| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is mnmG
Identifier: 118582020
GI number: 118582020
Start: 4001929
End: 4003815
Strand: Reverse
Name: mnmG
Synonym: Ppro_3621
Alternate gene names: 118582020
Gene position: 4003815-4001929 (Counterclockwise)
Preceding gene: 118582021
Following gene: 118582019
Centisome position: 99.9
GC content: 58.24
Gene sequence:
>1887_bases ATGATGACGTACGATTTTGAATACGATGTAATCGTGGTTGGTGCCGGCCATGCCGGCTGCGAGGCTGCCTTGGCAGCGGC GCGCATGGGATGCCGGACACTGCTCTTGACCATAAACCTGGACGCCATAGCGCTCATGTCGTGCAACCCCTCCATCGGTG GCCTGGCAAAGGGGCATCTCGTCAAGGAGATCGACGCACTGGGTGGCGAGATGGCACGGAATATAGACGCCACCGGAATC CAGTTCCGCATTCTCAACACCAGGAAGGGTCCCGCCGTTCGCGCATCTCGGGCCCAGGCCGACAAACAACTGTATCGCCT GCGCATGAAGCGCGTGCTGGAGAATCAGGACAACCTTCATCTGAAACAGGGTGAAGTCACCGCGCTGTACTGCGACGGCT CTGTCGTTCGCGGCGTGGATACCCGCTCCGGCATCCGCTTCCTTGGAAAAACCGTGGTGCTGACGACGGGGACCTTTATG CGCGGTCTGATACATATCGGTCTTACCCACTATGAAGGGGGTCGCGCCGGGGATCTGCCCTCAATCGGGCTGTCCGATCA ACTCAAACAGCTCGGATTGCAGGTGGGCAGGCTTAAGACTGGCACACCGGCCAGGCTTGACGGTCGTACCATAGATTTTT CCCGGCTGGAACCGCAGCATGGCGATAATCCGCCGCAGCCGTTCTCTTTCTCCACCGAGCGCATCACCATGCGTCAGGTT CCTTGCCACATCGCCTACACCAACGAGCGCTCCCACGACATCATCCGTTCCGGACTGGATCGTTCCCCGCTCTATGCCGG GATCATCGAAGGCATCGGGCCGCGCTACTGCCCCTCCATCGAGGACAAGGTGGTCAGGTTTCCGGATAAGGACCGCCACC AGGCATTTATCGAACCGGAAGGGTTGGATACGGTTGAGATGTACCCCAGTGGCATGTCTACTTCCCTGCCCATCGATATC CAGATTGCATTTTACCGCTCCATGGAGGGTCTGGAGCGGGTCGAGATCATGCGACCGGCCTATGGAATCGAGTACGACTA CGTCGATCCGATCCAGTTGCACACCTCTCTGGAGACAAAGGCAATCACCAACCTGTATCATGCCGGCCAGATCAACGGCA CTTCGGGCTACGAGGAGGCTGCCGGTCAGGGGATAGTCGCTGGAATCAACGCTGCCCTGCGCACGCGTGGCGAGGAACCG CTGATCCTTTCCCGCAGCGAATCGTACATCGGTGTCATGATAGACGACCTGATCACCCTGGGGACCAAAGAACCCTACCG CATGTTTACTTCTCGCGCAGAATACCGTCTATTGCTGCGCGAGGACAACGCCGATCAGCGCCTGCGGGAAATCGGGTATC GGGTGGGACTGGTGTCTGATGCGGAATACGAGGGGTATCTGCGCAAACGGGACATGATTCAGGCTGAACGTGAACGCCTG GCTGCCACGCGGATCAGTATGAGTCAGGCGGAAGAGGAATATTTCACGGCCAGGGGATTGCCGGATCTGCAGAAGGGAAC CAGCTACGAACAGCTGCTGCGGCGCCCCGAGATAACCTACGACGATCTGCTCAGTTTCGACACTGTTTCACGTGAAACAC CTTCCGTGGTGCGCGAACAGGTGGAAATCCAGATTAAATATCAGGGGTATATCGAACGGCAACTGGAGCAGATCCGGCGC TCCGCAAAGCTGGAGAACACCCCCCTACCGACGGATATGGATTATGCCGCCATTAACGGCCTGACCACCGAAGTGAAGGA AAAGCTGACCAAAGTTCGTCCCGATACGCTTGGCCAGGCCTCTCGTATTCCTGGGGTCACGCCGGCTGCTGTTTCCGTGC TCTCCATTGCCCTCAAGGCCCATGCCGGAGCCAGGAAACAGGGATGA
Upstream 100 bases:
>100_bases TTCTCGATCTGATCTTTTCTTCCTTCTGTATCGGCAAGTAGGTTGCCACAACCGCAGCATTTAGGGTCATGTTTCACGTG AAACGTCGGAGATGTAATTC
Downstream 100 bases:
>100_bases GTATGAACCGGTTTCGGGAAACGCTGCAAAGGGCAACGGAAGAAATGCAGTTTGAACTCAGCGGAGAACAGCTGCGTGAC TTCCAACTGTTCGCAATGGA
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MMTYDFEYDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHLVKEIDALGGEMARNIDATGI QFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLHLKQGEVTALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFM RGLIHIGLTHYEGGRAGDLPSIGLSDQLKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQV PCHIAYTNERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPEGLDTVEMYPSGMSTSLPIDI QIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETKAITNLYHAGQINGTSGYEEAAGQGIVAGINAALRTRGEEP LILSRSESYIGVMIDDLITLGTKEPYRMFTSRAEYRLLLREDNADQRLREIGYRVGLVSDAEYEGYLRKRDMIQAERERL AATRISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQVEIQIKYQGYIERQLEQIRR SAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQASRIPGVTPAAVSVLSIALKAHAGARKQG
Sequences:
>Translated_628_residues MMTYDFEYDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHLVKEIDALGGEMARNIDATGI QFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLHLKQGEVTALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFM RGLIHIGLTHYEGGRAGDLPSIGLSDQLKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQV PCHIAYTNERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPEGLDTVEMYPSGMSTSLPIDI QIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETKAITNLYHAGQINGTSGYEEAAGQGIVAGINAALRTRGEEP LILSRSESYIGVMIDDLITLGTKEPYRMFTSRAEYRLLLREDNADQRLREIGYRVGLVSDAEYEGYLRKRDMIQAERERL AATRISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQVEIQIKYQGYIERQLEQIRR SAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQASRIPGVTPAAVSVLSIALKAHAGARKQG >Mature_628_residues MMTYDFEYDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHLVKEIDALGGEMARNIDATGI QFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLHLKQGEVTALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFM RGLIHIGLTHYEGGRAGDLPSIGLSDQLKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQV PCHIAYTNERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPEGLDTVEMYPSGMSTSLPIDI QIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETKAITNLYHAGQINGTSGYEEAAGQGIVAGINAALRTRGEEP LILSRSESYIGVMIDDLITLGTKEPYRMFTSRAEYRLLLREDNADQRLREIGYRVGLVSDAEYEGYLRKRDMIQAERERL AATRISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQVEIQIKYQGYIERQLEQIRR SAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQASRIPGVTPAAVSVLSIALKAHAGARKQG
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=628, Percent_Identity=44.2675159235669, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI19882217, Length=653, Percent_Identity=42.572741194487, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI183227703, Length=668, Percent_Identity=41.6167664670659, Blast_Score=479, Evalue=1e-135, Organism=Escherichia coli, GI2367273, Length=627, Percent_Identity=56.2998405103668, Blast_Score=696, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=632, Percent_Identity=40.3481012658228, Blast_Score=456, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321202, Length=619, Percent_Identity=45.2342487883683, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI24658174, Length=643, Percent_Identity=43.3903576982893, Blast_Score=471, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_PELPD (A1AV42)
Other databases:
- EMBL: CP000482 - RefSeq: YP_903270.1 - ProteinModelPortal: A1AV42 - SMR: A1AV42 - STRING: A1AV42 - GeneID: 4574421 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3621 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: A1AV42 - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR013027 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - PRINTS: PR00368 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 69835; Mature: 69835
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 126-126 BINDING 181-181 BINDING 370-370
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTYDFEYDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHL CCEEEEECCEEEEECCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCCCCHHHHH VKEIDALGGEMARNIDATGIQFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLH HHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE LKQGEVTALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFMRGLIHIGLTHYEGGRAGDLP EECCCEEEEEECCCEEECCCCHHHHHHHCCEEEEECCHHHHHHHHHCEEEECCCCCCCCC SIGLSDQLKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCEEEEEEC PCHIAYTNERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPE CEEEEECCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEEECCC GLDTVEMYPSGMSTSLPIDIQIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETK CCCEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHH AITNLYHAGQINGTSGYEEAAGQGIVAGINAALRTRGEEPLILSRSESYIGVMIDDLITL HHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHC GTKEPYRMFTSRAEYRLLLREDNADQRLREIGYRVGLVSDAEYEGYLRKRDMIQAERERL CCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH AATRISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQ HHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHC VEIQIKYQGYIERQLEQIRRSAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQA EEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCH SRIPGVTPAAVSVLSIALKAHAGARKQG HCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMTYDFEYDVIVVGAGHAGCEAALAAARMGCRTLLLTINLDAIALMSCNPSIGGLAKGHL CCEEEEECCEEEEECCCCCHHHHHHHHHHCCEEEEEEEECCEEEEEECCCCCCCCHHHHH VKEIDALGGEMARNIDATGIQFRILNTRKGPAVRASRAQADKQLYRLRMKRVLENQDNLH HHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE LKQGEVTALYCDGSVVRGVDTRSGIRFLGKTVVLTTGTFMRGLIHIGLTHYEGGRAGDLP EECCCEEEEEECCCEEECCCCHHHHHHHCCEEEEECCHHHHHHHHHCEEEECCCCCCCCC SIGLSDQLKQLGLQVGRLKTGTPARLDGRTIDFSRLEPQHGDNPPQPFSFSTERITMRQV CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCCEEEEEEC PCHIAYTNERSHDIIRSGLDRSPLYAGIIEGIGPRYCPSIEDKVVRFPDKDRHQAFIEPE CEEEEECCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEEECCC GLDTVEMYPSGMSTSLPIDIQIAFYRSMEGLERVEIMRPAYGIEYDYVDPIQLHTSLETK CCCEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHH AITNLYHAGQINGTSGYEEAAGQGIVAGINAALRTRGEEPLILSRSESYIGVMIDDLITL HHHHHHHCCCCCCCCCHHHHCCCCEEEHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHC GTKEPYRMFTSRAEYRLLLREDNADQRLREIGYRVGLVSDAEYEGYLRKRDMIQAERERL CCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH AATRISMSQAEEEYFTARGLPDLQKGTSYEQLLRRPEITYDDLLSFDTVSRETPSVVREQ HHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHC VEIQIKYQGYIERQLEQIRRSAKLENTPLPTDMDYAAINGLTTEVKEKLTKVRPDTLGQA EEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCH SRIPGVTPAAVSVLSIALKAHAGARKQG HCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA