| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is folC [H]
Identifier: 119356230
GI number: 119356230
Start: 432457
End: 433743
Strand: Direct
Name: folC [H]
Synonym: Cpha266_0391
Alternate gene names: 119356230
Gene position: 432457-433743 (Clockwise)
Preceding gene: 119356229
Following gene: 119356231
Centisome position: 13.8
GC content: 49.49
Gene sequence:
>1287_bases GTGAATTACCAGGAAGCACTTGATTTTCTCTATCCTCTGCACCGTTTCGGTATCAAGCCCGGTCTTGAAAGGGTTTTCGG TCTGCTTGCTGTTCTCGGTTCACCACATCGGCGATTGGGTACGATTGTTCATGTTTCCGGTACTAACGGGAAAGGAACAA CAGCTGCTGCAATTGCTGCGATTTTTCAGGCAGCCGGCAAAAAGACTGCACTCTACACCTCGCCGCATCTGGTTGATTTT ACTGAAAGGATGCGTATCAACGGTGGGTGTATACCTCATGAGCTTGTTGCAACGTACTGCTCTCTTATCAAGTCCAGGGT TGAAGAGAGTCATACAACTTTTTTTGAAGCAACAACAGCCATTGCTTTTGCCTGGTTTGCTTCCGAACACGTTGAGGTAA CAATTGTTGAGACCGGTATGGGCGGGAGACTTGATGCTACTAACGTTGTTCATGCTGATTACGTAGCGATTACTTCAATA GGGCAGGATCATACCGCATGGCTTGGTTCGACCCCTGCGTTGATTGCTGCGGAAAAAGCGGCGATCATTAAAAAAGGATC GCAAGTATTTTCTGCCGTAACAGATTCTGAGGCGGCAATGCCTGTAAGAACGGCAGCAGAGTGTTGTGAAGCCCCCCTCT CTGTTCTTGGTATTGATGCACACTGTCATGTTGACAGCGAAGAGATTGGTCGGCTTGAACTTTCGGTGAGAACGGCAAAG CATCAGTATGAAAGGCTTACGGTTCCTCTGACCGGAGCATTTCATGCCTCAAACATCTCTCTTGCGGTGATGGTTGCAGA AACGGCCGGCATTGATGAGTCATCTATCCGCAATGGGCTTGCAAACCTTTTGCAAACGGGTTACCGGGCCAGGCTTGAAA AGATAGCAGCGAATCCTGACGTCTTGCTGGATGTGTCGCACAATGCGAACGGCATTGAAGAGACCGTCAACACGCTTGCC CGTTTCAGAAATCGTTATCGGAATCTGTTTGTGCTCATCGGGCTTGCCTCCGATAAAAATGCCACAGCAATCGTCAAACA TCTCAAGCGGCTATCATGCCGACTGGTTGCGGTTTCCATCCCTTCCGAAAGAAGTATTCCGGCTTTGGAGCTTGGCGGGA TTGGAGAGGCTGAAGATATTCCGACTATGGTGTTCAGTTCGCCTCTTGATGGGCTTGGCTATCTTTCAGGCATCGCCGAA GCTGAGGATCTGGTACTGGTTACCGGATCGTTCTATCTGGCAGGCGAGGTGCTTTCAAACGGTGGCTGGAACAAGGAGAT GAGCTGA
Upstream 100 bases:
>100_bases AGCCGTTTCGGCTCTTCTTGAAGAGAAGCCGGAACAATCCGTTGAAGAGGTCATTAAGTATGCACTCGCGACCATTCATA ACAGTTAACCCCGATTTTCG
Downstream 100 bases:
>100_bases TGAGCGCGTTGTTAAGTTTTTTTCCCGAAAAAAATTATATATTTATTATAACTACAGAGGTTCTCCATGATTTATGGGTA ATACTTCCAGGCCGTTTTTT
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MNYQEALDFLYPLHRFGIKPGLERVFGLLAVLGSPHRRLGTIVHVSGTNGKGTTAAAIAAIFQAAGKKTALYTSPHLVDF TERMRINGGCIPHELVATYCSLIKSRVEESHTTFFEATTAIAFAWFASEHVEVTIVETGMGGRLDATNVVHADYVAITSI GQDHTAWLGSTPALIAAEKAAIIKKGSQVFSAVTDSEAAMPVRTAAECCEAPLSVLGIDAHCHVDSEEIGRLELSVRTAK HQYERLTVPLTGAFHASNISLAVMVAETAGIDESSIRNGLANLLQTGYRARLEKIAANPDVLLDVSHNANGIEETVNTLA RFRNRYRNLFVLIGLASDKNATAIVKHLKRLSCRLVAVSIPSERSIPALELGGIGEAEDIPTMVFSSPLDGLGYLSGIAE AEDLVLVTGSFYLAGEVLSNGGWNKEMS
Sequences:
>Translated_428_residues MNYQEALDFLYPLHRFGIKPGLERVFGLLAVLGSPHRRLGTIVHVSGTNGKGTTAAAIAAIFQAAGKKTALYTSPHLVDF TERMRINGGCIPHELVATYCSLIKSRVEESHTTFFEATTAIAFAWFASEHVEVTIVETGMGGRLDATNVVHADYVAITSI GQDHTAWLGSTPALIAAEKAAIIKKGSQVFSAVTDSEAAMPVRTAAECCEAPLSVLGIDAHCHVDSEEIGRLELSVRTAK HQYERLTVPLTGAFHASNISLAVMVAETAGIDESSIRNGLANLLQTGYRARLEKIAANPDVLLDVSHNANGIEETVNTLA RFRNRYRNLFVLIGLASDKNATAIVKHLKRLSCRLVAVSIPSERSIPALELGGIGEAEDIPTMVFSSPLDGLGYLSGIAE AEDLVLVTGSFYLAGEVLSNGGWNKEMS >Mature_428_residues MNYQEALDFLYPLHRFGIKPGLERVFGLLAVLGSPHRRLGTIVHVSGTNGKGTTAAAIAAIFQAAGKKTALYTSPHLVDF TERMRINGGCIPHELVATYCSLIKSRVEESHTTFFEATTAIAFAWFASEHVEVTIVETGMGGRLDATNVVHADYVAITSI GQDHTAWLGSTPALIAAEKAAIIKKGSQVFSAVTDSEAAMPVRTAAECCEAPLSVLGIDAHCHVDSEEIGRLELSVRTAK HQYERLTVPLTGAFHASNISLAVMVAETAGIDESSIRNGLANLLQTGYRARLEKIAANPDVLLDVSHNANGIEETVNTLA RFRNRYRNLFVLIGLASDKNATAIVKHLKRLSCRLVAVSIPSERSIPALELGGIGEAEDIPTMVFSSPLDGLGYLSGIAE AEDLVLVTGSFYLAGEVLSNGGWNKEMS
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=181, Percent_Identity=37.5690607734807, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI66932984, Length=180, Percent_Identity=37.7777777777778, Blast_Score=119, Evalue=5e-27, Organism=Escherichia coli, GI1788654, Length=417, Percent_Identity=31.89448441247, Blast_Score=161, Evalue=9e-41, Organism=Caenorhabditis elegans, GI71984923, Length=443, Percent_Identity=26.1851015801354, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17553148, Length=443, Percent_Identity=26.1851015801354, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17553150, Length=443, Percent_Identity=26.1851015801354, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6323760, Length=435, Percent_Identity=28.0459770114943, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6324815, Length=258, Percent_Identity=31.3953488372093, Blast_Score=103, Evalue=4e-23, Organism=Drosophila melanogaster, GI24641571, Length=170, Percent_Identity=36.4705882352941, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24581568, Length=196, Percent_Identity=31.1224489795918, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 45840; Mature: 45840
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQEALDFLYPLHRFGIKPGLERVFGLLAVLGSPHRRLGTIVHVSGTNGKGTTAAAIAA CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCEEEEEECCCCCCHHHHHHHH IFQAAGKKTALYTSPHLVDFTERMRINGGCIPHELVATYCSLIKSRVEESHTTFFEATTA HHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFAWFASEHVEVTIVETGMGGRLDATNVVHADYVAITSIGQDHTAWLGSTPALIAAEKA HHHHEECCCCEEEEEEEECCCCCCCCCCEEEECEEEEEECCCCCCHHCCCCCHHHHHHHH AIIKKGSQVFSAVTDSEAAMPVRTAAECCEAPLSVLGIDAHCHVDSEEIGRLELSVRTAK HHHHCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHEEECEEECCCHHHHCEEEEEEEHHH HQYERLTVPLTGAFHASNISLAVMVAETAGIDESSIRNGLANLLQTGYRARLEKIAANPD HHHHEEEEEEECCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLLDVSHNANGIEETVNTLARFRNRYRNLFVLIGLASDKNATAIVKHLKRLSCRLVAVSI EEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEC PSERSIPALELGGIGEAEDIPTMVFSSPLDGLGYLSGIAEAEDLVLVTGSFYLAGEVLSN CCCCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCEEEEECCCEEEHHHHHC GGWNKEMS CCCCCCCC >Mature Secondary Structure MNYQEALDFLYPLHRFGIKPGLERVFGLLAVLGSPHRRLGTIVHVSGTNGKGTTAAAIAA CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCEEEEEECCCCCCHHHHHHHH IFQAAGKKTALYTSPHLVDFTERMRINGGCIPHELVATYCSLIKSRVEESHTTFFEATTA HHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFAWFASEHVEVTIVETGMGGRLDATNVVHADYVAITSIGQDHTAWLGSTPALIAAEKA HHHHEECCCCEEEEEEEECCCCCCCCCCEEEECEEEEEECCCCCCHHCCCCCHHHHHHHH AIIKKGSQVFSAVTDSEAAMPVRTAAECCEAPLSVLGIDAHCHVDSEEIGRLELSVRTAK HHHHCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHEEECEEECCCHHHHCEEEEEEEHHH HQYERLTVPLTGAFHASNISLAVMVAETAGIDESSIRNGLANLLQTGYRARLEKIAANPD HHHHEEEEEEECCEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLLDVSHNANGIEETVNTLARFRNRYRNLFVLIGLASDKNATAIVKHLKRLSCRLVAVSI EEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEC PSERSIPALELGGIGEAEDIPTMVFSSPLDGLGYLSGIAEAEDLVLVTGSFYLAGEVLSN CCCCCCCEEEECCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCEEEEECCCEEEHHHHHC GGWNKEMS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]