| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119355911
Identifier: 119355911
GI number: 119355911
Start: 68108
End: 68572
Strand: Direct
Name: 119355911
Synonym: Cpha266_0061
Alternate gene names: NA
Gene position: 68108-68572 (Clockwise)
Preceding gene: 119355910
Following gene: 119355912
Centisome position: 2.17
GC content: 55.05
Gene sequence:
>465_bases ATGAAAAAAACCATCGTTGCAGGTCTGGCTGGAGGTATGGCCATGAATCTCGCTATGTTGCTGACCTTCCGTACCCTCGG ATTCGGCTGGGACGGCAAGGGGATTCTGCTGACCTCGCCCATGCAGAGCCACAAGCTTATCGCGGTATGGACGGAAATCC AGCCGCTGCCGCTTGTCGTGAACACCCCGCTTCCCATCATTCTGGGCCTCATGCTTTTCGGCATTGGCCATGCGTTCATC TACCGTTCAGTCGCAAGCGCCTGGCCGGCAGGGGTGTTGCCGAGGGCCATGAGGATGTCCGGCCTGATTTTCTTCATGAC CTTTCTTTTCTGGGAGTTTTTTACCCCCTTCAATCAGTTTGGCGAGCCGCTGCCGCTCATTGCGCTTGAACTGTCGTTCT GGGTAGTTATTGCAACTGCCGAGGGTATAGCTATTGCATGGGTGATGGAAAGGAGGACAGCATGA
Upstream 100 bases:
>100_bases TCTGTTCGAGCTCGACTCCATCTGCCGTCAGTTTGTCCGATCGCCGGAGTCCGCACCGGATGCAACCGGATTTTCCAGCA ACCATTAACCGGAAAGAATC
Downstream 100 bases:
>100_bases AAGCGCTGATTTTCGACGGATCGCCTGAAGGCGACAGCACGGGCGGAAGGCTTGCGGAGGTTCTGGCTGAACTACTTGCA GCGAAAGGGTATGAAACCGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKKTIVAGLAGGMAMNLAMLLTFRTLGFGWDGKGILLTSPMQSHKLIAVWTEIQPLPLVVNTPLPIILGLMLFGIGHAFI YRSVASAWPAGVLPRAMRMSGLIFFMTFLFWEFFTPFNQFGEPLPLIALELSFWVVIATAEGIAIAWVMERRTA
Sequences:
>Translated_154_residues MKKTIVAGLAGGMAMNLAMLLTFRTLGFGWDGKGILLTSPMQSHKLIAVWTEIQPLPLVVNTPLPIILGLMLFGIGHAFI YRSVASAWPAGVLPRAMRMSGLIFFMTFLFWEFFTPFNQFGEPLPLIALELSFWVVIATAEGIAIAWVMERRTA >Mature_154_residues MKKTIVAGLAGGMAMNLAMLLTFRTLGFGWDGKGILLTSPMQSHKLIAVWTEIQPLPLVVNTPLPIILGLMLFGIGHAFI YRSVASAWPAGVLPRAMRMSGLIFFMTFLFWEFFTPFNQFGEPLPLIALELSFWVVIATAEGIAIAWVMERRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17045; Mature: 17045
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIVAGLAGGMAMNLAMLLTFRTLGFGWDGKGILLTSPMQSHKLIAVWTEIQPLPLVV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEE NTPLPIILGLMLFGIGHAFIYRSVASAWPAGVLPRAMRMSGLIFFMTFLFWEFFTPFNQF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GEPLPLIALELSFWVVIATAEGIAIAWVMERRTA CCCCCCEEHHHEEEEEEEECCCEEEEEEECCCCC >Mature Secondary Structure MKKTIVAGLAGGMAMNLAMLLTFRTLGFGWDGKGILLTSPMQSHKLIAVWTEIQPLPLVV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEE NTPLPIILGLMLFGIGHAFIYRSVASAWPAGVLPRAMRMSGLIFFMTFLFWEFFTPFNQF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GEPLPLIALELSFWVVIATAEGIAIAWVMERRTA CCCCCCEEHHHEEEEEEEECCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA