| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356165
Identifier: 119356165
GI number: 119356165
Start: 354158
End: 354511
Strand: Direct
Name: 119356165
Synonym: Cpha266_0323
Alternate gene names: NA
Gene position: 354158-354511 (Clockwise)
Preceding gene: 119356164
Following gene: 119356166
Centisome position: 11.3
GC content: 46.61
Gene sequence:
>354_bases ATGAACGGAAATGAAAAAAAGAGAGGTCGTTGCAGTGCCCGCTGCGTTGTTAACAAATGCAGTTGCGGCGCATTTCATCT GCATTACCGCTATGCTGTTGTCATTATCGGCAAGCAGACGCTGTTTCAGATTATGGAAGATTGCTATCGATGGGAGGAGC TGAACGTCGGGATGAGTGAGGGTTGGTGTACGAAACCTTTTGTCGTTATGCTCGGCATTGTAACGATAACCGTTCCTCAG GTTGATTTTGAAGAGTTCAGTAAGGCGATTCAAGATGCTGTTTCTCTGGAGCTTGATCTTCCTGGTATAGCAGGTGGCCT TTTGAGTTTTCCTGGGAGTTCGGCCAGCAAATAA
Upstream 100 bases:
>100_bases CAATGTTGGTTTTTATGAGGGTTTGAGGCTGAGGCCCTTTTTTTGTGACAGTATCGTTATTTATACTAAATCTAAATAAA AAAGGAAGAAGGAGCTGAAG
Downstream 100 bases:
>100_bases GGAGGATTAAAAAAATATTCCGGCATCAAAATAAAAGGAGAAGTATGAAACGAATAGGCCTTTTCTGGGGATCACAAACA GGTAATACGGAGTTGGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNGNEKKRGRCSARCVVNKCSCGAFHLHYRYAVVIIGKQTLFQIMEDCYRWEELNVGMSEGWCTKPFVVMLGIVTITVPQ VDFEEFSKAIQDAVSLELDLPGIAGGLLSFPGSSASK
Sequences:
>Translated_117_residues MNGNEKKRGRCSARCVVNKCSCGAFHLHYRYAVVIIGKQTLFQIMEDCYRWEELNVGMSEGWCTKPFVVMLGIVTITVPQ VDFEEFSKAIQDAVSLELDLPGIAGGLLSFPGSSASK >Mature_117_residues MNGNEKKRGRCSARCVVNKCSCGAFHLHYRYAVVIIGKQTLFQIMEDCYRWEELNVGMSEGWCTKPFVVMLGIVTITVPQ VDFEEFSKAIQDAVSLELDLPGIAGGLLSFPGSSASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12924; Mature: 12924
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNEKKRGRCSARCVVNKCSCGAFHLHYRYAVVIIGKQTLFQIMEDCYRWEELNVGMSE CCCCCCCCCCCHHHEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCC GWCTKPFVVMLGIVTITVPQVDFEEFSKAIQDAVSLELDLPGIAGGLLSFPGSSASK CCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MNGNEKKRGRCSARCVVNKCSCGAFHLHYRYAVVIIGKQTLFQIMEDCYRWEELNVGMSE CCCCCCCCCCCHHHEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCC GWCTKPFVVMLGIVTITVPQVDFEEFSKAIQDAVSLELDLPGIAGGLLSFPGSSASK CCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA