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The map label for this gene is yjhR [C]

Identifier: 119356141

GI number: 119356141

Start: 329006

End: 331756

Strand: Direct

Name: yjhR [C]

Synonym: Cpha266_0299

Alternate gene names: 119356141

Gene position: 329006-331756 (Clockwise)

Preceding gene: 119356138

Following gene: 119356145

Centisome position: 10.5

GC content: 50.45

Gene sequence:

>2751_bases
ATGAACTCAAGGCAAAACCTCGTCATCATCAAAGGCAAGGATCGTACGGATCAGATTTTGCGAATCGGGGAAGCAACGGA
ACAACGTATGATCGTGACTTTCAGTAATGGAAAGCCGTATTTCTATGCCAGAGAAAACGTTGCATGGCTTTCGAATCCCG
GTCGGATAACAATCGATCATTGTCAGGTACTGGTTGAAGGTGATTTGCTGTTCGATATCGAGGAGGTACTGCGTTTCGAA
ACCTGGGTGAAAATTTTTCGCAGGAATGGAGAAAGCCGGTGCTGCCTGTTTTCGGATTTTTCCGTGCAGCGAATGTCCTC
ATCAGATGGGCGCAGTACCGATGTGCTTGCCTATTTCCGGGAACTCGCCGAAACCACCGGACTCATGACGAATGATAACA
AGTCGATGATGGCGATGAAATATCGGAACCTGGGTGTCGTTTCGGGTCGAAGTATCCTTTCGAGTTTTCTGCAGGCTCGT
CCTCCCGGTTCGGGTACGGTACCGTCAGATCTTATCTTTCCGTTTGGTTGCAATATGAGCCAGAAAATGGCGGTACAAAG
GGCGATCGAGCATCCCGTCTCCCTGATTCAGGGACCTCCGGGAACCGGCAAAACCCAAACCATCCTGAACCTGATAGGCA
ACATGCTGCTCCGGAGGAAACGGGTCGCTGTGGTCTCCAGCAACAACTCGGCTACAGCCAATGTGCTGGAAAAGCTTCAG
AAATATGAACTGGATTTCGTGGCAGCATCTCTCGGAAGCGCCGAGAACAAACAGGTGTTTATCGAGGGGCAGTCATCCGA
TGTCGTTCAGATGCCGACGTTCCAGGCTGATCAGGAAGCTTCTGTTCTTCAGGAGATTTCCCTTCTGAATACTTCGCTTG
ATAACGCATTTGCAGAGAAGAACGGGTTGGCTGTCATAATTCAGCAGATCGATGCTCTTAAGCTTGAAATGGCTCACTTT
GAAAAGTACTGTGATGAAACAAATGGCGGCGACTTGCGTGTGATCGATCGGGCGATGAATGCTGAATTATCCGCACGGAA
GCTGTTGCATGCCTGGCTGGCTTCTGAAAAGGAATTAAAGCGTTATGCAAAAGCGGGTGTTGCTTCGCCTTCTAACCGAC
GTGTCGGTTTTCTGAAGAAGATCGGGTTTCTGCTCCGGTTTGGAACGGCAGGGAGCGCCTTTTTCGAGGTGAGCGTAAGG
GAACGGATTCCCCTGTTGCAGAAGGCCTATTACCTGCGCAAGCTTGCCGATATGGAACAAAGGCGGAAAACGCTTGAGGG
ATCCCTTGCGGGATTCCATTTTGATGAACGGCTGGAAAGGCTGACTGAACTTTCGATGCAACTGCTGAAGCACCGTCTTG
CACAGCACTACAACAACAGGGAGCGGAGAATATTCGCTCTTGAAGATCTCCGGAATCAGCCGGAAAAATTTCTTGAGGAA
TATCCGGTCATACTCAGCACAACGTTTTCCATCATTACATCGCTCAAGTCCGGCTATCTGTTCGATTGCGTCATCGTTGA
CGAGGCGAGTCAGGTCGATCTGCTGAGCGGCGTTCTTGCGATGGGTTGCGCAGAGAAGCTCGTCATCGTGGGTGATTCTA
TGCAACTGCCCAATGTTTTGACGGCGCAGGATGAAAAGCAGGCAAAAGAGGTTGCGTTACAATACGATCTTCCGGATTAT
GCCAGGTTCGAGCGACATAACCTGCTTTCTGCCGTGCGAACTGCGTTCCCTGATATTCCGGAGACGCTGTTGCTGGAGCA
TTATCGGTGTCATCCGAAGATCATTCAGTTCTGCAACCAGAAGTTCTATGGTGGCGAACTGCTTGTAATGACTCGCGATC
AGGGCGAGGCGGACGTGCTCAAGGCCTATATGACCGTCGAGGGCCGCCATGCGCGCGGTACGATCAATCAGCGCCAGGTT
GATGAAATTACACAGAATGTTTTGCCGGAACTGGCCTCCATCCATCCCGCTGACATAGGCATTGTTTCGCCATTCAGAGC
GCAGGCGGACCGGATGCTGTTATCTGTTGGGTCGAATGAGATCGGGATCGATACGGTACACAAGTATCAGGGCAGAGAAA
AGCGGGCAATAATTATCACAACCGTATCGAACAAATCCAACGAATTCGTCGATAATCCGAATCTGCTGAACGTTGCTGTA
TCCCGTGCGAAGGAGAAGCTCCGGCTGGTCGTTTCCATGGAGATGGCGGATGGGAACAGCAATGTCGCGGATCTTGTCCG
CTACATCCGGTACAACAATTGCGAGGTTATACCCGGCAGGGTTCGTTCTGTCTTTGATCTTCTCTATCAAGACTACACGG
CAGCACGTCTGGCGGTATTGAAAAAGTGGAAACGGGTTTCGATATACGATTCCGAGAATCTTGTCTACAGCGAGATAGAT
GCGGTACTTCAGGAGAAAGCTTATCGGGGGTTGGGTATCGTTTTTCAATTTCCGCTGTCGATGCTTGTTCGGAATAGAGA
AAATCTGACCACCGAAGAATCCTCCTATGCGGCCCATCCATGGACTAAAACCGATTTTCTGGTTTATCGTCGAGTCGATA
AAAGTCCGGTGCTTGTTATTGAAGTCGATGGATATGCATTTCATCGTGAAGGAACCCGTCAGGCGGAACGTGATGCGCTG
AAGGATGCCGTGTTGGAGAAATGCGGTCTGCCCATACTGCGCCTTTCGACAATCGGGAGCGACGAGCGGAACAGGATCAG
GAAAAAGCTGGAGGATGTGGTTGCGTCATGA

Upstream 100 bases:

>100_bases
GTTTTATTGGGCTTGGCTATTCATGGAGGCCAATAGCCTGATTCATACATGTCGCTATGCAGGCAGATTGAGCTATGAAG
ACTGAAAAAGACTGTTGAGC

Downstream 100 bases:

>100_bases
TCGTCAAAGTGCGAAACAGGCCGGGCATGCCTCACGGTATGCCCGCTCCTCTTCATGCAGAATCGAAAACCGGCCTGTTA
TGAAAGGTCAGCCCTGGAAA

Product: DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 916; Mature: 916

Protein sequence:

>916_residues
MNSRQNLVIIKGKDRTDQILRIGEATEQRMIVTFSNGKPYFYARENVAWLSNPGRITIDHCQVLVEGDLLFDIEEVLRFE
TWVKIFRRNGESRCCLFSDFSVQRMSSSDGRSTDVLAYFRELAETTGLMTNDNKSMMAMKYRNLGVVSGRSILSSFLQAR
PPGSGTVPSDLIFPFGCNMSQKMAVQRAIEHPVSLIQGPPGTGKTQTILNLIGNMLLRRKRVAVVSSNNSATANVLEKLQ
KYELDFVAASLGSAENKQVFIEGQSSDVVQMPTFQADQEASVLQEISLLNTSLDNAFAEKNGLAVIIQQIDALKLEMAHF
EKYCDETNGGDLRVIDRAMNAELSARKLLHAWLASEKELKRYAKAGVASPSNRRVGFLKKIGFLLRFGTAGSAFFEVSVR
ERIPLLQKAYYLRKLADMEQRRKTLEGSLAGFHFDERLERLTELSMQLLKHRLAQHYNNRERRIFALEDLRNQPEKFLEE
YPVILSTTFSIITSLKSGYLFDCVIVDEASQVDLLSGVLAMGCAEKLVIVGDSMQLPNVLTAQDEKQAKEVALQYDLPDY
ARFERHNLLSAVRTAFPDIPETLLLEHYRCHPKIIQFCNQKFYGGELLVMTRDQGEADVLKAYMTVEGRHARGTINQRQV
DEITQNVLPELASIHPADIGIVSPFRAQADRMLLSVGSNEIGIDTVHKYQGREKRAIIITTVSNKSNEFVDNPNLLNVAV
SRAKEKLRLVVSMEMADGNSNVADLVRYIRYNNCEVIPGRVRSVFDLLYQDYTAARLAVLKKWKRVSIYDSENLVYSEID
AVLQEKAYRGLGIVFQFPLSMLVRNRENLTTEESSYAAHPWTKTDFLVYRRVDKSPVLVIEVDGYAFHREGTRQAERDAL
KDAVLEKCGLPILRLSTIGSDERNRIRKKLEDVVAS

Sequences:

>Translated_916_residues
MNSRQNLVIIKGKDRTDQILRIGEATEQRMIVTFSNGKPYFYARENVAWLSNPGRITIDHCQVLVEGDLLFDIEEVLRFE
TWVKIFRRNGESRCCLFSDFSVQRMSSSDGRSTDVLAYFRELAETTGLMTNDNKSMMAMKYRNLGVVSGRSILSSFLQAR
PPGSGTVPSDLIFPFGCNMSQKMAVQRAIEHPVSLIQGPPGTGKTQTILNLIGNMLLRRKRVAVVSSNNSATANVLEKLQ
KYELDFVAASLGSAENKQVFIEGQSSDVVQMPTFQADQEASVLQEISLLNTSLDNAFAEKNGLAVIIQQIDALKLEMAHF
EKYCDETNGGDLRVIDRAMNAELSARKLLHAWLASEKELKRYAKAGVASPSNRRVGFLKKIGFLLRFGTAGSAFFEVSVR
ERIPLLQKAYYLRKLADMEQRRKTLEGSLAGFHFDERLERLTELSMQLLKHRLAQHYNNRERRIFALEDLRNQPEKFLEE
YPVILSTTFSIITSLKSGYLFDCVIVDEASQVDLLSGVLAMGCAEKLVIVGDSMQLPNVLTAQDEKQAKEVALQYDLPDY
ARFERHNLLSAVRTAFPDIPETLLLEHYRCHPKIIQFCNQKFYGGELLVMTRDQGEADVLKAYMTVEGRHARGTINQRQV
DEITQNVLPELASIHPADIGIVSPFRAQADRMLLSVGSNEIGIDTVHKYQGREKRAIIITTVSNKSNEFVDNPNLLNVAV
SRAKEKLRLVVSMEMADGNSNVADLVRYIRYNNCEVIPGRVRSVFDLLYQDYTAARLAVLKKWKRVSIYDSENLVYSEID
AVLQEKAYRGLGIVFQFPLSMLVRNRENLTTEESSYAAHPWTKTDFLVYRRVDKSPVLVIEVDGYAFHREGTRQAERDAL
KDAVLEKCGLPILRLSTIGSDERNRIRKKLEDVVAS
>Mature_916_residues
MNSRQNLVIIKGKDRTDQILRIGEATEQRMIVTFSNGKPYFYARENVAWLSNPGRITIDHCQVLVEGDLLFDIEEVLRFE
TWVKIFRRNGESRCCLFSDFSVQRMSSSDGRSTDVLAYFRELAETTGLMTNDNKSMMAMKYRNLGVVSGRSILSSFLQAR
PPGSGTVPSDLIFPFGCNMSQKMAVQRAIEHPVSLIQGPPGTGKTQTILNLIGNMLLRRKRVAVVSSNNSATANVLEKLQ
KYELDFVAASLGSAENKQVFIEGQSSDVVQMPTFQADQEASVLQEISLLNTSLDNAFAEKNGLAVIIQQIDALKLEMAHF
EKYCDETNGGDLRVIDRAMNAELSARKLLHAWLASEKELKRYAKAGVASPSNRRVGFLKKIGFLLRFGTAGSAFFEVSVR
ERIPLLQKAYYLRKLADMEQRRKTLEGSLAGFHFDERLERLTELSMQLLKHRLAQHYNNRERRIFALEDLRNQPEKFLEE
YPVILSTTFSIITSLKSGYLFDCVIVDEASQVDLLSGVLAMGCAEKLVIVGDSMQLPNVLTAQDEKQAKEVALQYDLPDY
ARFERHNLLSAVRTAFPDIPETLLLEHYRCHPKIIQFCNQKFYGGELLVMTRDQGEADVLKAYMTVEGRHARGTINQRQV
DEITQNVLPELASIHPADIGIVSPFRAQADRMLLSVGSNEIGIDTVHKYQGREKRAIIITTVSNKSNEFVDNPNLLNVAV
SRAKEKLRLVVSMEMADGNSNVADLVRYIRYNNCEVIPGRVRSVFDLLYQDYTAARLAVLKKWKRVSIYDSENLVYSEID
AVLQEKAYRGLGIVFQFPLSMLVRNRENLTTEESSYAAHPWTKTDFLVYRRVDKSPVLVIEVDGYAFHREGTRQAERDAL
KDAVLEKCGLPILRLSTIGSDERNRIRKKLEDVVAS

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI113722133, Length=334, Percent_Identity=26.9461077844311, Blast_Score=69, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17531515, Length=244, Percent_Identity=26.2295081967213, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17531513, Length=244, Percent_Identity=26.2295081967213, Blast_Score=74, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24660647, Length=315, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330969, Length=315, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103587; Mature: 103587

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRQNLVIIKGKDRTDQILRIGEATEQRMIVTFSNGKPYFYARENVAWLSNPGRITIDH
CCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCEEEEEECCEEEECCCCEEEEEE
CQVLVEGDLLFDIEEVLRFETWVKIFRRNGESRCCLFSDFSVQRMSSSDGRSTDVLAYFR
EEEEECCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHH
ELAETTGLMTNDNKSMMAMKYRNLGVVSGRSILSSFLQARPPGSGTVPSDLIFPFGCNMS
HHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCH
QKMAVQRAIEHPVSLIQGPPGTGKTQTILNLIGNMLLRRKRVAVVSSNNSATANVLEKLQ
HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
KYELDFVAASLGSAENKQVFIEGQSSDVVQMPTFQADQEASVLQEISLLNTSLDNAFAEK
HHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NGLAVIIQQIDALKLEMAHFEKYCDETNGGDLRVIDRAMNAELSARKLLHAWLASEKELK
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCHHHHH
RYAKAGVASPSNRRVGFLKKIGFLLRFGTAGSAFFEVSVRERIPLLQKAYYLRKLADMEQ
HHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHH
RRKTLEGSLAGFHFDERLERLTELSMQLLKHRLAQHYNNRERRIFALEDLRNQPEKFLEE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHH
YPVILSTTFSIITSLKSGYLFDCVIVDEASQVDLLSGVLAMGCAEKLVIVGDSMQLPNVL
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
TAQDEKQAKEVALQYDLPDYARFERHNLLSAVRTAFPDIPETLLLEHYRCHPKIIQFCNQ
CCCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCC
KFYGGELLVMTRDQGEADVLKAYMTVEGRHARGTINQRQVDEITQNVLPELASIHPADIG
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IVSPFRAQADRMLLSVGSNEIGIDTVHKYQGREKRAIIITTVSNKSNEFVDNPNLLNVAV
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH
SRAKEKLRLVVSMEMADGNSNVADLVRYIRYNNCEVIPGRVRSVFDLLYQDYTAARLAVL
HHHHHHEEEEEEEEECCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
KKWKRVSIYDSENLVYSEIDAVLQEKAYRGLGIVFQFPLSMLVRNRENLTTEESSYAAHP
HHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WTKTDFLVYRRVDKSPVLVIEVDGYAFHREGTRQAERDALKDAVLEKCGLPILRLSTIGS
CCCCCEEEEEECCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC
DERNRIRKKLEDVVAS
CHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSRQNLVIIKGKDRTDQILRIGEATEQRMIVTFSNGKPYFYARENVAWLSNPGRITIDH
CCCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCEEEEEECCEEEECCCCEEEEEE
CQVLVEGDLLFDIEEVLRFETWVKIFRRNGESRCCLFSDFSVQRMSSSDGRSTDVLAYFR
EEEEECCCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHH
ELAETTGLMTNDNKSMMAMKYRNLGVVSGRSILSSFLQARPPGSGTVPSDLIFPFGCNMS
HHHHHCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCH
QKMAVQRAIEHPVSLIQGPPGTGKTQTILNLIGNMLLRRKRVAVVSSNNSATANVLEKLQ
HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
KYELDFVAASLGSAENKQVFIEGQSSDVVQMPTFQADQEASVLQEISLLNTSLDNAFAEK
HHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NGLAVIIQQIDALKLEMAHFEKYCDETNGGDLRVIDRAMNAELSARKLLHAWLASEKELK
CCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCHHHHH
RYAKAGVASPSNRRVGFLKKIGFLLRFGTAGSAFFEVSVRERIPLLQKAYYLRKLADMEQ
HHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHH
RRKTLEGSLAGFHFDERLERLTELSMQLLKHRLAQHYNNRERRIFALEDLRNQPEKFLEE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHH
YPVILSTTFSIITSLKSGYLFDCVIVDEASQVDLLSGVLAMGCAEKLVIVGDSMQLPNVL
CCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
TAQDEKQAKEVALQYDLPDYARFERHNLLSAVRTAFPDIPETLLLEHYRCHPKIIQFCNQ
CCCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCC
KFYGGELLVMTRDQGEADVLKAYMTVEGRHARGTINQRQVDEITQNVLPELASIHPADIG
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IVSPFRAQADRMLLSVGSNEIGIDTVHKYQGREKRAIIITTVSNKSNEFVDNPNLLNVAV
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH
SRAKEKLRLVVSMEMADGNSNVADLVRYIRYNNCEVIPGRVRSVFDLLYQDYTAARLAVL
HHHHHHEEEEEEEEECCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
KKWKRVSIYDSENLVYSEIDAVLQEKAYRGLGIVFQFPLSMLVRNRENLTTEESSYAAHP
HHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WTKTDFLVYRRVDKSPVLVIEVDGYAFHREGTRQAERDALKDAVLEKCGLPILRLSTIGS
CCCCCEEEEEECCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC
DERNRIRKKLEDVVAS
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]