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The map label for this gene is yraN [C]

Identifier: 119355887

GI number: 119355887

Start: 38787

End: 39170

Strand: Reverse

Name: yraN [C]

Synonym: Cpha266_0037

Alternate gene names: 119355887

Gene position: 39170-38787 (Counterclockwise)

Preceding gene: 119355888

Following gene: 119355886

Centisome position: 1.25

GC content: 47.4

Gene sequence:

>384_bases
ATGAGCTCAGACCCTCACATGCTCGGTATCCAGGGGGAACAAATCGCTGCGGCATACCTGTCGAGGCATGGGTACCGGAT
TATCCAACGCAATTATCGGTACCGACGTAACGAGATCGATATTATCGCAAAAAAACACGCGACGATTTGTTTTATCGAAG
TAAAAACCCGGGCATCTCTTGAAAAAGGGCACCCATCCGAAGCCGTAACGCCGAAAAAGCAGAAAGAGATCATAAAAGCA
GCAAAATCATATCTCTTTTCTCTTGGAACGGATCGCTGCGAGTGCAGATTTGACGTCATTGCCATTCTTGTCAGGAGCAT
GAAGCAGGAAGAGATCGGCCTCTATGACCTTGATCATTTTACCGATGCTTTCCAGGCGGAATAG

Upstream 100 bases:

>100_bases
GACAGCAAGCCACATCAAAGCGATCGAAACATTCGGACGCACTCCTGTTCACCGAAAGAGCTTCCGACTCAAACAACTTG
GAGAAAAATAACCCTTCGCC

Downstream 100 bases:

>100_bases
TCCTCCCGGAAGCAGCAGAATAGCGCTATTTTTGTTATCTTGAAGATTATCTTGTTCACCCAGTTACCTTGTAAAAAGAT
TATGCAGGAAACCGTTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSSDPHMLGIQGEQIAAAYLSRHGYRIIQRNYRYRRNEIDIIAKKHATICFIEVKTRASLEKGHPSEAVTPKKQKEIIKA
AKSYLFSLGTDRCECRFDVIAILVRSMKQEEIGLYDLDHFTDAFQAE

Sequences:

>Translated_127_residues
MSSDPHMLGIQGEQIAAAYLSRHGYRIIQRNYRYRRNEIDIIAKKHATICFIEVKTRASLEKGHPSEAVTPKKQKEIIKA
AKSYLFSLGTDRCECRFDVIAILVRSMKQEEIGLYDLDHFTDAFQAE
>Mature_126_residues
SSDPHMLGIQGEQIAAAYLSRHGYRIIQRNYRYRRNEIDIIAKKHATICFIEVKTRASLEKGHPSEAVTPKKQKEIIKAA
KSYLFSLGTDRCECRFDVIAILVRSMKQEEIGLYDLDHFTDAFQAE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y037_CHLPD (A1BCI0)

Other databases:

- EMBL:   CP000492
- RefSeq:   YP_910531.1
- ProteinModelPortal:   A1BCI0
- STRING:   A1BCI0
- GeneID:   4568925
- GenomeReviews:   CP000492_GR
- KEGG:   cph:Cpha266_0037
- NMPDR:   fig|290317.7.peg.34
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14634; Mature: 14503

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDPHMLGIQGEQIAAAYLSRHGYRIIQRNYRYRRNEIDIIAKKHATICFIEVKTRASL
CCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCC
EKGHPSEAVTPKKQKEIIKAAKSYLFSLGTDRCECRFDVIAILVRSMKQEEIGLYDLDHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHH
TDAFQAE
HHHHCCC
>Mature Secondary Structure 
SSDPHMLGIQGEQIAAAYLSRHGYRIIQRNYRYRRNEIDIIAKKHATICFIEVKTRASL
CCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCC
EKGHPSEAVTPKKQKEIIKAAKSYLFSLGTDRCECRFDVIAILVRSMKQEEIGLYDLDHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHH
TDAFQAE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA