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The map label for this gene is dedA [H]

Identifier: 119356145

GI number: 119356145

Start: 336916

End: 337584

Strand: Direct

Name: dedA [H]

Synonym: Cpha266_0303

Alternate gene names: 119356145

Gene position: 336916-337584 (Clockwise)

Preceding gene: 119356141

Following gene: 119356146

Centisome position: 10.75

GC content: 42.15

Gene sequence:

>669_bases
ATGGATAATTCATTCACAGGAATACTTTCGACGATTATTGATTTTATTCTCCACATCGACACTCATCTGCAGGCGCTTGC
ATCCGAATACGGCATCTGGTTGTATGGCATACTGTTTTTGATCATTTTTTGTGAAACGGGCCTTGTTGTTACGCCATTTC
TTCCCGGTGACTCTCTGCTTTTTGCTGCAGGATCGCTTGCCTCCATGCCCGGTTCCGAGCTTGATCAGCATCTGCTTTTT
CTGATCTTTTTTGTAGCGGCAGTGCTTGGAGATACGCTTAATTACACGATTGGGCACAAGCTCGGCCCAAAAGTATTCGG
CTATGAGAAAACAAGATTTTTCAATCCCGACTATCTGGACAAAACCAATGCGTTTTTTAAAAAATATGGAGGCAAAACAA
TAATCATCGCCCGGTTCATTCCGATTATCAGAACTTTTGCGCCGTTTGTTGCCGGCATCGGCGCCATGTCTTACAAAAAA
TTCATTCTTTTCAATATTATTGGCGCACTTTTGTGGGTTGGTCTGTTTAATTACAGCGGTTACTTTTTTGGACAGCTTCC
TTTTGTTCAGAAAAACTTCAAGCTCCTGATTTTATTTATTATTATAATTTCGGTTTTACCTCCGGTGTTCGAGTATCTCA
AGCACCGGTTTCGTCGCAGTGGCCAATAG

Upstream 100 bases:

>100_bases
CCTTGCGATACCCGTGAAATCCGTTTTGCTACCAAGAGGGGCAATCGCTACATTACCCATGCTGTTTTACTCCGCACACT
TTCACAGTCAGACGCGCTTT

Downstream 100 bases:

>100_bases
TGATCCACTCAACCGAAAAGCCATGCGGGTCAATGTGTATAACTGTTCAAAAAATGTTGATAACGTGTTGATGGCGCTGT
TGACAGGGGTGTTGATTACT

Product: DedA protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MDNSFTGILSTIIDFILHIDTHLQALASEYGIWLYGILFLIIFCETGLVVTPFLPGDSLLFAAGSLASMPGSELDQHLLF
LIFFVAAVLGDTLNYTIGHKLGPKVFGYEKTRFFNPDYLDKTNAFFKKYGGKTIIIARFIPIIRTFAPFVAGIGAMSYKK
FILFNIIGALLWVGLFNYSGYFFGQLPFVQKNFKLLILFIIIISVLPPVFEYLKHRFRRSGQ

Sequences:

>Translated_222_residues
MDNSFTGILSTIIDFILHIDTHLQALASEYGIWLYGILFLIIFCETGLVVTPFLPGDSLLFAAGSLASMPGSELDQHLLF
LIFFVAAVLGDTLNYTIGHKLGPKVFGYEKTRFFNPDYLDKTNAFFKKYGGKTIIIARFIPIIRTFAPFVAGIGAMSYKK
FILFNIIGALLWVGLFNYSGYFFGQLPFVQKNFKLLILFIIIISVLPPVFEYLKHRFRRSGQ
>Mature_222_residues
MDNSFTGILSTIIDFILHIDTHLQALASEYGIWLYGILFLIIFCETGLVVTPFLPGDSLLFAAGSLASMPGSELDQHLLF
LIFFVAAVLGDTLNYTIGHKLGPKVFGYEKTRFFNPDYLDKTNAFFKKYGGKTIIIARFIPIIRTFAPFVAGIGAMSYKK
FILFNIIGALLWVGLFNYSGYFFGQLPFVQKNFKLLILFIIIISVLPPVFEYLKHRFRRSGQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=60.7843137254902, Blast_Score=271, Evalue=2e-74,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=35.7142857142857, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789384, Length=194, Percent_Identity=30.4123711340206, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25094; Mature: 25094

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSFTGILSTIIDFILHIDTHLQALASEYGIWLYGILFLIIFCETGLVVTPFLPGDSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
FAAGSLASMPGSELDQHLLFLIFFVAAVLGDTLNYTIGHKLGPKVFGYEKTRFFNPDYLD
HHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCH
KTNAFFKKYGGKTIIIARFIPIIRTFAPFVAGIGAMSYKKFILFNIIGALLWVGLFNYSG
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YFFGQLPFVQKNFKLLILFIIIISVLPPVFEYLKHRFRRSGQ
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNSFTGILSTIIDFILHIDTHLQALASEYGIWLYGILFLIIFCETGLVVTPFLPGDSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
FAAGSLASMPGSELDQHLLFLIFFVAAVLGDTLNYTIGHKLGPKVFGYEKTRFFNPDYLD
HHCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHCCCCCCCCH
KTNAFFKKYGGKTIIIARFIPIIRTFAPFVAGIGAMSYKKFILFNIIGALLWVGLFNYSG
HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YFFGQLPFVQKNFKLLILFIIIISVLPPVFEYLKHRFRRSGQ
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]