Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119355902

Identifier: 119355902

GI number: 119355902

Start: 54772

End: 55500

Strand: Direct

Name: 119355902

Synonym: Cpha266_0052

Alternate gene names: NA

Gene position: 54772-55500 (Clockwise)

Preceding gene: 119355901

Following gene: 119355907

Centisome position: 1.75

GC content: 47.6

Gene sequence:

>729_bases
ATGAAAATAAACGCAGGATTACTCTTACTCTTTTCGGTGCTTGTCATCTCCGGTTGTTCCGGAAAAACCGATTCCGCTCA
AACGGGATCGGTTTTGGAGGCATCGTCAAGCTCAGTCCCAAAGCGGTATGAGCTGAAGTCGGGCATTGTCTACTACGAGC
CGACGGAGCTTATGGGCTCAAAGTCTGTCGAAACGCTTTATTTTGACGATTATGGCCGCAGGGAGGCCAGAGAAACGATC
TCGGACGCAAACGTCATGGGGATGAAAATGCATTCACACAAGATGCAGATCACGGATGGCGATTATGTTATTTCCTACGA
AATAGAAAACAGCGTCAATGGGAAGGATGAAGCGAGCAAAGAGGCTACCAGAACAGACATGAAAGAGTTCAGGGAGATGG
CCATCATGATGGGACAGACGTTTGATCCTGAAGAGATGAAGAGGAATTTCGACTATCGTGAAGAGGGCGTTGAAGAGGTC
GCCGGCGTAAACGGCACGAAGTATTCCATATCGCTCAATAAGGAAAAACCAGGGGAGCGAGTGTACGGAGTGCTTTATAA
AAAAATATCAGTCAAAAGCACATTTGGCACGATTGTCATAAAGGCGAAGAAGATCGAGGAAAATGTCGCTGTTCCGGCTT
CGAAGTTCGAGGTTCCTGCTGGTTACACCATCAAGGATGTCAATCTTGAAGAGGAGATGCGTAAAGCGTCGCAGTCTGGC
GAGGAGTAA

Upstream 100 bases:

>100_bases
CTGCCGAGCGTTACTCTGAAGATCAATAACAATGCATGCTGGTTTTTAAGACGGTTGCCGGATAATACCTTGTAACGGTT
AAACAAAATTATAATTACGT

Downstream 100 bases:

>100_bases
GAGGTTGCAAGAGCTGAAAGAAAACAGGAAAGGCTGCCCGATTGGGCGGCCTTTCCTGTTTTCGCCAGGGCTGAAAAACA
ACGCGTCAACTCAAGGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKINAGLLLLFSVLVISGCSGKTDSAQTGSVLEASSSSVPKRYELKSGIVYYEPTELMGSKSVETLYFDDYGRREARETI
SDANVMGMKMHSHKMQITDGDYVISYEIENSVNGKDEASKEATRTDMKEFREMAIMMGQTFDPEEMKRNFDYREEGVEEV
AGVNGTKYSISLNKEKPGERVYGVLYKKISVKSTFGTIVIKAKKIEENVAVPASKFEVPAGYTIKDVNLEEEMRKASQSG
EE

Sequences:

>Translated_242_residues
MKINAGLLLLFSVLVISGCSGKTDSAQTGSVLEASSSSVPKRYELKSGIVYYEPTELMGSKSVETLYFDDYGRREARETI
SDANVMGMKMHSHKMQITDGDYVISYEIENSVNGKDEASKEATRTDMKEFREMAIMMGQTFDPEEMKRNFDYREEGVEEV
AGVNGTKYSISLNKEKPGERVYGVLYKKISVKSTFGTIVIKAKKIEENVAVPASKFEVPAGYTIKDVNLEEEMRKASQSG
EE
>Mature_242_residues
MKINAGLLLLFSVLVISGCSGKTDSAQTGSVLEASSSSVPKRYELKSGIVYYEPTELMGSKSVETLYFDDYGRREARETI
SDANVMGMKMHSHKMQITDGDYVISYEIENSVNGKDEASKEATRTDMKEFREMAIMMGQTFDPEEMKRNFDYREEGVEEV
AGVNGTKYSISLNKEKPGERVYGVLYKKISVKSTFGTIVIKAKKIEENVAVPASKFEVPAGYTIKDVNLEEEMRKASQSG
EE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27009; Mature: 27009

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINAGLLLLFSVLVISGCSGKTDSAQTGSVLEASSSSVPKRYELKSGIVYYEPTELMGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEHHHCCEEEECCHHHCCC
KSVETLYFDDYGRREARETISDANVMGMKMHSHKMQITDGDYVISYEIENSVNGKDEASK
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHHH
EATRTDMKEFREMAIMMGQTFDPEEMKRNFDYREEGVEEVAGVNGTKYSISLNKEKPGER
HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHH
VYGVLYKKISVKSTFGTIVIKAKKIEENVAVPASKFEVPAGYTIKDVNLEEEMRKASQSG
HHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCC
EE
CC
>Mature Secondary Structure
MKINAGLLLLFSVLVISGCSGKTDSAQTGSVLEASSSSVPKRYELKSGIVYYEPTELMGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEHHHCCEEEECCHHHCCC
KSVETLYFDDYGRREARETISDANVMGMKMHSHKMQITDGDYVISYEIENSVNGKDEASK
CCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCEEEEECCCEEEEEEECCCCCCCCHHHH
EATRTDMKEFREMAIMMGQTFDPEEMKRNFDYREEGVEEVAGVNGTKYSISLNKEKPGER
HHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHH
VYGVLYKKISVKSTFGTIVIKAKKIEENVAVPASKFEVPAGYTIKDVNLEEEMRKASQSG
HHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA