| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356096
Identifier: 119356096
GI number: 119356096
Start: 279379
End: 279585
Strand: Reverse
Name: 119356096
Synonym: Cpha266_0249
Alternate gene names: NA
Gene position: 279585-279379 (Counterclockwise)
Preceding gene: 119356097
Following gene: 119356095
Centisome position: 8.92
GC content: 51.69
Gene sequence:
>207_bases ATGAAGGATATAGCTGAATTTGTCCGCGACAGACGAAAAGCCCTGGGCATGACCCAGCCGGAACTGGCAGAAAAAGCCGG TACAGGTCTTCGTTTTATCCGTGATCTTGAACAGGGAAAAAAAACATTGCGGATGGACAAGGTGAACCAGGTGCTTGCCC TGTTCGGGTTCGTACTTGCGCCTGTAAGCCCGGAAAGGGAGGCTTAG
Upstream 100 bases:
>100_bases ACGGGTATAATCTTATTATTTCCACTTGCCATTATACCCGCAAAGGTATAGATTGACTATAAATCACAAACAGTATACCC GATCAGGTGTCACAGAAATC
Downstream 100 bases:
>100_bases CGTATGCAGAAAGCCGAAATACGATACCTTGACCGAACTGCGGGCTGGTTCATTCAGGATGAAGAGGGCTTTCATTTCCT GTATGATCAGGCATACCTGG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MKDIAEFVRDRRKALGMTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGFVLAPVSPEREA
Sequences:
>Translated_68_residues MKDIAEFVRDRRKALGMTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGFVLAPVSPEREA >Mature_68_residues MKDIAEFVRDRRKALGMTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGFVLAPVSPEREA
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7688; Mature: 7688
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIAEFVRDRRKALGMTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGFVLA CHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PVSPEREA CCCCCCCC >Mature Secondary Structure MKDIAEFVRDRRKALGMTQPELAEKAGTGLRFIRDLEQGKKTLRMDKVNQVLALFGFVLA CHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PVSPEREA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA