| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356126
Identifier: 119356126
GI number: 119356126
Start: 312684
End: 313556
Strand: Reverse
Name: 119356126
Synonym: Cpha266_0283
Alternate gene names: NA
Gene position: 313556-312684 (Counterclockwise)
Preceding gene: 119356127
Following gene: 119356113
Centisome position: 10.01
GC content: 43.76
Gene sequence:
>873_bases ATGAACAATATCTCGATCAATATTTCCGGCAGGATTGATCCAGAGAGAGTAACGCTTCTCAGGGATATCAAGGAAGTTGC CGATGGGCTTGCTATACATTTCTTCGTAGTGGGCGCTTTTGCTCGCGACCTGAACTTTGAACACATTCATCACATCCCTG CCCCTCGAGTGACAGAAGACATCGATATTGGCGTCGAGGTAGCTGATTGGGAAACATTCCGGTATTTAACTGATTCCCTG ATTGATCGTGATATTCTAAAGCCTACGAAATCAGCTCACCGCTTCACAGGCAACTCACCTGCTATTGTTGTAGATATCAT ACCCTATGGAGGGATTAGCAATGAACTGAAAAAAATCAGTTGGCCTCCTGATCACAGGATCATCATGAGCATGCTCGGAT TTGAAGAAGCTTTTCAATCAGCAATGGCGGTATGTCTTGAGACCGAGCCTCTGTTGGAAATACTGGTACCTTCCGTTCCT GCGCTAACTGTCATGAAAATCATCTCCTGGAACGACGCATATCCAAATCGAAATCGGGATGCCCGTGACATTCTCTTCAT TTTGGAAAACTATCACGTTATTGTCTCAGAATACCTCTACGAACCTCCTGCCGTCTTGCTCGAAGAAGAAGCATTCGATC TTTGCTTAGCTTCCGTTCGATTGCTCGGAAGGAAAATAGCACAGTTGTGCAGTAAAATTACAAAAGAAACAATCGTGATA ATCCTTGACCGTGAATCTGAAGAAAATGGGGAAGTCAAGATGCTCAGCCAAATGGGAAGTGCTGGTTCTTTTCAGACAAA ACAATTTGAGAATTCCCTGAAACTCCTGAAAAAGCTTCTTCAAGGAATTCGAGAGGAAACAACCAAAGTCTAA
Upstream 100 bases:
>100_bases TATGGGTTCGGCGATCTTGACACGACGCATCCGATCATCATCTACGCTGATCTTCTTGCGATAGGGGACCAAAGAACCAC GGAAACTGCAAAAATGATCT
Downstream 100 bases:
>100_bases ACCGTCCCCCTCTTCGCTACTTGCCCTGTCCGCCTCTCCGGGATTGCTGTTACCGCCTGCATGCTCATCCAGCCTTCAGC TGTAAGGAATGGGCCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNNISINISGRIDPERVTLLRDIKEVADGLAIHFFVVGAFARDLNFEHIHHIPAPRVTEDIDIGVEVADWETFRYLTDSL IDRDILKPTKSAHRFTGNSPAIVVDIIPYGGISNELKKISWPPDHRIIMSMLGFEEAFQSAMAVCLETEPLLEILVPSVP ALTVMKIISWNDAYPNRNRDARDILFILENYHVIVSEYLYEPPAVLLEEEAFDLCLASVRLLGRKIAQLCSKITKETIVI ILDRESEENGEVKMLSQMGSAGSFQTKQFENSLKLLKKLLQGIREETTKV
Sequences:
>Translated_290_residues MNNISINISGRIDPERVTLLRDIKEVADGLAIHFFVVGAFARDLNFEHIHHIPAPRVTEDIDIGVEVADWETFRYLTDSL IDRDILKPTKSAHRFTGNSPAIVVDIIPYGGISNELKKISWPPDHRIIMSMLGFEEAFQSAMAVCLETEPLLEILVPSVP ALTVMKIISWNDAYPNRNRDARDILFILENYHVIVSEYLYEPPAVLLEEEAFDLCLASVRLLGRKIAQLCSKITKETIVI ILDRESEENGEVKMLSQMGSAGSFQTKQFENSLKLLKKLLQGIREETTKV >Mature_290_residues MNNISINISGRIDPERVTLLRDIKEVADGLAIHFFVVGAFARDLNFEHIHHIPAPRVTEDIDIGVEVADWETFRYLTDSL IDRDILKPTKSAHRFTGNSPAIVVDIIPYGGISNELKKISWPPDHRIIMSMLGFEEAFQSAMAVCLETEPLLEILVPSVP ALTVMKIISWNDAYPNRNRDARDILFILENYHVIVSEYLYEPPAVLLEEEAFDLCLASVRLLGRKIAQLCSKITKETIVI ILDRESEENGEVKMLSQMGSAGSFQTKQFENSLKLLKKLLQGIREETTKV
Specific function: Unknown
COG id: COG4849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32802; Mature: 32802
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNISINISGRIDPERVTLLRDIKEVADGLAIHFFVVGAFARDLNFEHIHHIPAPRVTED CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC IDIGVEVADWETFRYLTDSLIDRDILKPTKSAHRFTGNSPAIVVDIIPYGGISNELKKIS CCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCC WPPDHRIIMSMLGFEEAFQSAMAVCLETEPLLEILVPSVPALTVMKIISWNDAYPNRNRD CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ARDILFILENYHVIVSEYLYEPPAVLLEEEAFDLCLASVRLLGRKIAQLCSKITKETIVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ILDRESEENGEVKMLSQMGSAGSFQTKQFENSLKLLKKLLQGIREETTKV EEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNISINISGRIDPERVTLLRDIKEVADGLAIHFFVVGAFARDLNFEHIHHIPAPRVTED CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC IDIGVEVADWETFRYLTDSLIDRDILKPTKSAHRFTGNSPAIVVDIIPYGGISNELKKIS CCCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHHCC WPPDHRIIMSMLGFEEAFQSAMAVCLETEPLLEILVPSVPALTVMKIISWNDAYPNRNRD CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ARDILFILENYHVIVSEYLYEPPAVLLEEEAFDLCLASVRLLGRKIAQLCSKITKETIVI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ILDRESEENGEVKMLSQMGSAGSFQTKQFENSLKLLKKLLQGIREETTKV EEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA