| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ispG [H]
Identifier: 119356072
GI number: 119356072
Start: 249984
End: 252017
Strand: Direct
Name: ispG [H]
Synonym: Cpha266_0225
Alternate gene names: 119356072
Gene position: 249984-252017 (Clockwise)
Preceding gene: 119356071
Following gene: 119356073
Centisome position: 7.98
GC content: 47.05
Gene sequence:
>2034_bases ATGTTTCAATATCGTCGGCGTTTTACACGTGAAGTACCTTTTGGAAAGATTGCTCTGGGCGGATATATGCCTATAAGAGT TGAGTCGATGACCAATACCCACACACTTGATACGGTGGCAACGGTTAAACAGTGCCGTCGTCTTTATGAGGCGGGTTGTG AAATCATACGATTAACCGTCCCGACTGAACGAGATGCTGAAAATCTGAGGTCTATAAGGGATCAGCTCCGAAGTGACGGT ATTGATACGCCTCTTGTTGCCGATATTCATTTTTCCTCTCGTGCCGCATTCAAGGCTGTCGAGTTTGTTGAAAACATCAG AATCAATCCTGGCAATTATGCCACAAAGCAGAAGTTTTCGGCAGAAACTTATACTGACGACGAATACCAGGAAGAGATTG AACGGGTTCGCAAGGAGTTTCTTCCCCTGGTTTACAAGGCTCGTGAATTTGGGGCATCCATGAGGATCGGTACCAACCAT GGATCTTTGTCCGATCGTATAGTGAGCCGATATGGCAATTCTCCTGAGGGTATGGTTGAGGCTGCCCTGGAGTTTGCGAG AATCTGTGAAGAGGAAGGATATCATGATGTCTTGTTTTCGATGAAATCTTCCAATGTCAAGGTGATGATACAAGCGTATC GTCTGCTTGCCGTCAAGGCTGACGCTGAGTTGCGTTATGCTTATCCCCTTCATCTTGGCGTGACTGAAGCAGGCGACGGC GATGAGGGTCGTGTCAAATCGGCTATGGGAATTGGTGCCCTTCTGGAGGACGGCCTTGGCGATACCATACGAGTTTCGTT GACGGAAGATCCTGTAAATGAGGTCCCGGTAGGTTTTGCCATTGTGAAAAAATACAATGATCTGCAATTGATAAGAGGCG AAAACGGGCATGTTCCGATAAAGCAGCTCATTGAAAATCAAGGCTCTTCTTTCACGAATGAGTTGCCGCCTTTTGACCCT TTCAGTTATCAACGCAGGATTTCCCGTTCTTTTTTTGTCGGAGGGTTTGCCATAGGAGGTGATTCGATGCCGAGGGTTGA AACCGAGGCCGTAATTCCCTTATGTCGGCCTGAAGAGCTGTTTCATGAGATCATGCAGCGACTTCTTCCCGAAGAGTCAA TTGACGCCATTCGGTCAGAATTGGTTGGTGTTCGTGTCAACACCGTTGAAGATCTTGAACTTCTTGATGAGCTCTTAAGC CGACTCGGCGAAGCAAAACGTTTTATTACGGTTTCAACAAAGGATATCGAACTGTTTTTTCGGCTTCTTGACAAGGTGGA AAAGGTAAGACTTGATATTACGGAAGGCGAGATGCTTGACAGGAATATTTTCGATCGTCTGACTAATGATCGACTCGCAT CGGTAGAGTTTTGCTTTCTTCATGAAACAAGCGGGGCCGGTGTGCCGGCTGAGGTTCTTGGACTGCTTGCGCAAAAGGCC GGATTGCAGGGTCTCGAAAGGATCTTTTTTTCCATTCTCTCCGCTCATTCGGTTTTCGTCTATCGCAGGCTTGTTCAGTT TTTCAGTAAAAGGGGTTTTGATTATCCCCTTGTTATCCGTTTCAGGCAGATGGATTCTGTTAAGCTTGATTGTCTTATCA GTTGCGCAGTGCAAACCGGATCGCTTTTTTCGGATGGCATCGGAGATGTTCTTGCTCTTCAAACAGGCCTCGATGTTGCC GCTGAAATCACTCTTGCATTCAATATACTTCAGGGCGCGCGTATCAGAATGTCTAAAACCGAATTCATATCCTGTCCGGG ATGCGGCAGAACCTATTTTGATCTTGAAAAAGCAGCAGCATCGATCAAGCTGCGACTATCGCACCTCAAGGGATTGAAAG TTGGTATTATGGGCTGCGTTGTCAACGGACCGGGAGAAATGGCTGATGCCGATTTTGGTTATGTTGGTTCCGGGAAAGGA CGGATCAGTCTATATGTTGGCAAGGAGTGCGTTGAAGAGAATCTCCCTGAAAGTGCCGCGGTTGACCGTTTGGTCGGGCT TATCCAGGAAAAAGGCAAATGGGTGAATCCCTGA
Upstream 100 bases:
>100_bases GCAAGAGAAAAATACAATTTCAGAAAAGAGGGAGAAATCCTGTTTATTATCAGAAATAAATAGCTTTACGGTCATTATTA TGCATCAGTTTCCGCTTTCA
Downstream 100 bases:
>100_bases ATACCTGAATAGCATCGTGCGCAAGGCCGGTCTGATGCTTGGTCAATCGTTATTTTATTTGAGTCTCTATGCTTTTTACG CTGGTGACGGGCGCTTCAAT
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MFQYRRRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTVPTERDAENLRSIRDQLRSDG IDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQKFSAETYTDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNH GSLSDRIVSRYGNSPEGMVEAALEFARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDG DEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEVPVGFAIVKKYNDLQLIRGENGHVPIKQLIENQGSSFTNELPPFDP FSYQRRISRSFFVGGFAIGGDSMPRVETEAVIPLCRPEELFHEIMQRLLPEESIDAIRSELVGVRVNTVEDLELLDELLS RLGEAKRFITVSTKDIELFFRLLDKVEKVRLDITEGEMLDRNIFDRLTNDRLASVEFCFLHETSGAGVPAEVLGLLAQKA GLQGLERIFFSILSAHSVFVYRRLVQFFSKRGFDYPLVIRFRQMDSVKLDCLISCAVQTGSLFSDGIGDVLALQTGLDVA AEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAASIKLRLSHLKGLKVGIMGCVVNGPGEMADADFGYVGSGKG RISLYVGKECVEENLPESAAVDRLVGLIQEKGKWVNP
Sequences:
>Translated_677_residues MFQYRRRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTVPTERDAENLRSIRDQLRSDG IDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQKFSAETYTDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNH GSLSDRIVSRYGNSPEGMVEAALEFARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDG DEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEVPVGFAIVKKYNDLQLIRGENGHVPIKQLIENQGSSFTNELPPFDP FSYQRRISRSFFVGGFAIGGDSMPRVETEAVIPLCRPEELFHEIMQRLLPEESIDAIRSELVGVRVNTVEDLELLDELLS RLGEAKRFITVSTKDIELFFRLLDKVEKVRLDITEGEMLDRNIFDRLTNDRLASVEFCFLHETSGAGVPAEVLGLLAQKA GLQGLERIFFSILSAHSVFVYRRLVQFFSKRGFDYPLVIRFRQMDSVKLDCLISCAVQTGSLFSDGIGDVLALQTGLDVA AEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAASIKLRLSHLKGLKVGIMGCVVNGPGEMADADFGYVGSGKG RISLYVGKECVEENLPESAAVDRLVGLIQEKGKWVNP >Mature_677_residues MFQYRRRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTVPTERDAENLRSIRDQLRSDG IDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQKFSAETYTDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNH GSLSDRIVSRYGNSPEGMVEAALEFARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDG DEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEVPVGFAIVKKYNDLQLIRGENGHVPIKQLIENQGSSFTNELPPFDP FSYQRRISRSFFVGGFAIGGDSMPRVETEAVIPLCRPEELFHEIMQRLLPEESIDAIRSELVGVRVNTVEDLELLDELLS RLGEAKRFITVSTKDIELFFRLLDKVEKVRLDITEGEMLDRNIFDRLTNDRLASVEFCFLHETSGAGVPAEVLGLLAQKA GLQGLERIFFSILSAHSVFVYRRLVQFFSKRGFDYPLVIRFRQMDSVKLDCLISCAVQTGSLFSDGIGDVLALQTGLDVA AEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAASIKLRLSHLKGLKVGIMGCVVNGPGEMADADFGYVGSGKG RISLYVGKECVEENLPESAAVDRLVGLIQEKGKWVNP
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=281, Percent_Identity=40.2135231316726, Blast_Score=184, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017178 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 75626; Mature: 75626
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQYRRRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTV CCCHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC PTERDAENLRSIRDQLRSDGIDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQKFS CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHCCC AETYTDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNHGSLSDRIVSRYGNSPEGMVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCHHHHH AALEFARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDG HHHHHHHHHHHCCCHHHHHEECCCCEEEEEEEEHHHEEECCCCEEEEEEEEEECCCCCCC DEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEVPVGFAIVKKYNDLQLIRGENGHVPI CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHEEECCCCEEEEECCCCCCCH KQLIENQGSSFTNELPPFDPFSYQRRISRSFFVGGFAIGGDSMPRVETEAVIPLCRPEEL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCHHHCCCCCCCHHH FHEIMQRLLPEESIDAIRSELVGVRVNTVEDLELLDELLSRLGEAKRFITVSTKDIELFF HHHHHHHHCCHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH RLLDKVEKVRLDITEGEMLDRNIFDRLTNDRLASVEFCFLHETSGAGVPAEVLGLLAQKA HHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH GLQGLERIFFSILSAHSVFVYRRLVQFFSKRGFDYPLVIRFRQMDSVKLDCLISCAVQTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCC SLFSDGIGDVLALQTGLDVAAEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAA CCHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHH SIKLRLSHLKGLKVGIMGCVVNGPGEMADADFGYVGSGKGRISLYVGKECVEENLPESAA HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEECHHHHHHCCCCHHH VDRLVGLIQEKGKWVNP HHHHHHHHHHCCCCCCC >Mature Secondary Structure MFQYRRRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTV CCCHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC PTERDAENLRSIRDQLRSDGIDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQKFS CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHCCC AETYTDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNHGSLSDRIVSRYGNSPEGMVE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCHHHHH AALEFARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDG HHHHHHHHHHHCCCHHHHHEECCCCEEEEEEEEHHHEEECCCCEEEEEEEEEECCCCCCC DEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEVPVGFAIVKKYNDLQLIRGENGHVPI CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHEEECCCCEEEEECCCCCCCH KQLIENQGSSFTNELPPFDPFSYQRRISRSFFVGGFAIGGDSMPRVETEAVIPLCRPEEL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCHHHCCCCCCCHHH FHEIMQRLLPEESIDAIRSELVGVRVNTVEDLELLDELLSRLGEAKRFITVSTKDIELFF HHHHHHHHCCHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH RLLDKVEKVRLDITEGEMLDRNIFDRLTNDRLASVEFCFLHETSGAGVPAEVLGLLAQKA HHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH GLQGLERIFFSILSAHSVFVYRRLVQFFSKRGFDYPLVIRFRQMDSVKLDCLISCAVQTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCC SLFSDGIGDVLALQTGLDVAAEITLAFNILQGARIRMSKTEFISCPGCGRTYFDLEKAAA CCHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHH SIKLRLSHLKGLKVGIMGCVVNGPGEMADADFGYVGSGKGRISLYVGKECVEENLPESAA HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCEEECCCCEEEEEECHHHHHHCCCCHHH VDRLVGLIQEKGKWVNP HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]