Click here to switch to the map view.

The map label for this gene is msrB [H]

Identifier: 119355940

GI number: 119355940

Start: 106136

End: 106678

Strand: Direct

Name: msrB [H]

Synonym: Cpha266_0090

Alternate gene names: 119355940

Gene position: 106136-106678 (Clockwise)

Preceding gene: 119355937

Following gene: 119355947

Centisome position: 3.39

GC content: 56.17

Gene sequence:

>543_bases
ATGCATCGGATGCTTATGTTCATATTTTTTGCGACCGTTGGGCTTTTTGCCTGCAGCGGAGAGCCGACATCGCCGAAATT
TTCACCTTCAAAAGCCATGAGCGACAGTCGCGCATTGAATCCTTACTACTCCCGAACCGATACCACGAAGCTCGATTTGC
CCGATTCCGTCTGGAAAAAGGTACTCCCTCCGGAGGTATATGAGGTGGCGCGCAAGGCAGGTACCGAGCGGGCATTCACC
GGAAAGCTCTGGGATTTCGAGGGTATCGGTACCTATTACTGTGCAGCATGCGGCAATGCGCTGTTCCGTTCGGATGCGAA
GTTCGCCAGTACCTGCGGCTGGCCGAGTTTTTTCGAGACCGTGCGTCCGGGCAGCGTTGAGTACCGTACCGATATGGCGT
TCGGTATGGCGCGTACCGAAGTGCTCTGCGGACGATGCGGCGCGCATCTCGGACACGTGTTCGACGACGGACCGCCGCCG
ACAGGCAAAAGGTTCTGCATGAATTCGATAGTGCTCGATTTCGAGCCGGATGAGGGGGATTAG

Upstream 100 bases:

>100_bases
AAGAGTCGTGTGTTCGGAATGGTTCGAATATGGAATATTTTAATGGCGAAACGGAACCGTGACGGCAGGCAAGGCGTTTC
AATGGAGAACGAGAGCTGAC

Downstream 100 bases:

>100_bases
AAAAGGGCTGTTATTCAGCCCAGTTTTCATAACGAAGTCCGGGAACCCTCATGAACTCGCGGACATTGTTCGTTACCAGA
ACAGTGTCCAGTGCGAGAGC

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHRMLMFIFFATVGLFACSGEPTSPKFSPSKAMSDSRALNPYYSRTDTTKLDLPDSVWKKVLPPEVYEVARKAGTERAFT
GKLWDFEGIGTYYCAACGNALFRSDAKFASTCGWPSFFETVRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSIVLDFEPDEGD

Sequences:

>Translated_180_residues
MHRMLMFIFFATVGLFACSGEPTSPKFSPSKAMSDSRALNPYYSRTDTTKLDLPDSVWKKVLPPEVYEVARKAGTERAFT
GKLWDFEGIGTYYCAACGNALFRSDAKFASTCGWPSFFETVRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSIVLDFEPDEGD
>Mature_180_residues
MHRMLMFIFFATVGLFACSGEPTSPKFSPSKAMSDSRALNPYYSRTDTTKLDLPDSVWKKVLPPEVYEVARKAGTERAFT
GKLWDFEGIGTYYCAACGNALFRSDAKFASTCGWPSFFETVRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPPP
TGKRFCMNSIVLDFEPDEGD

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=127, Percent_Identity=44.8818897637795, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI301336162, Length=127, Percent_Identity=44.8818897637795, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI73089054, Length=127, Percent_Identity=44.8818897637795, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI37620216, Length=127, Percent_Identity=44.8818897637795, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI117606353, Length=136, Percent_Identity=47.0588235294118, Blast_Score=122, Evalue=2e-28,
Organism=Homo sapiens, GI7706511, Length=89, Percent_Identity=43.8202247191011, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1788077, Length=116, Percent_Identity=49.1379310344828, Blast_Score=121, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17553450, Length=129, Percent_Identity=49.6124031007752, Blast_Score=128, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI115532676, Length=129, Percent_Identity=49.6124031007752, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6319816, Length=146, Percent_Identity=36.986301369863, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=46.09375, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=43.7037037037037, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24645799, Length=128, Percent_Identity=42.96875, Blast_Score=114, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45553335, Length=128, Percent_Identity=42.96875, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356369, Length=128, Percent_Identity=42.96875, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24645801, Length=139, Percent_Identity=39.568345323741, Blast_Score=110, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24645804, Length=139, Percent_Identity=39.568345323741, Blast_Score=110, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 19965; Mature: 19965

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRMLMFIFFATVGLFACSGEPTSPKFSPSKAMSDSRALNPYYSRTDTTKLDLPDSVWKK
CHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCCCHHHHHH
VLPPEVYEVARKAGTERAFTGKLWDFEGIGTYYCAACGNALFRSDAKFASTCGWPSFFET
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
VRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPPPTGKRFCMNSIVLDFEPDEGD
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure
MHRMLMFIFFATVGLFACSGEPTSPKFSPSKAMSDSRALNPYYSRTDTTKLDLPDSVWKK
CHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCCCHHHHHH
VLPPEVYEVARKAGTERAFTGKLWDFEGIGTYYCAACGNALFRSDAKFASTCGWPSFFET
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
VRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPPPTGKRFCMNSIVLDFEPDEGD
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA