| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356158
Identifier: 119356158
GI number: 119356158
Start: 348685
End: 349698
Strand: Direct
Name: 119356158
Synonym: Cpha266_0316
Alternate gene names: NA
Gene position: 348685-349698 (Clockwise)
Preceding gene: 119356156
Following gene: 119356159
Centisome position: 11.13
GC content: 50.39
Gene sequence:
>1014_bases ATGAACGTATTGTTGAAATCCACAGCTTTAGTCGGCATTTCTCTTGTTTGCTCTTCAGGGCTTTTTGCTGCCGAAGAGAG CCGTCAGAGCGCTGCTCTTGAACCGGCTCTCTTCAAAGGGCTCTCTTTCTCAGGTTTGCTGGAGGTAGAGGGCGCATATG GAGAGAGTGACGGGGAGAGCTCAAGCGATCTTTCTCTTGCGACAGTAGAGCTGGGGCTTGAAGCAAAGGTGACGGACTGG TTGAGTGCCCGCATCCTTCTTCTCTACGAACAGAATGGCGATGACCGTATTCTTGTTGATGAGGCCAGCATAAGAGTGCA GCGGGATAATTCGCCCTTTTTTGTGCAGGCGGGACGTTTTACGCAATCATTTGGCAATTTTGCCACGGGGATGATTTCGG ATCCGATAACGCTCGAACTGGGCGAGACGAAACATCACGCTTCCCTGCAGGCAGGGTATGAAGGTGAGATTGTGTCGGCT TCCTTTAGTTTTTTTAAGGGCGATGTGCAGAAAGAGGGTATGGACGAGGTGAACAGTTTTGTCGGGGCGCTTTCCATTGG CGGCGAGGTGAACGAGCGGTTCAGATATGAACTCGGAGGTTCGTATTGCAGCAATATGGCCGATACCGATGGTCTTCAGG ATGATTTTGAGCCAGATCTCTACAGGACGGCTGATTATGTGGGAGGCTACAGCGTGTATGGCCTTTTAGGGTTCGGGAGC GTTGAGGTACGTGCTGAATATCTCGCTGCTGCGGAGAGTTTTGTCGATGGAGAGCGTTCGGGATTAAAGCCTGCGGCATA TAATGTCGAGGTGGGTTGTGATCTTCCCGAATCCCTGCATCTTGCTTTGCGATATGCCGGCGCAGAAGATTTTAATGTTG AAAAGCAGTATGGTGCGACACTTGCCTGTGATCTGTCTGAAAAAGCGACACTGGCTCTTGAATACCTTCATAACAGCAAT GATGACGAGACAAGCAGTGACGCTGTGACGGTTCAGCTTGCTATGAGCTTTTAA
Upstream 100 bases:
>100_bases ATTTGTAATTAGTCAAAATAAAATTAGATTCAAAAGGTTTATTTGTATTCAATCTAAATAACAGAGGGCGTTTTTTTCTC ATAATCCCAATTATTTATTC
Downstream 100 bases:
>100_bases ATAAGGATAACATAATCAAAGGGAGTGGGATGATGGTTCCGTTAGGTTTTTTGCTTCAGGGGGAGTCTGCCGAAATAGTG GGCTTCAGGTCAGGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNVLLKSTALVGISLVCSSGLFAAEESRQSAALEPALFKGLSFSGLLEVEGAYGESDGESSSDLSLATVELGLEAKVTDW LSARILLLYEQNGDDRILVDEASIRVQRDNSPFFVQAGRFTQSFGNFATGMISDPITLELGETKHHASLQAGYEGEIVSA SFSFFKGDVQKEGMDEVNSFVGALSIGGEVNERFRYELGGSYCSNMADTDGLQDDFEPDLYRTADYVGGYSVYGLLGFGS VEVRAEYLAAAESFVDGERSGLKPAAYNVEVGCDLPESLHLALRYAGAEDFNVEKQYGATLACDLSEKATLALEYLHNSN DDETSSDAVTVQLAMSF
Sequences:
>Translated_337_residues MNVLLKSTALVGISLVCSSGLFAAEESRQSAALEPALFKGLSFSGLLEVEGAYGESDGESSSDLSLATVELGLEAKVTDW LSARILLLYEQNGDDRILVDEASIRVQRDNSPFFVQAGRFTQSFGNFATGMISDPITLELGETKHHASLQAGYEGEIVSA SFSFFKGDVQKEGMDEVNSFVGALSIGGEVNERFRYELGGSYCSNMADTDGLQDDFEPDLYRTADYVGGYSVYGLLGFGS VEVRAEYLAAAESFVDGERSGLKPAAYNVEVGCDLPESLHLALRYAGAEDFNVEKQYGATLACDLSEKATLALEYLHNSN DDETSSDAVTVQLAMSF >Mature_337_residues MNVLLKSTALVGISLVCSSGLFAAEESRQSAALEPALFKGLSFSGLLEVEGAYGESDGESSSDLSLATVELGLEAKVTDW LSARILLLYEQNGDDRILVDEASIRVQRDNSPFFVQAGRFTQSFGNFATGMISDPITLELGETKHHASLQAGYEGEIVSA SFSFFKGDVQKEGMDEVNSFVGALSIGGEVNERFRYELGGSYCSNMADTDGLQDDFEPDLYRTADYVGGYSVYGLLGFGS VEVRAEYLAAAESFVDGERSGLKPAAYNVEVGCDLPESLHLALRYAGAEDFNVEKQYGATLACDLSEKATLALEYLHNSN DDETSSDAVTVQLAMSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0422 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36240; Mature: 36240
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLLKSTALVGISLVCSSGLFAAEESRQSAALEPALFKGLSFSGLLEVEGAYGESDGES CCEEECHHHHHHHHHHHCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCCCCCC SSDLSLATVELGLEAKVTDWLSARILLLYEQNGDDRILVDEASIRVQRDNSPFFVQAGRF CCCCEEEEEEECCCEEHHHHCCEEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCCH TQSFGNFATGMISDPITLELGETKHHASLQAGYEGEIVSASFSFFKGDVQKEGMDEVNSF HHHHCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHH VGALSIGGEVNERFRYELGGSYCSNMADTDGLQDDFEPDLYRTADYVGGYSVYGLLGFGS HHHHCCCCCCCHHEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCC VEVRAEYLAAAESFVDGERSGLKPAAYNVEVGCDLPESLHLALRYAGAEDFNVEKQYGAT HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCCCHHHHCCE LACDLSEKATLALEYLHNSNDDETSSDAVTVQLAMSF EEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MNVLLKSTALVGISLVCSSGLFAAEESRQSAALEPALFKGLSFSGLLEVEGAYGESDGES CCEEECHHHHHHHHHHHCCCCEECHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCCCCCC SSDLSLATVELGLEAKVTDWLSARILLLYEQNGDDRILVDEASIRVQRDNSPFFVQAGRF CCCCEEEEEEECCCEEHHHHCCEEEEEEEECCCCCEEEEECCEEEEEECCCCEEEECCCH TQSFGNFATGMISDPITLELGETKHHASLQAGYEGEIVSASFSFFKGDVQKEGMDEVNSF HHHHCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHHH VGALSIGGEVNERFRYELGGSYCSNMADTDGLQDDFEPDLYRTADYVGGYSVYGLLGFGS HHHHCCCCCCCHHEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCC VEVRAEYLAAAESFVDGERSGLKPAAYNVEVGCDLPESLHLALRYAGAEDFNVEKQYGAT HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCCCHHHHCCE LACDLSEKATLALEYLHNSNDDETSSDAVTVQLAMSF EEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]