Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356007

Identifier: 119356007

GI number: 119356007

Start: 178891

End: 181584

Strand: Direct

Name: 119356007

Synonym: Cpha266_0160

Alternate gene names: NA

Gene position: 178891-181584 (Clockwise)

Preceding gene: 119356006

Following gene: 119356011

Centisome position: 5.71

GC content: 49.11

Gene sequence:

>2694_bases
ATGACTACCACTCGATTGAGGCGGCAATACCAATATTTCGCATTCATCAGTTACAGCCACACTGATGCAAAGGTTGCGGA
ATGGCTTCATCGAAAGCTTGAGTCCTATAGGCTTCCCAATGCTGTACTCAGGAAATCTGACGGGCAACTTCCCAGGCATG
TTCGTCCGATATTCAGGGATATAGCAGATTTATCATCAGGTTCATTGGCCAGGACATTGAGAGAAGAGATTGGCCAGTCG
CAGTTTCTTATTGTCATATGCTCGCCTGACAGCGCGAAATCGGAATGGGTCGAAATGGAAGTGAGCCATTTTCTGACCCT
TCGTGGCCATGAGTTTGTGATTCCGGTGATCATCAAGGGAACCCCTTACGCCAAGGATGCAGTAGACGAATGTCTGCCGC
TATCATTGTTGCGCACTGAAGTCGATCTCCTCGGTATTTCGTTTGCCGGACAATCGAAAGAGCAAGTGCTCCTCAAAACG
GTCTCGGCTTTGCTGGATATCAAGTACGACTCGCTTTATGATCGGCACCGCCGGCGACAGCGCCGACAAAGAATGTTTGC
TGCAACTGTCGTAACCGTTATGTTTGTCGTCGTGCTAACGGCTTCTCTATTCAGTTTTATACAATGGAATCGGGCGGAGC
AGCGTCGCGCCGAGGCAGAGCAGCTCCTCAATTATTTGCTTTTGGACCTTCACCCTAAACTGAAGCAATTTGGACGTCTG
GATATCCTGGAGAGCGTCGCGGAGAAATCACGCGAGTACATTGATTATATTTCCACGGATGTCAGGGATCCCATTGACGC
TATTCAGGCGATTTCGTTACGCAGAAACATGGCTGAAGTGTATCAGAGTGTCGGCAAGCTCGAGAACGCTGAAGCTTTGC
ACCTGAAGAATATTTCTGTGCTAAAGAAATTGGAACAGATTGATCCAAAGATGGAGATTATCCATCTCCTCAAAGGAGAA
GAGCATCAGGCTTTGGCCAGTATCCGAAAAACGGAGGGTCGATTTCAGGATGCATTGCATGAGAGTCTGACCGCGTTCTC
TGTATTCAAGTCGTTCGTTTCGGTGAAGAGCGATGCCCGATGGCGATCTGCAAAGGCCAGCAGCGAACAGCGTCTTTCCG
ATGCCTATTACGATCTCGGGATGGGCAAGCAGGCTGCCTGGCACATAAATTCAGCAGTTTCGGATTTCAGGCGGATTCTT
CATGAGCATTCAGCAGGCGATAACTCGTATAAAGCAGATCTTGCGTATGCGTTGGTCAGCAAATCCAGAGTCGAGGTGAA
GTGGGGCACCACTTCTCGCGCTTATTCCGTGTTTGTCGAGGCTTCGGAGCTATTTCGGCAGCATCTTGAAGAACATCCTG
AAGACCGGGAAGTCAGGGCCTCCTTTGCAAACGTGGTCAGCGATCTGGCTGCTATGCTGAAAGATATGGGAAGGCTTGAA
GATGCTTTGATTTACTGGGATCTGGCGATCGATGCAGAGCGCGAGCTTGTGACCTTTGAACCGCTTAATGTCCGGTGGCA
TGCAGATTTGTCAGAGACGATGATGAACAAAGCAAATGCATTGGGACGATTGGGACGAACAGGTGAAGGGTTTCTTCTCT
ACGAAGAAGTCAGCAGGCACCAACGGAAGCTGATAGCCCTTCAGCCAAAGGTTGCCAGATGGCGGGCGACTTACGCATGG
TGCCGTCACAATATGGCGATCGAATACGCTCGTCTCGGAAAGAACAAGGGTGCAATAGATTTGTGGAATGACGCGATTGC
AACGATTGAGCAACTCCGTAAAGATGGTCGGGCAAAGCGTGAATGGCTGCTTGACCTCTGCAATATGCTCGATCAACGAG
CGACGATTACAGCAGAAAACGGTAATTTTGAAAAAGCGGAACAAGATATCAAGGCATCACAAGCTATCAGGGCTTCGTTG
ATATCCGATTCCAATTCGAGTCCTGATGAGCTTTCGCAGATGGGTCTTAACCAAGCCAGAAAGGCGTTACTGGATTACTA
TCGCAAGGACTACTCGCACGCCATGGTCTCGATAAAGGCAGCCGAAGGATACTTGCGCCGCGCGGTCAAGCTTGATGAGG
CTAATTGCGAATGGCGTGCGCATCTTGCAGGGACCCTCAGAAATTCGAGCGTGATCCACCGTGCAGCCGGTTTCCCTGAC
AAGGCAAAGAGGGCTATTGACGAATGCATCGTAATTTTAGAAAAGCTGAGAATTCGACAACCCTCCGACAAGAAAATACG
GGTTGATCTTTCTCAAGCTTATAACAATCAGGGAAACCTGTATAACGATTTCGGCAGCATTAAATCTTCGGTTTCGGCGT
GGGAAAAGTCGCTGACACTTGATTCCGATCCGGCTCAGAGAGAATTCCTTGCCACTCGTTTGGGTACCTTGGCCTATCAA
TACATTCTTCTGCAGGATCCGGGCAAGTCTGAAATGTCTGCGCGTAAGGCGCTTGAAGTGGATGCTGCTCCATGGATACA
AATCAACCTTGGACATGCGCTATTTCTTCAGGACATGCGCGAGGCTGCAAAAGCTCAGTATCTCAATGCTATGCGTAAGG
ATGGAAAGATTCTTGCGTCGATCAGCGCCGATTTTGTTGATATGGAGAATCATGGAATACACGTTCGAAACGCGATTCAG
ATGCTCGATGAGTTGAGAGGCGCTGCCTTGGAGACAAATAACGAAAAACAGTGA

Upstream 100 bases:

>100_bases
TCATCACACGTTATAGCGGTGCCCTTTGGATGAGTTGTTCGGAAAAAAACGTGATATTGCAAGAGTTTCAGGATTTTGAA
CAGCGAACGGGAGCTTTTCC

Downstream 100 bases:

>100_bases
AAACGAAACAGGAGCATCGGAGCAAGAGAAAAATCTGTTGGTAAATCTTTCATACTGAATAAACAGATCTGTTCTATAGG
CCAAACGCCGGATTTTATTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: WD Repeat-Containing Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 897; Mature: 896

Protein sequence:

>897_residues
MTTTRLRRQYQYFAFISYSHTDAKVAEWLHRKLESYRLPNAVLRKSDGQLPRHVRPIFRDIADLSSGSLARTLREEIGQS
QFLIVICSPDSAKSEWVEMEVSHFLTLRGHEFVIPVIIKGTPYAKDAVDECLPLSLLRTEVDLLGISFAGQSKEQVLLKT
VSALLDIKYDSLYDRHRRRQRRQRMFAATVVTVMFVVVLTASLFSFIQWNRAEQRRAEAEQLLNYLLLDLHPKLKQFGRL
DILESVAEKSREYIDYISTDVRDPIDAIQAISLRRNMAEVYQSVGKLENAEALHLKNISVLKKLEQIDPKMEIIHLLKGE
EHQALASIRKTEGRFQDALHESLTAFSVFKSFVSVKSDARWRSAKASSEQRLSDAYYDLGMGKQAAWHINSAVSDFRRIL
HEHSAGDNSYKADLAYALVSKSRVEVKWGTTSRAYSVFVEASELFRQHLEEHPEDREVRASFANVVSDLAAMLKDMGRLE
DALIYWDLAIDAERELVTFEPLNVRWHADLSETMMNKANALGRLGRTGEGFLLYEEVSRHQRKLIALQPKVARWRATYAW
CRHNMAIEYARLGKNKGAIDLWNDAIATIEQLRKDGRAKREWLLDLCNMLDQRATITAENGNFEKAEQDIKASQAIRASL
ISDSNSSPDELSQMGLNQARKALLDYYRKDYSHAMVSIKAAEGYLRRAVKLDEANCEWRAHLAGTLRNSSVIHRAAGFPD
KAKRAIDECIVILEKLRIRQPSDKKIRVDLSQAYNNQGNLYNDFGSIKSSVSAWEKSLTLDSDPAQREFLATRLGTLAYQ
YILLQDPGKSEMSARKALEVDAAPWIQINLGHALFLQDMREAAKAQYLNAMRKDGKILASISADFVDMENHGIHVRNAIQ
MLDELRGAALETNNEKQ

Sequences:

>Translated_897_residues
MTTTRLRRQYQYFAFISYSHTDAKVAEWLHRKLESYRLPNAVLRKSDGQLPRHVRPIFRDIADLSSGSLARTLREEIGQS
QFLIVICSPDSAKSEWVEMEVSHFLTLRGHEFVIPVIIKGTPYAKDAVDECLPLSLLRTEVDLLGISFAGQSKEQVLLKT
VSALLDIKYDSLYDRHRRRQRRQRMFAATVVTVMFVVVLTASLFSFIQWNRAEQRRAEAEQLLNYLLLDLHPKLKQFGRL
DILESVAEKSREYIDYISTDVRDPIDAIQAISLRRNMAEVYQSVGKLENAEALHLKNISVLKKLEQIDPKMEIIHLLKGE
EHQALASIRKTEGRFQDALHESLTAFSVFKSFVSVKSDARWRSAKASSEQRLSDAYYDLGMGKQAAWHINSAVSDFRRIL
HEHSAGDNSYKADLAYALVSKSRVEVKWGTTSRAYSVFVEASELFRQHLEEHPEDREVRASFANVVSDLAAMLKDMGRLE
DALIYWDLAIDAERELVTFEPLNVRWHADLSETMMNKANALGRLGRTGEGFLLYEEVSRHQRKLIALQPKVARWRATYAW
CRHNMAIEYARLGKNKGAIDLWNDAIATIEQLRKDGRAKREWLLDLCNMLDQRATITAENGNFEKAEQDIKASQAIRASL
ISDSNSSPDELSQMGLNQARKALLDYYRKDYSHAMVSIKAAEGYLRRAVKLDEANCEWRAHLAGTLRNSSVIHRAAGFPD
KAKRAIDECIVILEKLRIRQPSDKKIRVDLSQAYNNQGNLYNDFGSIKSSVSAWEKSLTLDSDPAQREFLATRLGTLAYQ
YILLQDPGKSEMSARKALEVDAAPWIQINLGHALFLQDMREAAKAQYLNAMRKDGKILASISADFVDMENHGIHVRNAIQ
MLDELRGAALETNNEKQ
>Mature_896_residues
TTTRLRRQYQYFAFISYSHTDAKVAEWLHRKLESYRLPNAVLRKSDGQLPRHVRPIFRDIADLSSGSLARTLREEIGQSQ
FLIVICSPDSAKSEWVEMEVSHFLTLRGHEFVIPVIIKGTPYAKDAVDECLPLSLLRTEVDLLGISFAGQSKEQVLLKTV
SALLDIKYDSLYDRHRRRQRRQRMFAATVVTVMFVVVLTASLFSFIQWNRAEQRRAEAEQLLNYLLLDLHPKLKQFGRLD
ILESVAEKSREYIDYISTDVRDPIDAIQAISLRRNMAEVYQSVGKLENAEALHLKNISVLKKLEQIDPKMEIIHLLKGEE
HQALASIRKTEGRFQDALHESLTAFSVFKSFVSVKSDARWRSAKASSEQRLSDAYYDLGMGKQAAWHINSAVSDFRRILH
EHSAGDNSYKADLAYALVSKSRVEVKWGTTSRAYSVFVEASELFRQHLEEHPEDREVRASFANVVSDLAAMLKDMGRLED
ALIYWDLAIDAERELVTFEPLNVRWHADLSETMMNKANALGRLGRTGEGFLLYEEVSRHQRKLIALQPKVARWRATYAWC
RHNMAIEYARLGKNKGAIDLWNDAIATIEQLRKDGRAKREWLLDLCNMLDQRATITAENGNFEKAEQDIKASQAIRASLI
SDSNSSPDELSQMGLNQARKALLDYYRKDYSHAMVSIKAAEGYLRRAVKLDEANCEWRAHLAGTLRNSSVIHRAAGFPDK
AKRAIDECIVILEKLRIRQPSDKKIRVDLSQAYNNQGNLYNDFGSIKSSVSAWEKSLTLDSDPAQREFLATRLGTLAYQY
ILLQDPGKSEMSARKALEVDAAPWIQINLGHALFLQDMREAAKAQYLNAMRKDGKILASISADFVDMENHGIHVRNAIQM
LDELRGAALETNNEKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102339; Mature: 102208

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50104 TIR ; PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRLRRQYQYFAFISYSHTDAKVAEWLHRKLESYRLPNAVLRKSDGQLPRHVRPIFRD
CCCHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHH
IADLSSGSLARTLREEIGQSQFLIVICSPDSAKSEWVEMEVSHFLTLRGHEFVIPVIIKG
HHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCEEEEEEEECC
TPYAKDAVDECLPLSLLRTEVDLLGISFAGQSKEQVLLKTVSALLDIKYDSLYDRHRRRQ
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RRQRMFAATVVTVMFVVVLTASLFSFIQWNRAEQRRAEAEQLLNYLLLDLHPKLKQFGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
DILESVAEKSREYIDYISTDVRDPIDAIQAISLRRNMAEVYQSVGKLENAEALHLKNISV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHH
LKKLEQIDPKMEIIHLLKGEEHQALASIRKTEGRFQDALHESLTAFSVFKSFVSVKSDAR
HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WRSAKASSEQRLSDAYYDLGMGKQAAWHINSAVSDFRRILHEHSAGDNSYKADLAYALVS
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KSRVEVKWGTTSRAYSVFVEASELFRQHLEEHPEDREVRASFANVVSDLAAMLKDMGRLE
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DALIYWDLAIDAERELVTFEPLNVRWHADLSETMMNKANALGRLGRTGEGFLLYEEVSRH
HHEEEEEEEECCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
QRKLIALQPKVARWRATYAWCRHNMAIEYARLGKNKGAIDLWNDAIATIEQLRKDGRAKR
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHH
EWLLDLCNMLDQRATITAENGNFEKAEQDIKASQAIRASLISDSNSSPDELSQMGLNQAR
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
KALLDYYRKDYSHAMVSIKAAEGYLRRAVKLDEANCEWRAHLAGTLRNSSVIHRAAGFPD
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCH
KAKRAIDECIVILEKLRIRQPSDKKIRVDLSQAYNNQGNLYNDFGSIKSSVSAWEKSLTL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCC
DSDPAQREFLATRLGTLAYQYILLQDPGKSEMSARKALEVDAAPWIQINLGHALFLQDMR
CCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
EAAKAQYLNAMRKDGKILASISADFVDMENHGIHVRNAIQMLDELRGAALETNNEKQ
HHHHHHHHHHHHHCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
TTTRLRRQYQYFAFISYSHTDAKVAEWLHRKLESYRLPNAVLRKSDGQLPRHVRPIFRD
CCHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHH
IADLSSGSLARTLREEIGQSQFLIVICSPDSAKSEWVEMEVSHFLTLRGHEFVIPVIIKG
HHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCEEEEEEEECC
TPYAKDAVDECLPLSLLRTEVDLLGISFAGQSKEQVLLKTVSALLDIKYDSLYDRHRRRQ
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RRQRMFAATVVTVMFVVVLTASLFSFIQWNRAEQRRAEAEQLLNYLLLDLHPKLKQFGRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHH
DILESVAEKSREYIDYISTDVRDPIDAIQAISLRRNMAEVYQSVGKLENAEALHLKNISV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHH
LKKLEQIDPKMEIIHLLKGEEHQALASIRKTEGRFQDALHESLTAFSVFKSFVSVKSDAR
HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WRSAKASSEQRLSDAYYDLGMGKQAAWHINSAVSDFRRILHEHSAGDNSYKADLAYALVS
HHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KSRVEVKWGTTSRAYSVFVEASELFRQHLEEHPEDREVRASFANVVSDLAAMLKDMGRLE
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DALIYWDLAIDAERELVTFEPLNVRWHADLSETMMNKANALGRLGRTGEGFLLYEEVSRH
HHEEEEEEEECCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
QRKLIALQPKVARWRATYAWCRHNMAIEYARLGKNKGAIDLWNDAIATIEQLRKDGRAKR
HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHH
EWLLDLCNMLDQRATITAENGNFEKAEQDIKASQAIRASLISDSNSSPDELSQMGLNQAR
HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
KALLDYYRKDYSHAMVSIKAAEGYLRRAVKLDEANCEWRAHLAGTLRNSSVIHRAAGFPD
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCCH
KAKRAIDECIVILEKLRIRQPSDKKIRVDLSQAYNNQGNLYNDFGSIKSSVSAWEKSLTL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCC
DSDPAQREFLATRLGTLAYQYILLQDPGKSEMSARKALEVDAAPWIQINLGHALFLQDMR
CCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
EAAKAQYLNAMRKDGKILASISADFVDMENHGIHVRNAIQMLDELRGAALETNNEKQ
HHHHHHHHHHHHHCCCEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA