Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119355909

Identifier: 119355909

GI number: 119355909

Start: 66590

End: 67027

Strand: Reverse

Name: 119355909

Synonym: Cpha266_0059

Alternate gene names: NA

Gene position: 67027-66590 (Counterclockwise)

Preceding gene: 119355918

Following gene: 119355906

Centisome position: 2.14

GC content: 50.68

Gene sequence:

>438_bases
ATGGCTGAAGAGAACAAAAACTTCTGGGGAACGATCCCGGGAATTCTGACCGGTATCGGTACCGTTTTGACTGCCGCAAC
GGGTTTTTATATGGCGATTTCAGGTGGCTCCCCGACAGCAAAACATAAGCCTGAGGCATCAGCGCCGCCCGCCACCGCTG
TCATGCAGGCAACCGTTCAGACGACCCCAGCGAAAGAGGAGGTAACGCCGCATCTGCAGGATATCTTCATTCTTAAGGCA
GTTATTGATGATCCGGACGGATTTACGAACGTTCGAAGCATGAAATCTTCCAGCAGTTCAATTGTCGCAAAGGTTACCCG
GAACGAACAATTCCACACCTACCTTCAGGATGGGAGCTGGTGGCAGGTTAAAACGGCTGATGGAAAAATCGGCTATATGC
ATACAGGTCATATCAGAATCCTCCAGGATCCCAGATAG

Upstream 100 bases:

>100_bases
TATCCGTTTTCATAACCTATTTTAAAACCTTAATCCGTCATTGCTGTTTCAATCTGACAAGCTGCCGGAAATGGTTTTAT
TGAACCTGTACTGAACAAGC

Downstream 100 bases:

>100_bases
GGCCCCGCTATTTTACCTGAAATCCCAGTACGCTTTCGATGGCGGCTGGTAGAGTTTGCGGCGACCCGCAGAAAGCCCTT
TGCCGAGCAGTTGGGAAATA

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKA
VIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR

Sequences:

>Translated_145_residues
MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKA
VIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR
>Mature_144_residues
AEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQTTPAKEEVTPHLQDIFILKAV
IDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSWWQVKTADGKIGYMHTGHIRILQDPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15714; Mature: 15583

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQ
CCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC
TTPAKEEVTPHLQDIFILKAVIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSW
CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCE
WQVKTADGKIGYMHTGHIRILQDPR
EEEEECCCEEEEEECCEEEEEECCC
>Mature Secondary Structure 
AEENKNFWGTIPGILTGIGTVLTAATGFYMAISGGSPTAKHKPEASAPPATAVMQATVQ
CCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC
TTPAKEEVTPHLQDIFILKAVIDDPDGFTNVRSMKSSSSSIVAKVTRNEQFHTYLQDGSW
CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCE
WQVKTADGKIGYMHTGHIRILQDPR
EEEEECCCEEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA