| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is isiB [H]
Identifier: 119356166
GI number: 119356166
Start: 354556
End: 355062
Strand: Direct
Name: isiB [H]
Synonym: Cpha266_0324
Alternate gene names: 119356166
Gene position: 354556-355062 (Clockwise)
Preceding gene: 119356165
Following gene: 119356167
Centisome position: 11.31
GC content: 47.14
Gene sequence:
>507_bases ATGAAACGAATAGGCCTTTTCTGGGGATCACAAACAGGTAATACGGAGTTGGCAGCAACGCTTATTGTTGAAGCGATCGG TAGTGATATTGTTCAGAGTTACGATATACGTGGCGTTGATAGCGGCACTTTCGGGAGTTATGATTCCCTGATTCTCGGGA CATCGACATGGGGCGCTGGTGAGCTGCAGGACGACTGGGACTCTTTTCTTCCGCAATTTGACGCCATTGATTTTATCGGA AAAAAAGTGGCGCTTTTCGGATTGGGTGATCAGCTCGGTTATGGCGATTATTTTCTTGACGGTATGGGAATTCTCTATGA AAACCTGATCGGTCGTGGTGCGAAAGTAACGGGTTCATGGTCAGTTGATGGGTATGAGCACTCTTATTCCAGAGCGATAC AATACGGAGCTTTCGTCGGGTTGGCGCTCGATGCAGATAATCAGAATCACCTTACTCCCGTGCGTATCAAACAGTGGGTG GATCAGATTTTACCGATTTTGCTGTGA
Upstream 100 bases:
>100_bases TTCCTGGTATAGCAGGTGGCCTTTTGAGTTTTCCTGGGAGTTCGGCCAGCAAATAAGGAGGATTAAAAAAATATTCCGGC ATCAAAATAAAAGGAGAAGT
Downstream 100 bases:
>100_bases TCGGGGTGAATTTTTATAACTAAAACAGGCGAATAATCATGTCCTGACTTCATACACTTGTTGATCGAACTCGCCCGGAA AGCCAATAAAATCAAGGGGT
Product: flavodoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKRIGLFWGSQTGNTELAATLIVEAIGSDIVQSYDIRGVDSGTFGSYDSLILGTSTWGAGELQDDWDSFLPQFDAIDFIG KKVALFGLGDQLGYGDYFLDGMGILYENLIGRGAKVTGSWSVDGYEHSYSRAIQYGAFVGLALDADNQNHLTPVRIKQWV DQILPILL
Sequences:
>Translated_168_residues MKRIGLFWGSQTGNTELAATLIVEAIGSDIVQSYDIRGVDSGTFGSYDSLILGTSTWGAGELQDDWDSFLPQFDAIDFIG KKVALFGLGDQLGYGDYFLDGMGILYENLIGRGAKVTGSWSVDGYEHSYSRAIQYGAFVGLALDADNQNHLTPVRIKQWV DQILPILL >Mature_168_residues MKRIGLFWGSQTGNTELAATLIVEAIGSDIVQSYDIRGVDSGTFGSYDSLILGTSTWGAGELQDDWDSFLPQFDAIDFIG KKVALFGLGDQLGYGDYFLDGMGILYENLIGRGAKVTGSWSVDGYEHSYSRAIQYGAFVGLALDADNQNHLTPVRIKQWV DQILPILL
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1789262, Length=164, Percent_Identity=43.9024390243902, Blast_Score=140, Evalue=5e-35, Organism=Escherichia coli, GI1786900, Length=164, Percent_Identity=43.9024390243902, Blast_Score=139, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 18353; Mature: 18353
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIGLFWGSQTGNTELAATLIVEAIGSDIVQSYDIRGVDSGTFGSYDSLILGTSTWGAG CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC ELQDDWDSFLPQFDAIDFIGKKVALFGLGDQLGYGDYFLDGMGILYENLIGRGAKVTGSW CCCHHHHHHCCCHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC SVDGYEHSYSRAIQYGAFVGLALDADNQNHLTPVRIKQWVDQILPILL CCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRIGLFWGSQTGNTELAATLIVEAIGSDIVQSYDIRGVDSGTFGSYDSLILGTSTWGAG CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC ELQDDWDSFLPQFDAIDFIGKKVALFGLGDQLGYGDYFLDGMGILYENLIGRGAKVTGSW CCCHHHHHHCCCHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC SVDGYEHSYSRAIQYGAFVGLALDADNQNHLTPVRIKQWVDQILPILL CCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8045418; 8905231; 1633177 [H]