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The map label for this gene is ydfG [C]

Identifier: 119356006

GI number: 119356006

Start: 176617

End: 177366

Strand: Direct

Name: ydfG [C]

Synonym: Cpha266_0157

Alternate gene names: 119356006

Gene position: 176617-177366 (Clockwise)

Preceding gene: 119356004

Following gene: 119356007

Centisome position: 5.64

GC content: 51.73

Gene sequence:

>750_bases
ATGAAACGGGTAATCATCATTGGTGCGACGAGCGGCATTGGCAGAGCGCTTGCATCGCTTTACATCGCTGAAGGGTGGAC
GACCGGGCTTTGCGGCAGGCGAACGGCGTTTCTCGAAGATCTGCGATCTGTTGCCGGCAAGCAAGTTCTGGTAAGGGCGA
TGGATGTTACTGATACCGTGGCTGCCCGCAAGGTGTTCGTGGAGCTTGTTCAGGTGATGGGCGGCGTTGATCTGGTTATT
ATTTCTGCTGGTACTGGCTATCTTGATCCGTCTTTTCCATGGGAAAAGGAGCTTGAAACGCTGAAGACAAACGTTACCGG
TTTTGCGGCAATTGCACATGCGGCTTTCGAGGTTTTCCGTCATCAGGGTTTCGGGCATCTTGCGGGTATTTCATCCATAG
CTGCGATCAGAGGGGGATCCGTTCCTGCCTATCATGCATCGAAAGCGTTTGTTTCGAATTATCTGCAGGGTGTCCGCTGT
CTTGCTGCGGCAAGCGGTCTTCAGATCCATGTAACGGATATTCTTCCGGGCTTTGTGGATACGGCAATGGCAAAGGGTGA
TGGTCTGTTCTGGGTTGCTTCACCGGAAAAAGCGGCTCTCCAGATTTTCAGGGCGATCAGCAAAAAGAAATACCGGGTCT
GTATAACGAAGCGTTGGCAGATCATCGCAATACTGTTACGGGTGATGCCCAGCGGAGTTTATAACGGCCTTCTATGCAGG
AAAAAGGGAAAAGTTGACAGGGGGATGTGA

Upstream 100 bases:

>100_bases
TGAGCGGAGCCCTTTTTGTGGTTGAGCTGTTTTTACCACTGATCCTGCATCGGAATTCGCATATTTTCCTGATTGCTTCT
GTGAACCTATTTTTTATAAC

Downstream 100 bases:

>100_bases
ACCGGAATAACGGCGAGCCTGGGGATGTAGTTCCGTAAATCAAAACATCTCTCTAAAAGATAATGATAGAATATTTTGAG
AGTACATGGATGAGCACATA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKRVIIIGATSGIGRALASLYIAEGWTTGLCGRRTAFLEDLRSVAGKQVLVRAMDVTDTVAARKVFVELVQVMGGVDLVI
ISAGTGYLDPSFPWEKELETLKTNVTGFAAIAHAAFEVFRHQGFGHLAGISSIAAIRGGSVPAYHASKAFVSNYLQGVRC
LAAASGLQIHVTDILPGFVDTAMAKGDGLFWVASPEKAALQIFRAISKKKYRVCITKRWQIIAILLRVMPSGVYNGLLCR
KKGKVDRGM

Sequences:

>Translated_249_residues
MKRVIIIGATSGIGRALASLYIAEGWTTGLCGRRTAFLEDLRSVAGKQVLVRAMDVTDTVAARKVFVELVQVMGGVDLVI
ISAGTGYLDPSFPWEKELETLKTNVTGFAAIAHAAFEVFRHQGFGHLAGISSIAAIRGGSVPAYHASKAFVSNYLQGVRC
LAAASGLQIHVTDILPGFVDTAMAKGDGLFWVASPEKAALQIFRAISKKKYRVCITKRWQIIAILLRVMPSGVYNGLLCR
KKGKVDRGM
>Mature_249_residues
MKRVIIIGATSGIGRALASLYIAEGWTTGLCGRRTAFLEDLRSVAGKQVLVRAMDVTDTVAARKVFVELVQVMGGVDLVI
ISAGTGYLDPSFPWEKELETLKTNVTGFAAIAHAAFEVFRHQGFGHLAGISSIAAIRGGSVPAYHASKAFVSNYLQGVRC
LAAASGLQIHVTDILPGFVDTAMAKGDGLFWVASPEKAALQIFRAISKKKYRVCITKRWQIIAILLRVMPSGVYNGLLCR
KKGKVDRGM

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=270, Percent_Identity=28.1481481481481, Blast_Score=82, Evalue=4e-16,
Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=27.5675675675676, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26798; Mature: 26798

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVIIIGATSGIGRALASLYIAEGWTTGLCGRRTAFLEDLRSVAGKQVLVRAMDVTDTV
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARKVFVELVQVMGGVDLVIISAGTGYLDPSFPWEKELETLKTNVTGFAAIAHAAFEVFR
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
HQGFGHLAGISSIAAIRGGSVPAYHASKAFVSNYLQGVRCLAAASGLQIHVTDILPGFVD
HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCHHHH
TAMAKGDGLFWVASPEKAALQIFRAISKKKYRVCITKRWQIIAILLRVMPSGVYNGLLCR
HHHHCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHHHCEEEC
KKGKVDRGM
CCCCCCCCC
>Mature Secondary Structure
MKRVIIIGATSGIGRALASLYIAEGWTTGLCGRRTAFLEDLRSVAGKQVLVRAMDVTDTV
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARKVFVELVQVMGGVDLVIISAGTGYLDPSFPWEKELETLKTNVTGFAAIAHAAFEVFR
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
HQGFGHLAGISSIAAIRGGSVPAYHASKAFVSNYLQGVRCLAAASGLQIHVTDILPGFVD
HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCHHHH
TAMAKGDGLFWVASPEKAALQIFRAISKKKYRVCITKRWQIIAILLRVMPSGVYNGLLCR
HHHHCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCHHHHCEEEC
KKGKVDRGM
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]