| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356039
Identifier: 119356039
GI number: 119356039
Start: 216448
End: 217989
Strand: Reverse
Name: 119356039
Synonym: Cpha266_0192
Alternate gene names: NA
Gene position: 217989-216448 (Counterclockwise)
Preceding gene: 119356041
Following gene: 119356038
Centisome position: 6.96
GC content: 44.62
Gene sequence:
>1542_bases ATGATAGCAGATAAAGTTCAAACGCTCTACCCAAGGGTATCCGAGTATTTTGGTAAAATCAGAAATGGAAACAGATATCT GGAGCATATTCTGGAGGTGGATAGCTTTTGGAAAAATTTCGAGCACTCCCCATGCCGCAAGGTTGTCCTTCAGGGAAGCG AAATGCCTGCAGATGCATGTGTTTCCGACGAATATGATCTGGTTTATGCCGGGGGCTCATTGGGATTGTTGCATGCGTCG GTCATGGCTTCGAAATACGCAAGAAAAGTACTTGTTTTTGACCGCCATATGAGCGGAAAACCAAGCCGTGACTGGAATAT TTCCTGGAATGAACTTGAAAAGCTTGAACAAGTCGGTCTTTTCTCATATGAAGAGATCAACGCGAGTATTGCTTGCAGGT ATAAAACAGGGTGGGCTGAGTTTTACGTGGAAAATGGTCGGAAAAAGCGGCTGTATATCGATAATGTGCTTGACTGTGCT GTTGAGAGCGACCAACTTCTTTCCATTGCCAGACAGAAAATTCTTGCTGATGAATGCAACAGGATCGTTGACAAGATGAC TTTCATGCGGTGTTTTCAGTTTCCTGAGAGTGTGGTGATAGAGGTTGAGAACAATATGCATGAGCGGGTTTATTTCAGAG CCAAGGTATTTGTTGATGCGATGGGAGTACATTCTCCGGTTGCCATGCAGTTGAATGACGGGGCATCCTTTACACATCTC TGTCCTACAGTCGGGACTGTTTCCAGCGGCCTTGAAAATGTTGATCCAGATATAGGCGAAATTCTTGTAAGTACTGAGCC GGCCGATACCAGCTCAGGAAGAGGACGTCAACTAATATGGGAGGGCTTTCCTGCCGGTGGCGATCGCTATACCACCTATC TTTTCTTTTATGATTCCCGGAGCTCCGATAATGATAAATCTCTGCTTGGTCTCTTTGAAACATATTTCCTGAAATTACCT TCCTATAAAAAACCAGGAAAGGATTTTGTCGTCCATCGCCCTGTGTATGGCGTTATACCGGCTTATTATCATGATGGGTT TGAGCGTACCCGTCAAGTTGCCGATAATAATATCCTGATGCTTGGAGATGCCGCTGCACTTGGTTCACCACTTACTTTTT GCGGTTTTGGTTCATTTGTTCGCAATCTCAAATCATTGACAGAGGGGCTCGAAAAAGCCTTGGCCTGTAACAGCTTTGAA AAGAAGAATCTCGAACAGATAAGCGCCTACGAACCAAATGTTGCCGCAATGGCGAACCTTATGAAATTTATGTGTTATAA TAAGTATACAGATCATCCGAATTTTGTCAACGAACTGATGAATGAAGTGATGATAGTTCTGGACGGCCTGCCGCCCAGGT ACAGGGAAGCAATGTTCAAGGATACCCTGGAGCTATCCGATCTGCTTCTCATTGGTTTGAACGTAGCATGGAAATATCCC GGTGTCTTGATGGCGACAGCAACCAAACTCGGTCTGGAGGGATCACTTGGGATGATGAAAAATATGATCGGCTGGGCAAT GTCATCAAAAGCTTCAAATTAA
Upstream 100 bases:
>100_bases GGGCGGCGGGTTCCAGGGGCTTACCGTTTGGAACATGGTTCTTAGGGTTGTTATTTTATATGTATAGTCGGCATCATCAT AAGCAATAACGTCATTTGTA
Downstream 100 bases:
>100_bases AATATTTATCCATCATAAACAGGTTCTGACATGGCAAACGAATCACGAAAAGGCGGTTTTTTTTCCGTATTCAGAAAAGA GGAGAAATCCGTAGCAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MIADKVQTLYPRVSEYFGKIRNGNRYLEHILEVDSFWKNFEHSPCRKVVLQGSEMPADACVSDEYDLVYAGGSLGLLHAS VMASKYARKVLVFDRHMSGKPSRDWNISWNELEKLEQVGLFSYEEINASIACRYKTGWAEFYVENGRKKRLYIDNVLDCA VESDQLLSIARQKILADECNRIVDKMTFMRCFQFPESVVIEVENNMHERVYFRAKVFVDAMGVHSPVAMQLNDGASFTHL CPTVGTVSSGLENVDPDIGEILVSTEPADTSSGRGRQLIWEGFPAGGDRYTTYLFFYDSRSSDNDKSLLGLFETYFLKLP SYKKPGKDFVVHRPVYGVIPAYYHDGFERTRQVADNNILMLGDAAALGSPLTFCGFGSFVRNLKSLTEGLEKALACNSFE KKNLEQISAYEPNVAAMANLMKFMCYNKYTDHPNFVNELMNEVMIVLDGLPPRYREAMFKDTLELSDLLLIGLNVAWKYP GVLMATATKLGLEGSLGMMKNMIGWAMSSKASN
Sequences:
>Translated_513_residues MIADKVQTLYPRVSEYFGKIRNGNRYLEHILEVDSFWKNFEHSPCRKVVLQGSEMPADACVSDEYDLVYAGGSLGLLHAS VMASKYARKVLVFDRHMSGKPSRDWNISWNELEKLEQVGLFSYEEINASIACRYKTGWAEFYVENGRKKRLYIDNVLDCA VESDQLLSIARQKILADECNRIVDKMTFMRCFQFPESVVIEVENNMHERVYFRAKVFVDAMGVHSPVAMQLNDGASFTHL CPTVGTVSSGLENVDPDIGEILVSTEPADTSSGRGRQLIWEGFPAGGDRYTTYLFFYDSRSSDNDKSLLGLFETYFLKLP SYKKPGKDFVVHRPVYGVIPAYYHDGFERTRQVADNNILMLGDAAALGSPLTFCGFGSFVRNLKSLTEGLEKALACNSFE KKNLEQISAYEPNVAAMANLMKFMCYNKYTDHPNFVNELMNEVMIVLDGLPPRYREAMFKDTLELSDLLLIGLNVAWKYP GVLMATATKLGLEGSLGMMKNMIGWAMSSKASN >Mature_513_residues MIADKVQTLYPRVSEYFGKIRNGNRYLEHILEVDSFWKNFEHSPCRKVVLQGSEMPADACVSDEYDLVYAGGSLGLLHAS VMASKYARKVLVFDRHMSGKPSRDWNISWNELEKLEQVGLFSYEEINASIACRYKTGWAEFYVENGRKKRLYIDNVLDCA VESDQLLSIARQKILADECNRIVDKMTFMRCFQFPESVVIEVENNMHERVYFRAKVFVDAMGVHSPVAMQLNDGASFTHL CPTVGTVSSGLENVDPDIGEILVSTEPADTSSGRGRQLIWEGFPAGGDRYTTYLFFYDSRSSDNDKSLLGLFETYFLKLP SYKKPGKDFVVHRPVYGVIPAYYHDGFERTRQVADNNILMLGDAAALGSPLTFCGFGSFVRNLKSLTEGLEKALACNSFE KKNLEQISAYEPNVAAMANLMKFMCYNKYTDHPNFVNELMNEVMIVLDGLPPRYREAMFKDTLELSDLLLIGLNVAWKYP GVLMATATKLGLEGSLGMMKNMIGWAMSSKASN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57890; Mature: 57890
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIADKVQTLYPRVSEYFGKIRNGNRYLEHILEVDSFWKNFEHSPCRKVVLQGSEMPADAC CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHH VSDEYDLVYAGGSLGLLHASVMASKYARKVLVFDRHMSGKPSRDWNISWNELEKLEQVGL CCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHCC FSYEEINASIACRYKTGWAEFYVENGRKKRLYIDNVLDCAVESDQLLSIARQKILADECN CCHHHCCCEEEEEEECCHHHHHEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIVDKMTFMRCFQFPESVVIEVENNMHERVYFRAKVFVDAMGVHSPVAMQLNDGASFTHL HHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEHHHHHHHHHCCCCCEEEEECCCCCHHHH CPTVGTVSSGLENVDPDIGEILVSTEPADTSSGRGRQLIWEGFPAGGDRYTTYLFFYDSR CCCHHHHHHCHHHCCCCHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECC SSDNDKSLLGLFETYFLKLPSYKKPGKDFVVHRPVYGVIPAYYHDGFERTRQVADNNILM CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LGDAAALGSPLTFCGFGSFVRNLKSLTEGLEKALACNSFEKKNLEQISAYEPNVAAMANL EECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCHHHHHHH MKFMCYNKYTDHPNFVNELMNEVMIVLDGLPPRYREAMFKDTLELSDLLLIGLNVAWKYP HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC GVLMATATKLGLEGSLGMMKNMIGWAMSSKASN CEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIADKVQTLYPRVSEYFGKIRNGNRYLEHILEVDSFWKNFEHSPCRKVVLQGSEMPADAC CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHH VSDEYDLVYAGGSLGLLHASVMASKYARKVLVFDRHMSGKPSRDWNISWNELEKLEQVGL CCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHCC FSYEEINASIACRYKTGWAEFYVENGRKKRLYIDNVLDCAVESDQLLSIARQKILADECN CCHHHCCCEEEEEEECCHHHHHEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIVDKMTFMRCFQFPESVVIEVENNMHERVYFRAKVFVDAMGVHSPVAMQLNDGASFTHL HHHHHHHHHHHHHCCCCEEEEECCCCCHHHEEHHHHHHHHHCCCCCEEEEECCCCCHHHH CPTVGTVSSGLENVDPDIGEILVSTEPADTSSGRGRQLIWEGFPAGGDRYTTYLFFYDSR CCCHHHHHHCHHHCCCCHHHEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECC SSDNDKSLLGLFETYFLKLPSYKKPGKDFVVHRPVYGVIPAYYHDGFERTRQVADNNILM CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEE LGDAAALGSPLTFCGFGSFVRNLKSLTEGLEKALACNSFEKKNLEQISAYEPNVAAMANL EECHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCCCHHHHHHH MKFMCYNKYTDHPNFVNELMNEVMIVLDGLPPRYREAMFKDTLELSDLLLIGLNVAWKYP HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC GVLMATATKLGLEGSLGMMKNMIGWAMSSKASN CEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA