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The map label for this gene is 119355910

Identifier: 119355910

GI number: 119355910

Start: 67352

End: 68095

Strand: Direct

Name: 119355910

Synonym: Cpha266_0060

Alternate gene names: NA

Gene position: 67352-68095 (Clockwise)

Preceding gene: 119355908

Following gene: 119355911

Centisome position: 2.15

GC content: 56.72

Gene sequence:

>744_bases
ATGACTACTATGGCCAGACCGTTCAAGGCATTGCAGATGCCAAATCTCAGCGAATCCATCAAGGAGGCCGCCTGGCGGCA
GATTAACGAATTTGGAGCATCTTCGCTTTCCCTCCGAAAAATCGCACGGGAGCTCGGCATTACGGCTCCGGCTATCTATA
ACTATTTTCCCGACCGCGACGCTCTGGTGACGGCGCTTATTATCGACGCCTACGCATCGTTTGGAGACTGTCAGCATGAA
GCCGGGCAAGCGCATCCCGGACAAGGCAGGGAGATCGAGCGGCTGAAGGCTACCGGACTTGCATACCGTAAATGGGCGCT
CGTCCATCCGCTTCGCTATCTGCTCATCTTCGGCAATCCGGTTCCCGGCTACGTTCCGCCCATGCAGAAACTGCTGCCTG
TCATGATGCGTTCGCTCGGCACTCTTGTCGGAATCATTGCGGAACTTCATGTTCTCGGGCGCCTCCATATCGAAGGGGTC
CCGTTGCCGATGCTCAAGCCGGGCAATCGTTTTTTCGCTCTCATGGAAACCGCGGACGAAGGCATGCATGCAGTTTATGC
TGTAGCCATGCTTATCTGGAGCCGGGTGCACGGCCTTGTGTCGCTCGAAATAACCGGCCAGCAGCTCCCGTTCGCAGAGG
ACGGAGCGGCGCTTTATCTGTTCGAGCTCGACTCCATCTGCCGTCAGTTTGTCCGATCGCCGGAGTCCGCACCGGATGCA
ACCGGATTTTCCAGCAACCATTAA

Upstream 100 bases:

>100_bases
AAAACAGGCCCCTTGTAAAGCTTCGGCTGGAGGCGGGGAGCCTGATCGTATTTTGTTTTGTTTTCAAATAAACAGTGTAT
ATTTACACTGTAAATAAAAA

Downstream 100 bases:

>100_bases
CCGGAAAGAATCATGAAAAAAACCATCGTTGCAGGTCTGGCTGGAGGTATGGCCATGAATCTCGCTATGTTGCTGACCTT
CCGTACCCTCGGATTCGGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTTMARPFKALQMPNLSESIKEAAWRQINEFGASSLSLRKIARELGITAPAIYNYFPDRDALVTALIIDAYASFGDCQHE
AGQAHPGQGREIERLKATGLAYRKWALVHPLRYLLIFGNPVPGYVPPMQKLLPVMMRSLGTLVGIIAELHVLGRLHIEGV
PLPMLKPGNRFFALMETADEGMHAVYAVAMLIWSRVHGLVSLEITGQQLPFAEDGAALYLFELDSICRQFVRSPESAPDA
TGFSSNH

Sequences:

>Translated_247_residues
MTTMARPFKALQMPNLSESIKEAAWRQINEFGASSLSLRKIARELGITAPAIYNYFPDRDALVTALIIDAYASFGDCQHE
AGQAHPGQGREIERLKATGLAYRKWALVHPLRYLLIFGNPVPGYVPPMQKLLPVMMRSLGTLVGIIAELHVLGRLHIEGV
PLPMLKPGNRFFALMETADEGMHAVYAVAMLIWSRVHGLVSLEITGQQLPFAEDGAALYLFELDSICRQFVRSPESAPDA
TGFSSNH
>Mature_246_residues
TTMARPFKALQMPNLSESIKEAAWRQINEFGASSLSLRKIARELGITAPAIYNYFPDRDALVTALIIDAYASFGDCQHEA
GQAHPGQGREIERLKATGLAYRKWALVHPLRYLLIFGNPVPGYVPPMQKLLPVMMRSLGTLVGIIAELHVLGRLHIEGVP
LPMLKPGNRFFALMETADEGMHAVYAVAMLIWSRVHGLVSLEITGQQLPFAEDGAALYLFELDSICRQFVRSPESAPDAT
GFSSNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27287; Mature: 27156

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMARPFKALQMPNLSESIKEAAWRQINEFGASSLSLRKIARELGITAPAIYNYFPDRD
CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHH
ALVTALIIDAYASFGDCQHEAGQAHPGQGREIERLKATGLAYRKWALVHPLRYLLIFGNP
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
VPGYVPPMQKLLPVMMRSLGTLVGIIAELHVLGRLHIEGVPLPMLKPGNRFFALMETADE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHH
GMHAVYAVAMLIWSRVHGLVSLEITGQQLPFAEDGAALYLFELDSICRQFVRSPESAPDA
HHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
TGFSSNH
CCCCCCC
>Mature Secondary Structure 
TTMARPFKALQMPNLSESIKEAAWRQINEFGASSLSLRKIARELGITAPAIYNYFPDRD
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCCCHH
ALVTALIIDAYASFGDCQHEAGQAHPGQGREIERLKATGLAYRKWALVHPLRYLLIFGNP
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
VPGYVPPMQKLLPVMMRSLGTLVGIIAELHVLGRLHIEGVPLPMLKPGNRFFALMETADE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHH
GMHAVYAVAMLIWSRVHGLVSLEITGQQLPFAEDGAALYLFELDSICRQFVRSPESAPDA
HHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCC
TGFSSNH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]