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The map label for this gene is arnC [H]

Identifier: 118582015

GI number: 118582015

Start: 3997027

End: 3997965

Strand: Reverse

Name: arnC [H]

Synonym: Ppro_3616

Alternate gene names: 118582015

Gene position: 3997965-3997027 (Counterclockwise)

Preceding gene: 118582016

Following gene: 118582014

Centisome position: 99.75

GC content: 62.73

Gene sequence:

>939_bases
ATGAATCATCCCTATCTGAGCATCGTTGTTGCGGTTCGCGATGATGAATACAATCTGACCCCCTTCATGGAGCGGCTCTA
CCCGGTTTTGCAGGGTATGGGCAAGGCGTTTGAGATCATTTTCTCCGATGACGGTTCCCGCGACCGCTCGGCCCAGATTC
TCCGTGGTATGGCGAAGGAGTATCCCGGTGTCAAGATCATCGAACTTAACGGTAGCTTCGGCGGCCAGACGGCCTTCCTG
GCCGGCTTCGGAAAAGCCAGGGGGGTGGTCGTTGTCACGCTGGCTGCCGATTTGAGCGACCCGCCGGAAGAGATTCCGCG
GCTTGTGGCCGAGATGGAACGGGGGCGCGACCTGGTCGGGATCGTGAGCCAGAAGCGCCAGGACCGCGCTCTCCGTCGGG
TGGCGACGCGGCTGCTCAGCCTGGCCGGCACCGCCCTGACCGGCATGCGCATGAGCGATCCCGGCTGCACGCTGCGGGCC
TACCATCGGGATATCGTAGCCACCATCAACCGCTGCCGGGAGACCACCACCAGTATTCCGGTCCTGGCCTACTCCTTCTG
CTCGAACCCGGCGGAGGTTCGTGGCCTTCACGCCGAACGCGGCAGCGGTGAGGGGAACGTTCCGCTCTCCGCTCTGCTGC
GCGGAACTGGCGACCAGATCACCTCCTGCTCGATCATGCCGCTGCGCCTGTTCACCCGCCTCGGCCTGGCCACCACGTTC
TTCGCTGCCCTGCTCACGCTGCTTCTTTTGATCTGGCGCTTCCTTGTGGGCGCCGGGCTGGAGTGGAGCCTGCTTCTGTT
CGCGATCCTGCTCTTCTTTGCCGGCATCATCATCCTGGGGATCGGAGTCGTGGGCGAATATGTGGGCAAGATCTACCAGG
AAGTGCGCCATCGGCCGCGCTTCGTGATCAGAAGCAGCCATGGTTTCACGGATGACTAG

Upstream 100 bases:

>100_bases
TGCACTGGACGGCATCGCCGGCATGCGCGACTGGCAGAAGGGGCTGTATGGTCAGGAGTTGCTGACTGAACTGTCGGCGG
GCTGATGGCGTGAGCAGCCC

Downstream 100 bases:

>100_bases
GCCCCGCGGCGCGTGGCCGGGGATTTCCCTGATGGAGATCGTGATGGTTCCTGCGGTCATCGCTTTAGAGCGAGGGAGTG
CGTAATGGAATTACGACTGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNHPYLSIVVAVRDDEYNLTPFMERLYPVLQGMGKAFEIIFSDDGSRDRSAQILRGMAKEYPGVKIIELNGSFGGQTAFL
AGFGKARGVVVVTLAADLSDPPEEIPRLVAEMERGRDLVGIVSQKRQDRALRRVATRLLSLAGTALTGMRMSDPGCTLRA
YHRDIVATINRCRETTTSIPVLAYSFCSNPAEVRGLHAERGSGEGNVPLSALLRGTGDQITSCSIMPLRLFTRLGLATTF
FAALLTLLLLIWRFLVGAGLEWSLLLFAILLFFAGIIILGIGVVGEYVGKIYQEVRHRPRFVIRSSHGFTDD

Sequences:

>Translated_312_residues
MNHPYLSIVVAVRDDEYNLTPFMERLYPVLQGMGKAFEIIFSDDGSRDRSAQILRGMAKEYPGVKIIELNGSFGGQTAFL
AGFGKARGVVVVTLAADLSDPPEEIPRLVAEMERGRDLVGIVSQKRQDRALRRVATRLLSLAGTALTGMRMSDPGCTLRA
YHRDIVATINRCRETTTSIPVLAYSFCSNPAEVRGLHAERGSGEGNVPLSALLRGTGDQITSCSIMPLRLFTRLGLATTF
FAALLTLLLLIWRFLVGAGLEWSLLLFAILLFFAGIIILGIGVVGEYVGKIYQEVRHRPRFVIRSSHGFTDD
>Mature_312_residues
MNHPYLSIVVAVRDDEYNLTPFMERLYPVLQGMGKAFEIIFSDDGSRDRSAQILRGMAKEYPGVKIIELNGSFGGQTAFL
AGFGKARGVVVVTLAADLSDPPEEIPRLVAEMERGRDLVGIVSQKRQDRALRRVATRLLSLAGTALTGMRMSDPGCTLRA
YHRDIVATINRCRETTTSIPVLAYSFCSNPAEVRGLHAERGSGEGNVPLSALLRGTGDQITSCSIMPLRLFTRLGLATTF
FAALLTLLLLIWRFLVGAGLEWSLLLFAILLFFAGIIILGIGVVGEYVGKIYQEVRHRPRFVIRSSHGFTDD

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=37.4193548387097, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1788692, Length=303, Percent_Identity=27.3927392739274, Blast_Score=121, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6325441, Length=108, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 34292; Mature: 34292

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPYLSIVVAVRDDEYNLTPFMERLYPVLQGMGKAFEIIFSDDGSRDRSAQILRGMAKE
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
YPGVKIIELNGSFGGQTAFLAGFGKARGVVVVTLAADLSDPPEEIPRLVAEMERGRDLVG
CCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHH
IVSQKRQDRALRRVATRLLSLAGTALTGMRMSDPGCTLRAYHRDIVATINRCRETTTSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCH
VLAYSFCSNPAEVRGLHAERGSGEGNVPLSALLRGTGDQITSCSIMPLRLFTRLGLATTF
HHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FAALLTLLLLIWRFLVGAGLEWSLLLFAILLFFAGIIILGIGVVGEYVGKIYQEVRHRPR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVIRSSHGFTDD
EEEECCCCCCCC
>Mature Secondary Structure
MNHPYLSIVVAVRDDEYNLTPFMERLYPVLQGMGKAFEIIFSDDGSRDRSAQILRGMAKE
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
YPGVKIIELNGSFGGQTAFLAGFGKARGVVVVTLAADLSDPPEEIPRLVAEMERGRDLVG
CCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHH
IVSQKRQDRALRRVATRLLSLAGTALTGMRMSDPGCTLRAYHRDIVATINRCRETTTSIP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCH
VLAYSFCSNPAEVRGLHAERGSGEGNVPLSALLRGTGDQITSCSIMPLRLFTRLGLATTF
HHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FAALLTLLLLIWRFLVGAGLEWSLLLFAILLFFAGIIILGIGVVGEYVGKIYQEVRHRPR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVIRSSHGFTDD
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA