| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is mutL
Identifier: 119356019
GI number: 119356019
Start: 194046
End: 195920
Strand: Reverse
Name: mutL
Synonym: Cpha266_0172
Alternate gene names: 119356019
Gene position: 195920-194046 (Counterclockwise)
Preceding gene: 119356021
Following gene: 119356017
Centisome position: 6.25
GC content: 49.97
Gene sequence:
>1875_bases ATGGCAAAAATCGCGCGATTACCGGACAATGTCGCCAACAAAATTTCGGCTGGCGAGGTAGTGCAACGTCCGGCATCAGT CATCAAGGAACTTCTCGAAAACGCCATTGATGCCTGCGCGTCAAAAATAACCGTGACCATCAAGGATGCCGGCAAAGAAC TGGTGCAGATAGTTGACAACGGAATCGGTATGAGTCGCCAGGATGCGCTGCTCTCGGTTGAACGCTTTGCAACAAGCAAG ATTTCAGGCGTTGAAGACCTCGACTCGCTCATGAGCCTTGGATTCAGAGGCGAAGCGCTGCCAAGCATCGCTTCGGTTTC ACAGTTCGAACTGAAAACCAAGCCGGAAGGCGCCCTGCTCGGCTTCAGGTTTCGCTGCGACGGAGGAGAACCGGTTGAAG AATCCGAAGTCAATGCCGAAAAGGGAACAACCATCACAGTAAGAAATCTCTTTTACAACGTTCCGGCACGCAGAAAATTC CTCAAATCAAACGCAACAGAGTTCCGTCATATTTTCGAGTCAGTCAAGTCGCTGGCACTTGCCTATCCGGAAATCGAATG GAAAATGGTCAGCGATGACGAAGAACTCTTCCACTTCAGAACTCCCGACATTTACGAACGCCTCGATGCTTTTTATGGTG AAAATTTCTCCCTGAGCCTCATACCTGTTTCTGAAGAGAACGATTACCTGTCGATAAGCGGCTTTCTGGGAAAACCGGGC ATGCAGAAACGGCAGAAACTCGATCAGTATATCTATGTTAACCGGAGAATTATTCAAAACAGGATGCTCTCACAAGCCTT GCAGCAAGCCTATGGCGAACTGCTCGTCGAGCGTCAGGCTCCGTTTGCCCTGCTCTTTCTCGGCATTGACCCCTCACGTA TTGATGTTAACGTACACCCGGCAAAACTTGAAGTCAAATTCGAAGATGAGCGAAGTGTACGGACCATGTTTTATCCTGTT ATCAAGCGGACCATCCAGCTTCACGACTTTTCACCTGATGCCGCTGAAAAAGAACCCTGTTCGATCAAGGAAGGCACTCT TGATTGTTCATCAAGAAAACTCGGGTTTCAGGACATCGCGGAACCTGCATCGACAACCAGCACACTCTATGCAAACTATC GGCAGGGGGCTTTCGGCGATACACCCTTCGAACGACCTGCCTACGCGGAAAAAGAGCCCCGCCCGTCATCCATCAATACA GGCTTTGAGCGTTTTGAACCAGATCTGCGCGAAGGAGGCGACCTGTTTTCGACAACACTCCAGGCAAGACCTTACGAGGA CGACAACACTCCTGATCCGGGAGAAAACGACCCCAAAATCTGGCAACTGCACAACAAATACATTATCTGCCAGATCAAGA CAGGAATGATGATTATCGACCAGCACGTAGCCCATGAGCGAGTGCTCTACGAACGAGCCGTTGATGTCATGAACCAGAAC GTACCAAACTCTCAGCAACTGCTCTTCCCCCAGAAAATCGAACTCCGTGCCTGGGAATATGAAGTGTTCGAAGAAATTCG GGACGACCTCTATCGGCTTGGATTCAACCTCCGCTCATTCGGCGCAAAAACAGTGATGATCGAAGGAATTCCTCAGGATG TCAGACCCGGAACCGAAGTCACCATCCTGCAGGACATGATTACCGAGTTTCAGGAAAACAGCTCAAAGCTGAAACTCGAA AGAAGAGAAAACCTTGCAAGATCCTACTCCTGCCGCAATGCCATTATGGCCGGTCAGAAACTATCGCTTGAAGAGATGCG CTCGTTGATTGACAACCTCTTCGCCACACGGGTACCCTATACCTGTCCGCACGGCAGACCTGTTATCATAAAGCTCTCGC TCGACCAGCTCGACAGGATGTTCGGGCGAAAATAA
Upstream 100 bases:
>100_bases ATTTTATCGTAAAAGATCTCTATTTATCGATAACTTGTTTTTAGTTTGGCAGACGAGCAAAAACTTCCTATAACTGACCG TATCGTTCCAACAGTTTTCT
Downstream 100 bases:
>100_bases CTGCGGAGTTGTATCTTTTCAGAAAAGTACTAAATTTAGGCCATACCCTTGTAGCTCAGTGGATAGAGCAACAGTTTCCT AAACTGTGGGTCGGCAGTTC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MAKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDNGIGMSRQDALLSVERFATSK ISGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALLGFRFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKF LKSNATEFRHIFESVKSLALAYPEIEWKMVSDDEELFHFRTPDIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGKPG MQKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNVHPAKLEVKFEDERSVRTMFYPV IKRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQDIAEPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINT GFERFEPDLREGGDLFSTTLQARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMNQN VPNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGTEVTILQDMITEFQENSSKLKLE RRENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATRVPYTCPHGRPVIIKLSLDQLDRMFGRK
Sequences:
>Translated_624_residues MAKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDNGIGMSRQDALLSVERFATSK ISGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALLGFRFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKF LKSNATEFRHIFESVKSLALAYPEIEWKMVSDDEELFHFRTPDIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGKPG MQKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNVHPAKLEVKFEDERSVRTMFYPV IKRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQDIAEPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINT GFERFEPDLREGGDLFSTTLQARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMNQN VPNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGTEVTILQDMITEFQENSSKLKLE RRENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATRVPYTCPHGRPVIIKLSLDQLDRMFGRK >Mature_623_residues AKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDNGIGMSRQDALLSVERFATSKI SGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALLGFRFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKFL KSNATEFRHIFESVKSLALAYPEIEWKMVSDDEELFHFRTPDIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGKPGM QKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNVHPAKLEVKFEDERSVRTMFYPVI KRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQDIAEPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINTG FERFEPDLREGGDLFSTTLQARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMNQNV PNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGTEVTILQDMITEFQENSSKLKLER RENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATRVPYTCPHGRPVIIKLSLDQLDRMFGRK
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=316, Percent_Identity=35.4430379746835, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI4505913, Length=330, Percent_Identity=26.969696969697, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI310128478, Length=330, Percent_Identity=26.969696969697, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI189458898, Length=325, Percent_Identity=26.7692307692308, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI4505911, Length=327, Percent_Identity=26.2996941896024, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI189458896, Length=314, Percent_Identity=25.4777070063694, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI91992162, Length=262, Percent_Identity=30.5343511450382, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI91992160, Length=262, Percent_Identity=30.5343511450382, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI310128480, Length=296, Percent_Identity=25.6756756756757, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI263191589, Length=222, Percent_Identity=29.2792792792793, Blast_Score=96, Evalue=1e-19, Organism=Escherichia coli, GI1790612, Length=611, Percent_Identity=30.7692307692308, Blast_Score=236, Evalue=4e-63, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=31.9875776397516, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17562796, Length=347, Percent_Identity=28.8184438040346, Blast_Score=135, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6323819, Length=313, Percent_Identity=31.9488817891374, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324247, Length=352, Percent_Identity=26.4204545454545, Blast_Score=120, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6323063, Length=153, Percent_Identity=28.1045751633987, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17136968, Length=309, Percent_Identity=33.9805825242718, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI17136970, Length=360, Percent_Identity=23.6111111111111, Blast_Score=102, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_CHLPD (A1BCW2)
Other databases:
- EMBL: CP000492 - RefSeq: YP_910663.1 - ProteinModelPortal: A1BCW2 - SMR: A1BCW2 - STRING: A1BCW2 - GeneID: 4568469 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_0172 - NMPDR: fig|290317.7.peg.183 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FLFINNR - ProtClustDB: CLSK638049 - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 70994; Mature: 70862
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDN CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHC GIGMSRQDALLSVERFATSKISGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCEE GFRFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKFLKSNATEFRHIFESVKSLAL EEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH AYPEIEWKMVSDDEELFHFRTPDIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGKPG HCCCCEEEEECCCHHHEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCC MQKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNVHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC AKLEVKFEDERSVRTMFYPVIKRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQDIA EEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC EPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINTGFERFEPDLREGGDLFSTTL CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHHHH QARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMNQN CCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHCC VPNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGTEV CCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCC TILQDMITEFQENSSKLKLERRENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATRVPY HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC TCPHGRPVIIKLSLDQLDRMFGRK CCCCCCEEEEEECHHHHHHHHCCC >Mature Secondary Structure AKIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDN CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHC GIGMSRQDALLSVERFATSKISGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCEE GFRFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKFLKSNATEFRHIFESVKSLAL EEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH AYPEIEWKMVSDDEELFHFRTPDIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGKPG HCCCCEEEEECCCHHHEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCC MQKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNVHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC AKLEVKFEDERSVRTMFYPVIKRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQDIA EEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC EPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINTGFERFEPDLREGGDLFSTTL CCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHHHH QARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMNQN CCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHCC VPNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGTEV CCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCC TILQDMITEFQENSSKLKLERRENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATRVPY HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC TCPHGRPVIIKLSLDQLDRMFGRK CCCCCCEEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA