| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is cls [H]
Identifier: 118582006
GI number: 118582006
Start: 3988607
End: 3989812
Strand: Reverse
Name: cls [H]
Synonym: Ppro_3607
Alternate gene names: 118582006
Gene position: 3989812-3988607 (Counterclockwise)
Preceding gene: 118582007
Following gene: 118582005
Centisome position: 99.55
GC content: 63.43
Gene sequence:
>1206_bases ATGGCCATGACGGAAGAGACCTACTTCAGACAGAACAAGCGGCTGGCGCGTCTCATGCGCCGCCTGGAGCGGGCGCGCAC CCCTCCCCCGCCGGTCACCTACCGCCGCAACCGCGTCGCGCTACTGCCGGACGGGGAGAGCTTCTTCCGCGCCTTCCTGA CCGCCATCCGCTCCGCTCGGTACGTCATCCTGCTGGAATACTACCTAATCCGCAACGATCGCACCGGTTCCGTCGTCGTG GCCGAGTTGGCACGGGCCGTCGTGCGCGGTGTGCGGGTCATGCTGATCTACGATTACATCGGCTGCATGGATACCCCTTC GTCCTTCTTCAGGTCCCTTGCCCAGCAGGGAATCGAATTGATCCCCTTCAACGTTCCCTCTTTCCGTCGTGGTATCCGCT GGTTCGACCGCCGCGATCACCGCAAGATGATGGTGATCGATGGCTGCCGGGCTTTCCTGGGCGGCTTCAACATTGGTGAC GAATACGCCGGCATTGCTTCACCGCCGCAACGCTTCCGCGACCTGGGTTTCAGCGTGGAGGGGAGCGCTGTCAGGGAGCT GATCGGCATTTTCAATGAAACATGGCAGATGGAGGTGGGCCAGCTGCCGGAACTTCCGCGGGTCAGAGGGGTGAGCCCGG GCAGCTCCAGTCATGGGGAGGCCAATGTGGCCTTTGTCAGCGGCGGCCCGCATCAGCGCAGCTCCTATATCCGCCATGCT TTTCTGGTCAACATCGCCTCCGCCTCCGAGGATCTGTTGATCGTCAACCCCTATTTCGTGCCCGGCCCGCGCATTATCCG CTCCCTGCTGCGGGCGGTGCGGCGCGGGGTGCGGGTGCGGCTGCTGCTGCCGGCACGCAGCGATGTGCCGCTGGTGCTGC TGGTGGGGCGCAGCTCCTATGGCGCCCTGCTTAAGGGGGGGGTGGAGATTTACGAGCTGGAGGATGGCATTCTGCACGCC AAGGTCATGCTGGTGGATGGAGAACGCACCATCCTGGGGTCGGCCAACCTGGATCAGCGCAGTTTCCACCGCAATTTCGA GATCAACGGCATCATCGACAGCAGTTCCTTCGGCGCCCAGATTCGCCGGGTGGTGGAGCGGGAGGTGGTGGCCTCGCGGC GCGTTACCCTGCATGGGCATGAGCGTCGGGGGCTCGTGACCCGTATGCTGGAAAAGCTGGTCAACCTGTTCGGCTGGTTT CTGTAA
Upstream 100 bases:
>100_bases AGGGTGAGTTTATCGGCTGTAGCGAAATGAGCCCTGGAATGACAGAAAGAGCCCGTCCGCACGAACGCAGGCAGCTCTCA ACTGCCGAATACAGGTTGAT
Downstream 100 bases:
>100_bases AACCATGACTGGTGATCCGTAATTTGTCGCCAATCACAAAGGTTCATGCCCATGAATCCACAGGAGTCGGAAGCGCAAAT CGAGGACGGCATCAGGCTGC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAMTEETYFRQNKRLARLMRRLERARTPPPPVTYRRNRVALLPDGESFFRAFLTAIRSARYVILLEYYLIRNDRTGSVVV AELARAVVRGVRVMLIYDYIGCMDTPSSFFRSLAQQGIELIPFNVPSFRRGIRWFDRRDHRKMMVIDGCRAFLGGFNIGD EYAGIASPPQRFRDLGFSVEGSAVRELIGIFNETWQMEVGQLPELPRVRGVSPGSSSHGEANVAFVSGGPHQRSSYIRHA FLVNIASASEDLLIVNPYFVPGPRIIRSLLRAVRRGVRVRLLLPARSDVPLVLLVGRSSYGALLKGGVEIYELEDGILHA KVMLVDGERTILGSANLDQRSFHRNFEINGIIDSSSFGAQIRRVVEREVVASRRVTLHGHERRGLVTRMLEKLVNLFGWF L
Sequences:
>Translated_401_residues MAMTEETYFRQNKRLARLMRRLERARTPPPPVTYRRNRVALLPDGESFFRAFLTAIRSARYVILLEYYLIRNDRTGSVVV AELARAVVRGVRVMLIYDYIGCMDTPSSFFRSLAQQGIELIPFNVPSFRRGIRWFDRRDHRKMMVIDGCRAFLGGFNIGD EYAGIASPPQRFRDLGFSVEGSAVRELIGIFNETWQMEVGQLPELPRVRGVSPGSSSHGEANVAFVSGGPHQRSSYIRHA FLVNIASASEDLLIVNPYFVPGPRIIRSLLRAVRRGVRVRLLLPARSDVPLVLLVGRSSYGALLKGGVEIYELEDGILHA KVMLVDGERTILGSANLDQRSFHRNFEINGIIDSSSFGAQIRRVVEREVVASRRVTLHGHERRGLVTRMLEKLVNLFGWF L >Mature_400_residues AMTEETYFRQNKRLARLMRRLERARTPPPPVTYRRNRVALLPDGESFFRAFLTAIRSARYVILLEYYLIRNDRTGSVVVA ELARAVVRGVRVMLIYDYIGCMDTPSSFFRSLAQQGIELIPFNVPSFRRGIRWFDRRDHRKMMVIDGCRAFLGGFNIGDE YAGIASPPQRFRDLGFSVEGSAVRELIGIFNETWQMEVGQLPELPRVRGVSPGSSSHGEANVAFVSGGPHQRSSYIRHAF LVNIASASEDLLIVNPYFVPGPRIIRSLLRAVRRGVRVRLLLPARSDVPLVLLVGRSSYGALLKGGVEIYELEDGILHAK VMLVDGERTILGSANLDQRSFHRNFEINGIIDSSSFGAQIRRVVEREVVASRRVTLHGHERRGLVTRMLEKLVNLFGWFL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=374, Percent_Identity=31.8181818181818, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1787007, Length=333, Percent_Identity=31.5315315315315, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI87081826, Length=411, Percent_Identity=27.4939172749392, Blast_Score=95, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR015679 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 45459; Mature: 45328
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMTEETYFRQNKRLARLMRRLERARTPPPPVTYRRNRVALLPDGESFFRAFLTAIRSAR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC YVILLEYYLIRNDRTGSVVVAELARAVVRGVRVMLIYDYIGCMDTPSSFFRSLAQQGIEL EEEEEEEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEE IPFNVPSFRRGIRWFDRRDHRKMMVIDGCRAFLGGFNIGDEYAGIASPPQRFRDLGFSVE EECCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCC GSAVRELIGIFNETWQMEVGQLPELPRVRGVSPGSSSHGEANVAFVSGGPHQRSSYIRHA CHHHHHHHHHHHHCHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH FLVNIASASEDLLIVNPYFVPGPRIIRSLLRAVRRGVRVRLLLPARSDVPLVLLVGRSSY HEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCC GALLKGGVEIYELEDGILHAKVMLVDGERTILGSANLDQRSFHRNFEINGIIDSSSFGAQ CHHHHCCEEEEEECCCEEEEEEEEEECCEEEEECCCCCHHHHHCCCEEEEEECCCHHHHH IRRVVEREVVASRRVTLHGHERRGLVTRMLEKLVNLFGWFL HHHHHHHHHHHHCCEEEECCHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AMTEETYFRQNKRLARLMRRLERARTPPPPVTYRRNRVALLPDGESFFRAFLTAIRSAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCC YVILLEYYLIRNDRTGSVVVAELARAVVRGVRVMLIYDYIGCMDTPSSFFRSLAQQGIEL EEEEEEEEHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEE IPFNVPSFRRGIRWFDRRDHRKMMVIDGCRAFLGGFNIGDEYAGIASPPQRFRDLGFSVE EECCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCC GSAVRELIGIFNETWQMEVGQLPELPRVRGVSPGSSSHGEANVAFVSGGPHQRSSYIRHA CHHHHHHHHHHHHCHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHH FLVNIASASEDLLIVNPYFVPGPRIIRSLLRAVRRGVRVRLLLPARSDVPLVLLVGRSSY HEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCC GALLKGGVEIYELEDGILHAKVMLVDGERTILGSANLDQRSFHRNFEINGIIDSSSFGAQ CHHHHCCEEEEEECCCEEEEEEEEEECCEEEEECCCCCHHHHHCCCEEEEEECCCHHHHH IRRVVEREVVASRRVTLHGHERRGLVTRMLEKLVNLFGWFL HHHHHHHHHHHHCCEEEECCHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA