| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356127
Identifier: 119356127
GI number: 119356127
Start: 313519
End: 314508
Strand: Reverse
Name: 119356127
Synonym: Cpha266_0284
Alternate gene names: NA
Gene position: 314508-313519 (Counterclockwise)
Preceding gene: 119356136
Following gene: 119356126
Centisome position: 10.04
GC content: 45.86
Gene sequence:
>990_bases ATGGAAGCCTTGGCAGTAATAGCACCACTGGATTATGTGGTCGAACCCGCAACATATCTCCGAGACCAAGAATACGACTA TCTTGTAAAAGGAATAGTTTTTGGAAAAAAGTTTGTCTGGTGCGTCAACATTAAAACTCGTCTCACCAGGACAGGTGAAA TGCAGCTTCTGATCGGAAAAGATAAAGCGCTACATCCGTTGTTGCTTGTGACCGGATACGTTCCGCCCGAGGCCGCTGAT AGATTGCGGAGCATAGGCATCGAGTTTATCGACAAGGCAGGAAACATGTTCATTAACCAACCCCCGCTGTTGATTTTCGT TAAAGGCAATAAACCTGAAAAAGAAAAAAACACCATGCCCGGCACCCGTCTTTTCAAGGGAGTTGGGCTGAAGATTGTCT ATCTCCTTTTATGCAGACCGGATCTCGTCAACAGTTCTTATCGTGATCTTTCAGAAATGACCGGTGTCGCTTTGGGAACG GTAAACACGACCATAACCGAACTGCTCATGAAAGACTTCATCCTCGACATGGGCAAAAGAGGGAAAAAAATCCTGAACAG GAAAAAGCTCTTTGAACGGTGGGTTGAGGCATATCCTGATTACCTGAAACCAAAACTGTTTTTGGGTCGGTTCCATGGTG ATGAGTTCTGGTGGAAAAACACTAATCTCGATCCTGCCTCCGCGCAATGGGGCGGAGAGATAGCCGCTTCGAAACTCACC GGCTACCTTAAGCCTGGCAGCGCAGCACTCTATACCGACAAAAAATTCCTGACGGATTTGGTTATTACTAACAGGCTGAA AAAAGATCCTCAGGGAAATGTTGAAATTTTCGAACGATTCTGGCCAATGGACTATGGGTTCGGCGATCTTGACACGACGC ATCCGATCATCATCTACGCTGATCTTCTTGCGATAGGGGACCAAAGAACCACGGAAACTGCAAAAATGATCTATGAACAA TATCTCGATCAATATTTCCGGCAGGATTGA
Upstream 100 bases:
>100_bases TTGATTTATGTTCATTATATTTGTATGTTCAATAATTATGAACAAAGAAAATATCGAACATAAATTCGCCGACAATGAAG GAATAATCCTTCATCAGGCT
Downstream 100 bases:
>100_bases TCCAGAGAGAGTAACGCTTCTCAGGGATATCAAGGAAGTTGCCGATGGGCTTGCTATACATTTCTTCGTAGTGGGCGCTT TTGCTCGCGACCTGAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MEALAVIAPLDYVVEPATYLRDQEYDYLVKGIVFGKKFVWCVNIKTRLTRTGEMQLLIGKDKALHPLLLVTGYVPPEAAD RLRSIGIEFIDKAGNMFINQPPLLIFVKGNKPEKEKNTMPGTRLFKGVGLKIVYLLLCRPDLVNSSYRDLSEMTGVALGT VNTTITELLMKDFILDMGKRGKKILNRKKLFERWVEAYPDYLKPKLFLGRFHGDEFWWKNTNLDPASAQWGGEIAASKLT GYLKPGSAALYTDKKFLTDLVITNRLKKDPQGNVEIFERFWPMDYGFGDLDTTHPIIIYADLLAIGDQRTTETAKMIYEQ YLDQYFRQD
Sequences:
>Translated_329_residues MEALAVIAPLDYVVEPATYLRDQEYDYLVKGIVFGKKFVWCVNIKTRLTRTGEMQLLIGKDKALHPLLLVTGYVPPEAAD RLRSIGIEFIDKAGNMFINQPPLLIFVKGNKPEKEKNTMPGTRLFKGVGLKIVYLLLCRPDLVNSSYRDLSEMTGVALGT VNTTITELLMKDFILDMGKRGKKILNRKKLFERWVEAYPDYLKPKLFLGRFHGDEFWWKNTNLDPASAQWGGEIAASKLT GYLKPGSAALYTDKKFLTDLVITNRLKKDPQGNVEIFERFWPMDYGFGDLDTTHPIIIYADLLAIGDQRTTETAKMIYEQ YLDQYFRQD >Mature_329_residues MEALAVIAPLDYVVEPATYLRDQEYDYLVKGIVFGKKFVWCVNIKTRLTRTGEMQLLIGKDKALHPLLLVTGYVPPEAAD RLRSIGIEFIDKAGNMFINQPPLLIFVKGNKPEKEKNTMPGTRLFKGVGLKIVYLLLCRPDLVNSSYRDLSEMTGVALGT VNTTITELLMKDFILDMGKRGKKILNRKKLFERWVEAYPDYLKPKLFLGRFHGDEFWWKNTNLDPASAQWGGEIAASKLT GYLKPGSAALYTDKKFLTDLVITNRLKKDPQGNVEIFERFWPMDYGFGDLDTTHPIIIYADLLAIGDQRTTETAKMIYEQ YLDQYFRQD
Specific function: Unknown
COG id: COG4861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37671; Mature: 37671
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALAVIAPLDYVVEPATYLRDQEYDYLVKGIVFGKKFVWCVNIKTRLTRTGEMQLLIGK CCCEEEECCHHHHHCCHHHHCCCCHHHHHHHHHHCCEEEEEEECHHHEECCCCEEEEEEC DKALHPLLLVTGYVPPEAADRLRSIGIEFIDKAGNMFINQPPLLIFVKGNKPEKEKNTMP CCCCCCEEEEECCCCCHHHHHHHHHCHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCCC GTRLFKGVGLKIVYLLLCRPDLVNSSYRDLSEMTGVALGTVNTTITELLMKDFILDMGKR HHHHHHHCCHHHHHHHHHCCHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCHH GKKILNRKKLFERWVEAYPDYLKPKLFLGRFHGDEFWWKNTNLDPASAQWGGEIAASKLT HHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHH GYLKPGSAALYTDKKFLTDLVITNRLKKDPQGNVEIFERFWPMDYGFGDLDTTHPIIIYA CCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE DLLAIGDQRTTETAKMIYEQYLDQYFRQD HHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEALAVIAPLDYVVEPATYLRDQEYDYLVKGIVFGKKFVWCVNIKTRLTRTGEMQLLIGK CCCEEEECCHHHHHCCHHHHCCCCHHHHHHHHHHCCEEEEEEECHHHEECCCCEEEEEEC DKALHPLLLVTGYVPPEAADRLRSIGIEFIDKAGNMFINQPPLLIFVKGNKPEKEKNTMP CCCCCCEEEEECCCCCHHHHHHHHHCHHHHHCCCCEEECCCCEEEEEECCCCCHHHCCCC GTRLFKGVGLKIVYLLLCRPDLVNSSYRDLSEMTGVALGTVNTTITELLMKDFILDMGKR HHHHHHHCCHHHHHHHHHCCHHCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCHH GKKILNRKKLFERWVEAYPDYLKPKLFLGRFHGDEFWWKNTNLDPASAQWGGEIAASKLT HHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHH GYLKPGSAALYTDKKFLTDLVITNRLKKDPQGNVEIFERFWPMDYGFGDLDTTHPIIIYA CCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE DLLAIGDQRTTETAKMIYEQYLDQYFRQD HHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA