| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is hipA [C]
Identifier: 119356095
GI number: 119356095
Start: 279052
End: 279375
Strand: Reverse
Name: hipA [C]
Synonym: Cpha266_0248
Alternate gene names: 119356095
Gene position: 279375-279052 (Counterclockwise)
Preceding gene: 119356096
Following gene: 119356094
Centisome position: 8.91
GC content: 51.23
Gene sequence:
>324_bases ATGCAGAAAGCCGAAATACGATACCTTGACCGAACTGCGGGCTGGTTCATTCAGGATGAAGAGGGCTTTCATTTCCTGTA TGATCAGGCATACCTGGATTCGAAGGATGCCAGACCGGTAAGTCTGACTCTGCCGTTGCGGGCAGCTGCATATTCGAGCA GAACAATGTTTCCTTTTTTTGACGGATTGATACCCGAAGGGTGGCTGCTTGCCGTTGCCGAAAGGAACTGGAAGCTTGAT CCGCGAGATCGTATGGGTCTCTTGCTGAACTGCTGCAGGGATTGCATCGGGGCGGTGAGTGTACATCCTGTAATCATGGA GTGA
Upstream 100 bases:
>100_bases ACAGGGAAAAAAAACATTGCGGATGGACAAGGTGAACCAGGTGCTTGCCCTGTTCGGGTTCGTACTTGCGCCTGTAAGCC CGGAAAGGGAGGCTTAGCGT
Downstream 100 bases:
>100_bases GCCGATGGATCGTCGCTGTCTTTATTGCTATGAGCCGTTGGCCTCCGGGGAGGGTGATTTCCATCGGAAGTGCAGCCGGA AAATGTTCGGAACGCCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: HipA N-Terminal Domain-Containing Protein; HipA N-Terminal Domain Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQKAEIRYLDRTAGWFIQDEEGFHFLYDQAYLDSKDARPVSLTLPLRAAAYSSRTMFPFFDGLIPEGWLLAVAERNWKLD PRDRMGLLLNCCRDCIGAVSVHPVIME
Sequences:
>Translated_107_residues MQKAEIRYLDRTAGWFIQDEEGFHFLYDQAYLDSKDARPVSLTLPLRAAAYSSRTMFPFFDGLIPEGWLLAVAERNWKLD PRDRMGLLLNCCRDCIGAVSVHPVIME >Mature_107_residues MQKAEIRYLDRTAGWFIQDEEGFHFLYDQAYLDSKDARPVSLTLPLRAAAYSSRTMFPFFDGLIPEGWLLAVAERNWKLD PRDRMGLLLNCCRDCIGAVSVHPVIME
Specific function: Unbalanced Or Excessive Expression Of Hipa Is Toxic To The Cell. [C]
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12341; Mature: 12341
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKAEIRYLDRTAGWFIQDEEGFHFLYDQAYLDSKDARPVSLTLPLRAAAYSSRTMFPFF CCCCCEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCHHH DGLIPEGWLLAVAERNWKLDPRDRMGLLLNCCRDCIGAVSVHPVIME CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MQKAEIRYLDRTAGWFIQDEEGFHFLYDQAYLDSKDARPVSLTLPLRAAAYSSRTMFPFF CCCCCEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCHHH DGLIPEGWLLAVAERNWKLDPRDRMGLLLNCCRDCIGAVSVHPVIME CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA