| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356187
Identifier: 119356187
GI number: 119356187
Start: 384737
End: 386182
Strand: Reverse
Name: 119356187
Synonym: Cpha266_0348
Alternate gene names: NA
Gene position: 386182-384737 (Counterclockwise)
Preceding gene: 119356188
Following gene: 119356185
Centisome position: 12.32
GC content: 34.09
Gene sequence:
>1446_bases GTGCAAATAAATTCATCTGATCGCACACAGAGTATTTCATCTATATGGCATCATCGTCTCATTCGTTTTTTCTCATCAAC TACTACGCAATACATTGCAGCAGGTCTGTCGTTGATTCTTATTTTCAACACATATTACCTGCTTATAGACATGAAAGTAT TTGGGCACGACGAAGTGCATTATTACACTGATTTTACATTTAAATTAAAAGAAGAGGGCCGCTGGGCCAACTATTTTCTT CATAAATTATTGAGACATATACCGCTTCAAACTCACGTCATTTTATTTCTATCTTCATTGTGGGGTGTATTTTATTATAT ATCTAAAAACCTTACAAAAGAATCCTGGTATTCAATTATTATAGCATCTGTTTTACTGATTGAAACCCCAAATGCATATC AATCCCTCTGGCCAGCAACAGTCTTGCCCACAACAATTTCATTATTGCTTTTGGCCTGGATGGCGCAAAAAGATATATCC TATAAAGTTATTTATTTAGTTGGAGGCGTTTTATTATTTGGCATGATGCAAAATTATTATTTTCTGCTTCCACTCCTGTT TTTAGGGCACTATAAATTTGATAAAACAAGTATTAACAGCACCATACCATTAGTCACAACCCATTTATTATTCTGGATTA CTGGCGCAGTCTCAGGTCTGGTTGTCGCGTCCTTAATTGTTTATATTCATACCGGACAGGCAGGGATCATTCCTGCTGAG TGGAGATTAATCATGCCTGCCCATGACATATCCACTCTTTTAAGAAATATAATTTATGTTTTTCAAAACTTGACAGAACA ACTTGTTGTTTTCTGGAAAAACTCGGCAAGTAATGGGTTCCTCTATCCCTTACTTCTGATTATATTCACTTTCGCACGCT TGAAAAATTCATTTTCAAACTTATATATCTCTATTATTCTATCAGCTGTTTTTCTCTCTTTCTTTATTTTTTCAATCCCT TTGGCTCCAATCATTCAAACAAGAAGCCTTGTTGCTTTTTCATCGTCCTTAATACTTCTTTTTTTTATTGAATCCAAGCA ATTACTTTTCCCTCGTTGGCTAAGTGTTTTTTTATTACTCTGGACAGGATTAAATCTTTCTATTTCTGGTCGATCTTATT TATATGAACATAAAACTCAATCGGAATTTGTTTTAAATAAAATTGAAGCTGCGTTTTCACATCATCCGGCTAATTATACT GCGGTTGCTGTTTTTGGCCATGTAGACAACAAATATAAGGAGGCTTTTCTTTTTAATAATCCTGAGCGTTTAAGACCCAT CATTCTTACTTTGGGTGCCAATCATTTTATCGATGGAAGAGTAGATACTCAGCAGAAGAGTCTTCTCACTGAAGCTGTAA ATATTGATACAACTTCAGCTAACAACAAAATTAAATTATTCGTAACAAAAAAGAATGTTGCTGTTATTCTATTGGAAAAA AATTAA
Upstream 100 bases:
>100_bases AAACATCATAAAAACATTCACAATCTCTTATAGTTGACCTTATATTAATAAACCATATAAAGTCATTTCCCACATTTTAA TAATATTAATAATTTTATCT
Downstream 100 bases:
>100_bases TTACTATTGCAGCTGTTATTTTTATAGCTTTCATTGATGTTTTTCTATAACGTACTTTAATCTTTTTTTACTTTTTCATA ATAGCATCAGCAATAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MQINSSDRTQSISSIWHHRLIRFFSSTTTQYIAAGLSLILIFNTYYLLIDMKVFGHDEVHYYTDFTFKLKEEGRWANYFL HKLLRHIPLQTHVILFLSSLWGVFYYISKNLTKESWYSIIIASVLLIETPNAYQSLWPATVLPTTISLLLLAWMAQKDIS YKVIYLVGGVLLFGMMQNYYFLLPLLFLGHYKFDKTSINSTIPLVTTHLLFWITGAVSGLVVASLIVYIHTGQAGIIPAE WRLIMPAHDISTLLRNIIYVFQNLTEQLVVFWKNSASNGFLYPLLLIIFTFARLKNSFSNLYISIILSAVFLSFFIFSIP LAPIIQTRSLVAFSSSLILLFFIESKQLLFPRWLSVFLLLWTGLNLSISGRSYLYEHKTQSEFVLNKIEAAFSHHPANYT AVAVFGHVDNKYKEAFLFNNPERLRPIILTLGANHFIDGRVDTQQKSLLTEAVNIDTTSANNKIKLFVTKKNVAVILLEK N
Sequences:
>Translated_481_residues MQINSSDRTQSISSIWHHRLIRFFSSTTTQYIAAGLSLILIFNTYYLLIDMKVFGHDEVHYYTDFTFKLKEEGRWANYFL HKLLRHIPLQTHVILFLSSLWGVFYYISKNLTKESWYSIIIASVLLIETPNAYQSLWPATVLPTTISLLLLAWMAQKDIS YKVIYLVGGVLLFGMMQNYYFLLPLLFLGHYKFDKTSINSTIPLVTTHLLFWITGAVSGLVVASLIVYIHTGQAGIIPAE WRLIMPAHDISTLLRNIIYVFQNLTEQLVVFWKNSASNGFLYPLLLIIFTFARLKNSFSNLYISIILSAVFLSFFIFSIP LAPIIQTRSLVAFSSSLILLFFIESKQLLFPRWLSVFLLLWTGLNLSISGRSYLYEHKTQSEFVLNKIEAAFSHHPANYT AVAVFGHVDNKYKEAFLFNNPERLRPIILTLGANHFIDGRVDTQQKSLLTEAVNIDTTSANNKIKLFVTKKNVAVILLEK N >Mature_481_residues MQINSSDRTQSISSIWHHRLIRFFSSTTTQYIAAGLSLILIFNTYYLLIDMKVFGHDEVHYYTDFTFKLKEEGRWANYFL HKLLRHIPLQTHVILFLSSLWGVFYYISKNLTKESWYSIIIASVLLIETPNAYQSLWPATVLPTTISLLLLAWMAQKDIS YKVIYLVGGVLLFGMMQNYYFLLPLLFLGHYKFDKTSINSTIPLVTTHLLFWITGAVSGLVVASLIVYIHTGQAGIIPAE WRLIMPAHDISTLLRNIIYVFQNLTEQLVVFWKNSASNGFLYPLLLIIFTFARLKNSFSNLYISIILSAVFLSFFIFSIP LAPIIQTRSLVAFSSSLILLFFIESKQLLFPRWLSVFLLLWTGLNLSISGRSYLYEHKTQSEFVLNKIEAAFSHHPANYT AVAVFGHVDNKYKEAFLFNNPERLRPIILTLGANHFIDGRVDTQQKSLLTEAVNIDTTSANNKIKLFVTKKNVAVILLEK N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55232; Mature: 55232
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINSSDRTQSISSIWHHRLIRFFSSTTTQYIAAGLSLILIFNTYYLLIDMKVFGHDEVH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEE YYTDFTFKLKEEGRWANYFLHKLLRHIPLQTHVILFLSSLWGVFYYISKNLTKESWYSII EEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IASVLLIETPNAYQSLWPATVLPTTISLLLLAWMAQKDISYKVIYLVGGVLLFGMMQNYY HHHHHHEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH FLLPLLFLGHYKFDKTSINSTIPLVTTHLLFWITGAVSGLVVASLIVYIHTGQAGIIPAE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC WRLIMPAHDISTLLRNIIYVFQNLTEQLVVFWKNSASNGFLYPLLLIIFTFARLKNSFSN CEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LYISIILSAVFLSFFIFSIPLAPIIQTRSLVAFSSSLILLFFIESKQLLFPRWLSVFLLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH WTGLNLSISGRSYLYEHKTQSEFVLNKIEAAFSHHPANYTAVAVFGHVDNKYKEAFLFNN HCCCCEEECCCHHEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCC PERLRPIILTLGANHFIDGRVDTQQKSLLTEAVNIDTTSANNKIKLFVTKKNVAVILLEK HHHHCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEC N C >Mature Secondary Structure MQINSSDRTQSISSIWHHRLIRFFSSTTTQYIAAGLSLILIFNTYYLLIDMKVFGHDEVH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCEE YYTDFTFKLKEEGRWANYFLHKLLRHIPLQTHVILFLSSLWGVFYYISKNLTKESWYSII EEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IASVLLIETPNAYQSLWPATVLPTTISLLLLAWMAQKDISYKVIYLVGGVLLFGMMQNYY HHHHHHEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH FLLPLLFLGHYKFDKTSINSTIPLVTTHLLFWITGAVSGLVVASLIVYIHTGQAGIIPAE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC WRLIMPAHDISTLLRNIIYVFQNLTEQLVVFWKNSASNGFLYPLLLIIFTFARLKNSFSN CEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LYISIILSAVFLSFFIFSIPLAPIIQTRSLVAFSSSLILLFFIESKQLLFPRWLSVFLLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH WTGLNLSISGRSYLYEHKTQSEFVLNKIEAAFSHHPANYTAVAVFGHVDNKYKEAFLFNN HCCCCEEECCCHHEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHCCCC PERLRPIILTLGANHFIDGRVDTQQKSLLTEAVNIDTTSANNKIKLFVTKKNVAVILLEK HHHHCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEEEC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA