| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581949
Identifier: 118581949
GI number: 118581949
Start: 3921113
End: 3922060
Strand: Direct
Name: 118581949
Synonym: Ppro_3549
Alternate gene names: NA
Gene position: 3921113-3922060 (Clockwise)
Preceding gene: 118581948
Following gene: 118581950
Centisome position: 97.83
GC content: 62.55
Gene sequence:
>948_bases ATGCAAAAAGACGTTGGAATAGCACCGCGGGCTTGCTATTCTGCTCTGCCAGCCGCAGGCTGTGCGTGTTTTTTTCTGAA AGGAACTCCGTTGCAACGACCGTTTGTGATCTATCATGGAGGCTGTCCCGACGGCTTTGCCGCCGCCTACGCCATATCGC TCCGCTTCCGCCAGGGGACGGAGCATGTCTGCGACCTGCTGCCGGGCGTGTATGGCCAGGAGCCGCCCGACGTGGCGGGA CGTGATCTGTTCATCGTCGACTTTTCCTACCACCGGCCGGTGCTGAAGGATCTCTGCCGTTCGGCCCGCTCCGTGATCAT CATCGACCACCATACCTCTGCCGAACAGGATCTGGCCGGCCTTGAGCTGGAACACGACAACCTGAAGGTGGTCTTCGACA TGAACAGGTCCGGGGCCGTGCTGACCTGGGAGTACTACCATAAAAGCCCGCCCCCGCGACTCTTGCTGCACATCCAGGAC CGGGACCTGTGGCGCTTCGAGCTGGAGGGAACCTGCGACATCTACGCCGCCCTCATGTCACGCCCCTTCGACTTTTCCAT CTGGGAACAACTCTGCACCGGGGAAGAATCATTGAAACCGCTTCTGGAAGAGGGGAAGGCCATCAACCGCTACCGACGGC GAATGATCGACCTGCACCGGGAGAAGGCGGTCATGGCTACCATTGCCGGCTATCGGGTGCCGGTGGTCAACTGCTACGAG GACATCATGAGCGACCTGGTGGGAGAGCTGTCCCACGGCTTTCCCTTCGCCGTCGGCTACCAGGACCAGGGCTCCCTGCG CAAATGGTCGCTGCGCTCCAGTTCCGGCGGCATGGATGTGGCCGCCATCGCCAGCCGCTTCGGCGGCGGCGGGCACCTGC ACGCGGCAGGCTTCACCACCCGTCTGCCGGCCACCCTGCTCTGCGTCCCGGAAGGTGAGTGCGCCTGA
Upstream 100 bases:
>100_bases ATCGCCACCAGGGTGCCCCGCGGCGCCCGGGAGAAGCGCCTGGGCGACAAGAAGATCGTCTCCCTGCGCAAGAGGGAACG CTCCACGTTGGACTGAATGG
Downstream 100 bases:
>100_bases CCTGTCGCCCAAGCGGGGTGACGGGAAAAAGGTGTTGCCGCACCGCGCATAAACGTGCTATAAATCTGGACAATATGTGA ACCACAGGGATCACCCCTGT
Product: DHH superfamily phosphohydrolase
Products: NA
Alternate protein names: DHH Family Phosphohydrolase; DHH Superfamily Phosphohydrolase
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQKDVGIAPRACYSALPAAGCACFFLKGTPLQRPFVIYHGGCPDGFAAAYAISLRFRQGTEHVCDLLPGVYGQEPPDVAG RDLFIVDFSYHRPVLKDLCRSARSVIIIDHHTSAEQDLAGLELEHDNLKVVFDMNRSGAVLTWEYYHKSPPPRLLLHIQD RDLWRFELEGTCDIYAALMSRPFDFSIWEQLCTGEESLKPLLEEGKAINRYRRRMIDLHREKAVMATIAGYRVPVVNCYE DIMSDLVGELSHGFPFAVGYQDQGSLRKWSLRSSSGGMDVAAIASRFGGGGHLHAAGFTTRLPATLLCVPEGECA
Sequences:
>Translated_315_residues MQKDVGIAPRACYSALPAAGCACFFLKGTPLQRPFVIYHGGCPDGFAAAYAISLRFRQGTEHVCDLLPGVYGQEPPDVAG RDLFIVDFSYHRPVLKDLCRSARSVIIIDHHTSAEQDLAGLELEHDNLKVVFDMNRSGAVLTWEYYHKSPPPRLLLHIQD RDLWRFELEGTCDIYAALMSRPFDFSIWEQLCTGEESLKPLLEEGKAINRYRRRMIDLHREKAVMATIAGYRVPVVNCYE DIMSDLVGELSHGFPFAVGYQDQGSLRKWSLRSSSGGMDVAAIASRFGGGGHLHAAGFTTRLPATLLCVPEGECA >Mature_315_residues MQKDVGIAPRACYSALPAAGCACFFLKGTPLQRPFVIYHGGCPDGFAAAYAISLRFRQGTEHVCDLLPGVYGQEPPDVAG RDLFIVDFSYHRPVLKDLCRSARSVIIIDHHTSAEQDLAGLELEHDNLKVVFDMNRSGAVLTWEYYHKSPPPRLLLHIQD RDLWRFELEGTCDIYAALMSRPFDFSIWEQLCTGEESLKPLLEEGKAINRYRRRMIDLHREKAVMATIAGYRVPVVNCYE DIMSDLVGELSHGFPFAVGYQDQGSLRKWSLRSSSGGMDVAAIASRFGGGGHLHAAGFTTRLPATLLCVPEGECA
Specific function: Unknown
COG id: COG2404
COG function: function code R; Predicted phosphohydrolase (DHH superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34996; Mature: 34996
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKDVGIAPRACYSALPAAGCACFFLKGTPLQRPFVIYHGGCPDGFAAAYAISLRFRQGT CCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHEEEEEEEECCCH EHVCDLLPGVYGQEPPDVAGRDLFIVDFSYHRPVLKDLCRSARSVIIIDHHTSAEQDLAG HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCHHCCC LELEHDNLKVVFDMNRSGAVLTWEYYHKSPPPRLLLHIQDRDLWRFELEGTCDIYAALMS CEEECCCEEEEEEECCCCCEEEEEHHCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHC RPFDFSIWEQLCTGEESLKPLLEEGKAINRYRRRMIDLHREKAVMATIAGYRVPVVNCYE CCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DIMSDLVGELSHGFPFAVGYQDQGSLRKWSLRSSSGGMDVAAIASRFGGGGHLHAAGFTT HHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCC RLPATLLCVPEGECA CCCEEEEEECCCCCC >Mature Secondary Structure MQKDVGIAPRACYSALPAAGCACFFLKGTPLQRPFVIYHGGCPDGFAAAYAISLRFRQGT CCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHEEEEEEEECCCH EHVCDLLPGVYGQEPPDVAGRDLFIVDFSYHRPVLKDLCRSARSVIIIDHHTSAEQDLAG HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCHHCCC LELEHDNLKVVFDMNRSGAVLTWEYYHKSPPPRLLLHIQDRDLWRFELEGTCDIYAALMS CEEECCCEEEEEEECCCCCEEEEEHHCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHC RPFDFSIWEQLCTGEESLKPLLEEGKAINRYRRRMIDLHREKAVMATIAGYRVPVVNCYE CCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH DIMSDLVGELSHGFPFAVGYQDQGSLRKWSLRSSSGGMDVAAIASRFGGGGHLHAAGFTT HHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCC RLPATLLCVPEGECA CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA