| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356038
Identifier: 119356038
GI number: 119356038
Start: 216052
End: 216417
Strand: Reverse
Name: 119356038
Synonym: Cpha266_0191
Alternate gene names: NA
Gene position: 216417-216052 (Counterclockwise)
Preceding gene: 119356039
Following gene: 119356037
Centisome position: 6.91
GC content: 45.9
Gene sequence:
>366_bases ATGGCAAACGAATCACGAAAAGGCGGTTTTTTTTCCGTATTCAGAAAAGAGGAGAAATCCGTAGCAAACAAATCGGCTAT TACATCGCAACAATCAGAAACAAAGGCAGCTTCTTCTGAAAAGCCGGCAGTATCGGTTTCCCGTGAGATGACGCCGAAGC CCGTAGCAAACGTAAAGCCAGCAGCCACTGCGGAACAACAGGAAAAACCTGTTGTTTTCGAGGCGATCGATACGACAGCG GCTTTTAGTGCTTGCTGGAAGGCTTTTGGTGACCTGGGCTTATCGCAGATAAAAACCGTTGATATGGTGCTGACTATGCT GTCAAATTCCATTGCTAAAATTACCGATGGGCAGCAAACGAAATAA
Upstream 100 bases:
>100_bases TCTGGAGGGATCACTTGGGATGATGAAAAATATGATCGGCTGGGCAATGTCATCAAAAGCTTCAAATTAAAATATTTATC CATCATAAACAGGTTCTGAC
Downstream 100 bases:
>100_bases GTGGATGTTTTTTTTAAAACCGATTAAAAGGGAAAGAAATGCCGCAACTACCACAGAATATTATACCGGAGGAATTGACG AAGCCTGCAGCGGCAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MANESRKGGFFSVFRKEEKSVANKSAITSQQSETKAASSEKPAVSVSREMTPKPVANVKPAATAEQQEKPVVFEAIDTTA AFSACWKAFGDLGLSQIKTVDMVLTMLSNSIAKITDGQQTK
Sequences:
>Translated_121_residues MANESRKGGFFSVFRKEEKSVANKSAITSQQSETKAASSEKPAVSVSREMTPKPVANVKPAATAEQQEKPVVFEAIDTTA AFSACWKAFGDLGLSQIKTVDMVLTMLSNSIAKITDGQQTK >Mature_120_residues ANESRKGGFFSVFRKEEKSVANKSAITSQQSETKAASSEKPAVSVSREMTPKPVANVKPAATAEQQEKPVVFEAIDTTAA FSACWKAFGDLGLSQIKTVDMVLTMLSNSIAKITDGQQTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12974; Mature: 12843
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANESRKGGFFSVFRKEEKSVANKSAITSQQSETKAASSEKPAVSVSREMTPKPVANVKP CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCC AATAEQQEKPVVFEAIDTTAAFSACWKAFGDLGLSQIKTVDMVLTMLSNSIAKITDGQQT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC K C >Mature Secondary Structure ANESRKGGFFSVFRKEEKSVANKSAITSQQSETKAASSEKPAVSVSREMTPKPVANVKP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCC AATAEQQEKPVVFEAIDTTAAFSACWKAFGDLGLSQIKTVDMVLTMLSNSIAKITDGQQT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA