Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356136

Identifier: 119356136

GI number: 119356136

Start: 318232

End: 319209

Strand: Reverse

Name: 119356136

Synonym: Cpha266_0294

Alternate gene names: NA

Gene position: 319209-318232 (Counterclockwise)

Preceding gene: 119356137

Following gene: 119356127

Centisome position: 10.19

GC content: 52.86

Gene sequence:

>978_bases
ATGAAACGCAAGATTCATCTCTCGCATCTCCTCGTTGCGTTATTGCTTTCACTCTGGCTGCCAATGTATGGGTGCAGTAC
GCCTCATTCAGCAACTGAAGACATATCGCAGCAGCCAACTGCCGGCATAAGCGGAATGGCGCAGATCGACGGCAACTCCT
GGCTCGTCGTTCACGATGCGCTATCGTTTGAAAACGGCCCAAGAATGTCGATCATAACGCTATCGGTAGATGCGGCACCG
GTTCTCCATCCTGTCACGATTGACTCCTGGCCGGACGCCGGCGGCCAGGCAAGCGATCTTGAGTCACTGTGCCCGGTTCC
CTCTCATCCGAACGAATATCTCATGGCTGAATCAGGAACATGGAAGGAAAAAGGCGGACGATTATTTCATCTTCGCCTCA
ACGCTTTAACAAGACAGGCTGCAATTCTTGGCGTCATGAAACTGCCGGTACTGGCGGATAACAACCCTCAACAGGTTGGC
GATCAGTATGAGGCTCTTGCATGCGTACGAGGGGCAGACGGCAGATTGTTGCTCCTGCTTGGCGAAAGAGGGGGATCACA
ACGATTTCCGGAGGGGGTTATTCGATGGGGCGTTCTTGATATCGAGCGCCATGAGCTTCAGTTCACCGAAAAGGGGCTTG
AAGGAGTGAAGGTCAATGCTCCCGGCAAATGGAAAAACGAGCTGACAAACAGGGATATCAGTGATATGTATATCTCTCCC
GAAGGTGAGATCTGGGTATCGGCCGCAGAAGACAACGGAGATAACGGACCGTTCACTTCAGTGATCTACTCTCCGGGCAG
AATTTCCGGTAATTTCAGTTTACCTGTTATTGCCAATCGGCATTCCGGGGTCTGGCGGACTATCGGCTCTCTCAAGATCG
AGGCACTGAGCGGACCTGCCGAATCTGTCGCAGGAAGCCGTATGAGCATCGGCAGCGACGACGAAAATTATGGCGGCATC
TGGAGGCCTGTGGAATAA

Upstream 100 bases:

>100_bases
CGAATGCTTTCTGCGTCGTGTCAGTCAATTCCGAAGTACAATAACTTTTTTGAGGTTCCGGGGTAACAGCAACTTGTCGA
ACAACTGATATCGTACTCTT

Downstream 100 bases:

>100_bases
TCCGCCTGAAACAGCCTGAATTCCGACTTTCCGCACTAATTGGCAGAAGTCGGGATTCTTGTTTTCCGCTCACATCAAAT
CAACCTCGCACCGCCATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP
VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG
DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP
EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI
WRPVE

Sequences:

>Translated_325_residues
MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP
VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG
DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP
EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI
WRPVE
>Mature_325_residues
MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDALSFENGPRMSIITLSVDAAP
VLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGTWKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVG
DQYEALACVRGADGRLLLLLGERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP
EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPAESVAGSRMSIGSDDENYGGI
WRPVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35251; Mature: 35251

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDA
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEE
LSFENGPRMSIITLSVDAAPVLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGT
ECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCC
WKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVGDQYEALACVRGADGRLLLLL
CHHCCCEEEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEECCCCCEEEEE
GERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP
CCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHEEECC
EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPA
CCCEEEEEECCCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCEEECCCEEEEEECCCH
ESVAGSRMSIGSDDENYGGIWRPVE
HHHCCCEEECCCCCCCCCCEECCCC
>Mature Secondary Structure
MKRKIHLSHLLVALLLSLWLPMYGCSTPHSATEDISQQPTAGISGMAQIDGNSWLVVHDA
CCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEE
LSFENGPRMSIITLSVDAAPVLHPVTIDSWPDAGGQASDLESLCPVPSHPNEYLMAESGT
ECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCC
WKEKGGRLFHLRLNALTRQAAILGVMKLPVLADNNPQQVGDQYEALACVRGADGRLLLLL
CHHCCCEEEEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEECCCCCEEEEE
GERGGSQRFPEGVIRWGVLDIERHELQFTEKGLEGVKVNAPGKWKNELTNRDISDMYISP
CCCCCCCCCCCHHHEECEEEEEHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCHHEEECC
EGEIWVSAAEDNGDNGPFTSVIYSPGRISGNFSLPVIANRHSGVWRTIGSLKIEALSGPA
CCCEEEEEECCCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCEEECCCEEEEEECCCH
ESVAGSRMSIGSDDENYGGIWRPVE
HHHCCCEEECCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA