQSLNEQELIASLPIKIGNNI
AVPGAELSATMQYLWNLQVFKNITLEKSNPGTKNVALHFIVEEQPLLEEVVFKGNEKFDLDKLQKTADIQTGKKLSEQEL
LTAANKIEKLYADKGYLTAGAEYKLEAIGKNKVKAVFTITEGRKVVIEKIRFHGNNAFSQGKLRGVFKETTQNSWWRKIF
GAPKLDKDKFATDKDLLVDFYRENGYRDAKVVSDSISYTPDNKGLFLDITIEEGPKYHIGTITWTGNSKDFATTEILEKT
FGIKTGDLYNAKLIQERLNFSQDNSDVSSIYLDRGYLSYRANLDEVVVNPDTVNLLISIREGEQYQLNLVNITGNTKTKD
HVIRRELYTIPGEMFSRKNVIRSIRELNMLNYFDAEKLAPEIQPNEENNTVDLTYSVSEKQSDTFNASIGYGGSSGFTGT
LGVTFNNFSLQDIFDADAYRPLPHGDGQKLSFQWQFGSDNYRTLALSFTEPWAFGGPTTVGFSAFKTHRTYDYTGTDSSI
ENKTIDQYGTILTIGRRLTWPDDYFAVGLKLKYLHNKGGFVSFINETGINVPDEADEYSITGTISRNSIDSPIYPRRGSK
NTLTAQLAGGPLPGTIDFYKFTGNSTWFFPLSRKLVLNMSAQAGYLSTFNKSDYIPYTEYFYMGGSGMSSLPTVPMRGYD
DRSFGALLETDSDLYGGTIYTKFTTELRYPITLSPSVSVYGLAFFDAGNLWQDSESVDFSDLKKSVGVGLRVYLPIIGMV
GLDYGYGMDTVPGDMEKGWGFMFTFGTSTE
>Mature_830_residues
MKKMQKLITLVLVALAVNATGQTAEAKSKPVKQSVTATQAKTPAEKKDLYTISAISFTGLQSLNEQELIASLPIKIGNNI
AVPGAELSATMQYLWNLQVFKNITLEKSNPGTKNVALHFIVEEQPLLEEVVFKGNEKFDLDKLQKTADIQTGKKLSEQEL
LTAANKIEKLYADKGYLTAGAEYKLEAIGKNKVKAVFTITEGRKVVIEKIRFHGNNAFSQGKLRGVFKETTQNSWWRKIF
GAPKLDKDKFATDKDLLVDFYRENGYRDAKVVSDSISYTPDNKGLFLDITIEEGPKYHIGTITWTGNSKDFATTEILEKT
FGIKTGDLYNAKLIQERLNFSQDNSDVSSIYLDRGYLSYRANLDEVVVNPDTVNLLISIREGEQYQLNLVNITGNTKTKD
HVIRRELYTIPGEMFSRKNVIRSIRELNMLNYFDAEKLAPEIQPNEENNTVDLTYSVSEKQSDTFNASIGYGGSSGFTGT
LGVTFNNFSLQDIFDADAYRPLPHGDGQKLSFQWQFGSDNYRTLALSFTEPWAFGGPTTVGFSAFKTHRTYDYTGTDSSI
ENKTIDQYGTILTIGRRLTWPDDYFAVGLKLKYLHNKGGFVSFINETGINVPDEADEYSITGTISRNSIDSPIYPRRGSK
NTLTAQLAGGPLPGTIDFYKFTGNSTWFFPLSRKLVLNMSAQAGYLSTFNKSDYIPYTEYFYMGGSGMSSLPTVPMRGYD
DRSFGALLETDSDLYGGTIYTKFTTELRYPITLSPSVSVYGLAFFDAGNLWQDSESVDFSDLKKSVGVGLRVYLPIIGMV
GLDYGYGMDTVPGDMEKGWGFMFTFGTSTE

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=843, Percent_Identity=23.2502965599051, Blast_Score=175, Evalue=9e-45,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 92642; Mature: 92642

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMQKLITLVLVALAVNATGQTAEAKSKPVKQSVTATQAKTPAEKKDLYTISAISFTGL
CHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEHHH
QSLNEQELIASLPIKIGNNIAVPGAELSATMQYLWNLQVFKNITLEKSNPGTKNVALHFI
HCCCHHHHHHHCCEEECCEEECCCHHHHHHHHHHHCEEEHHEEEEECCCCCCCCEEEEEE
VEEQPLLEEVVFKGNEKFDLDKLQKTADIQTGKKLSEQELLTAANKIEKLYADKGYLTAG
ECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
AEYKLEAIGKNKVKAVFTITEGRKVVIEKIRFHGNNAFSQGKLRGVFKETTQNSWWRKIF
CCEEEEECCCCCEEEEEEEECCCEEEEEEHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
GAPKLDKDKFATDKDLLVDFYRENGYRDAKVVSDSISYTPDNKGLFLDITIEEGPKYHIG
CCCCCCHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEE
TITWTGNSKDFATTEILEKTFGIKTGDLYNAKLIQERLNFSQDNSDVSSIYLDRGYLSYR
EEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCEEEEE
ANLDEVVVNPDTVNLLISIREGEQYQLNLVNITGNTKTKDHVIRRELYTIPGEMFSRKNV
CCCCEEEECCCEEEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHH
IRSIRELNMLNYFDAEKLAPEIQPNEENNTVDLTYSVSEKQSDTFNASIGYGGSSGFTGT
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEE
LGVTFNNFSLQDIFDADAYRPLPHGDGQKLSFQWQFGSDNYRTLALSFTEPWAFGGPTTV
EEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCC
GFSAFKTHRTYDYTGTDSSIENKTIDQYGTILTIGRRLTWPDDYFAVGLKLKYLHNKGGF
CCHHHHCCCEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCE
VSFINETGINVPDEADEYSITGTISRNSIDSPIYPRRGSKNTLTAQLAGGPLPGTIDFYK
EEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE
FTGNSTWFFPLSRKLVLNMSAQAGYLSTFNKSDYIPYTEYFYMGGSGMSSLPTVPMRGYD
EECCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
DRSFGALLETDSDLYGGTIYTKFTTELRYPITLSPSVSVYGLAFFDAGNLWQDSESVDFS
CCCCCEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHH
DLKKSVGVGLRVYLPIIGMVGLDYGYGMDTVPGDMEKGWGFMFTFGTSTE
HHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCCC
>Mature Secondary Structure
MKKMQKLITLVLVALAVNATGQTAEAKSKPVKQSVTATQAKTPAEKKDLYTISAISFTGL
CHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEHHH
QSLNEQELIASLPIKIGNNIAVPGAELSATMQYLWNLQVFKNITLEKSNPGTKNVALHFI
HCCCHHHHHHHCCEEECCEEECCCHHHHHHHHHHHCEEEHHEEEEECCCCCCCCEEEEEE
VEEQPLLEEVVFKGNEKFDLDKLQKTADIQTGKKLSEQELLTAANKIEKLYADKGYLTAG
ECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC
AEYKLEAIGKNKVKAVFTITEGRKVVIEKIRFHGNNAFSQGKLRGVFKETTQNSWWRKIF
CCEEEEECCCCCEEEEEEEECCCEEEEEEHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
GAPKLDKDKFATDKDLLVDFYRENGYRDAKVVSDSISYTPDNKGLFLDITIEEGPKYHIG
CCCCCCHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEE
TITWTGNSKDFATTEILEKTFGIKTGDLYNAKLIQERLNFSQDNSDVSSIYLDRGYLSYR
EEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCEEEEE
ANLDEVVVNPDTVNLLISIREGEQYQLNLVNITGNTKTKDHVIRRELYTIPGEMFSRKNV
CCCCEEEECCCEEEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHH
IRSIRELNMLNYFDAEKLAPEIQPNEENNTVDLTYSVSEKQSDTFNASIGYGGSSGFTGT
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCEEE
LGVTFNNFSLQDIFDADAYRPLPHGDGQKLSFQWQFGSDNYRTLALSFTEPWAFGGPTTV
EEEEEECCCHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCC
GFSAFKTHRTYDYTGTDSSIENKTIDQYGTILTIGRRLTWPDDYFAVGLKLKYLHNKGGF
CCHHHHCCCEEEECCCCCCCCCCCHHHCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCE
VSFINETGINVPDEADEYSITGTISRNSIDSPIYPRRGSKNTLTAQLAGGPLPGTIDFYK
EEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE
FTGNSTWFFPLSRKLVLNMSAQAGYLSTFNKSDYIPYTEYFYMGGSGMSSLPTVPMRGYD
EECCCEEEEECCCEEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
DRSFGALLETDSDLYGGTIYTKFTTELRYPITLSPSVSVYGLAFFDAGNLWQDSESVDFS
CCCCCEEEECCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHH
DLKKSVGVGLRVYLPIIGMVGLDYGYGMDTVPGDMEKGWGFMFTFGTSTE
HHHHHHCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA