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The map label for this gene is ykpA [H]

Identifier: 118581950

GI number: 118581950

Start: 3922196

End: 3923833

Strand: Direct

Name: ykpA [H]

Synonym: Ppro_3550

Alternate gene names: 118581950

Gene position: 3922196-3923833 (Clockwise)

Preceding gene: 118581949

Following gene: 118581952

Centisome position: 97.86

GC content: 62.64

Gene sequence:

>1638_bases
ATGATAGCTGCAACAAACGTCACACTTTCCTACGGCAAACGGGTCCTGTTCAAGGACGTCAACATAAAGTTCACGCCGGG
CAACTGCTACGGGCTGATCGGCGCCAACGGCGCGGGCAAGTCCACGTTTCTGAAGATTCTGGCCGGCGAGATCTCTCCCG
ACGCCGGCTCCATCAGCACCGGCCCCCGCGAGCGCATAGCGGTGCTGCGCCAGGACCAGTTCGCCTTTGACGAGGAGACG
GTGCTGAACACGGTCATCAGGGGGCACGAGCGCCTCTACACGATCATGGTCGAGCGGGAGGCGATCTACGCCAAGCCGGA
CTTCAGCGAGGAGGACGGGGTCCGCTCCGCCGAGCTGGAGGGGGAGTTCGCCGAGATGAACGGCTATGAGGCCGAATCCG
AGGCTGCCGTGCTGCTGAACGGCCTGGGTATCCCGGAAGAGCTGCGCGGCCGCCAGATGAAGGAGCTGGAAGCAGGGCAG
AAGGTGCGCGTGCTCCTGGCCCAGGCGCTGTTCGGCAACCCGGACGTGCTGCTTTTGGACGAACCGACCAACAACCTGGA
CCTGAAATCCATCTCCTGGTTGGAGGAATTCCTCTTCCGTTTTTCCAATACGGTCATCGTGGTCTCCCACGACCGCCACT
TCCTGAACCAGGTCTGTACCCATACGGCGGACATCGACTTCGGCAGGATCCAGGTCTACGTGGGCAACTACGATTTCTGG
TACCACGCCAGCCAGCTCAACCTGCGCCAGCGCCAAAACGAGAACCGCAAGGTCAGCGACAAGGTGACCGAGTTGAAGGA
GTTCATCCAGCGCTTCAGCTCCAACGCTTCCAAGGCCAAGCAGGCCACCTCGCGCAAGAAGCTCCTGGACAAGCTGACCC
TGGAGGATATGCCGGTCTCCTCCCGCAAGTACCCGCACGTGGTGTTCAAGCCGGAGCGCGCCTGCGGCGACATCATCCTG
GAAATCCAGGGGCTGTGCAAGCAGGTGGACGGAGTCGACGTGCTGAAAGATCTGGACCTGATCGTGCGCAAGGGGGACAA
GATCGCCTTCGTGGGGGGCAACGGCCTGGCCAGGACGACCCTCTTCCAGATCCTGGCCGGCGAACTGGAGCCGGACAGCG
GCAGCTTCCGCTGGGGGGTGACCATCACCAGCTCCTACTTCCCCAAGGAGAACAGCGCCTACTTCGACAACGATTTCAAC
TTGGTGGAGTGGCTGGGGCAGTTCGCCCCCGCCACCGAGGGGGAGACCTTCGCCCGCGGCTTCCTGGGCAGGATGCTCTT
CTCCGGCGACGAGGCGCTGAAGAAGACCCGCGTCCTCTCCGGCGGCGAGAAGGTGCGCTGCATGCTGTCGCGCATGATGC
TCACCGGCGCCAACGTGCTGATCCTGGACGAACCGACCAACCACCTGGACCTGGAGTCCATCACCGCCCTGAACGACGGC
CTGATCGCCTTCAGCGAGGTCATCCTGTTCGCCTCCCACGACCATGAGTTCGTCTCCACCATCGCCAACCGGATCATCGA
GATCACCCCCCACGGGGTCATCGACCGGGTGATGGGTTTTGACGAGTACCTGGAAGACGCCGATGTGACTGCGGAGCGGG
ACAGCCTGTATGAGGGGCATGCGGAGCTGACGCTGTAG

Upstream 100 bases:

>100_bases
TGCCGCACCGCGCATAAACGTGCTATAAATCTGGACAATATGTGAACCACAGGGATCACCCCTGTGGTTTTTATTTTTTC
GGCAAGGGAGTACGAGCACC

Downstream 100 bases:

>100_bases
GGAAAACTGCTACCTCAGGAAGACGGGACGGGCGCCGATTGCGGCGCCCGTTTTTTTATACGCTGGCACGACCGACGACA
GGCCTGCATCTGTGTGGTAG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MIAATNVTLSYGKRVLFKDVNIKFTPGNCYGLIGANGAGKSTFLKILAGEISPDAGSISTGPRERIAVLRQDQFAFDEET
VLNTVIRGHERLYTIMVEREAIYAKPDFSEEDGVRSAELEGEFAEMNGYEAESEAAVLLNGLGIPEELRGRQMKELEAGQ
KVRVLLAQALFGNPDVLLLDEPTNNLDLKSISWLEEFLFRFSNTVIVVSHDRHFLNQVCTHTADIDFGRIQVYVGNYDFW
YHASQLNLRQRQNENRKVSDKVTELKEFIQRFSSNASKAKQATSRKKLLDKLTLEDMPVSSRKYPHVVFKPERACGDIIL
EIQGLCKQVDGVDVLKDLDLIVRKGDKIAFVGGNGLARTTLFQILAGELEPDSGSFRWGVTITSSYFPKENSAYFDNDFN
LVEWLGQFAPATEGETFARGFLGRMLFSGDEALKKTRVLSGGEKVRCMLSRMMLTGANVLILDEPTNHLDLESITALNDG
LIAFSEVILFASHDHEFVSTIANRIIEITPHGVIDRVMGFDEYLEDADVTAERDSLYEGHAELTL

Sequences:

>Translated_545_residues
MIAATNVTLSYGKRVLFKDVNIKFTPGNCYGLIGANGAGKSTFLKILAGEISPDAGSISTGPRERIAVLRQDQFAFDEET
VLNTVIRGHERLYTIMVEREAIYAKPDFSEEDGVRSAELEGEFAEMNGYEAESEAAVLLNGLGIPEELRGRQMKELEAGQ
KVRVLLAQALFGNPDVLLLDEPTNNLDLKSISWLEEFLFRFSNTVIVVSHDRHFLNQVCTHTADIDFGRIQVYVGNYDFW
YHASQLNLRQRQNENRKVSDKVTELKEFIQRFSSNASKAKQATSRKKLLDKLTLEDMPVSSRKYPHVVFKPERACGDIIL
EIQGLCKQVDGVDVLKDLDLIVRKGDKIAFVGGNGLARTTLFQILAGELEPDSGSFRWGVTITSSYFPKENSAYFDNDFN
LVEWLGQFAPATEGETFARGFLGRMLFSGDEALKKTRVLSGGEKVRCMLSRMMLTGANVLILDEPTNHLDLESITALNDG
LIAFSEVILFASHDHEFVSTIANRIIEITPHGVIDRVMGFDEYLEDADVTAERDSLYEGHAELTL
>Mature_545_residues
MIAATNVTLSYGKRVLFKDVNIKFTPGNCYGLIGANGAGKSTFLKILAGEISPDAGSISTGPRERIAVLRQDQFAFDEET
VLNTVIRGHERLYTIMVEREAIYAKPDFSEEDGVRSAELEGEFAEMNGYEAESEAAVLLNGLGIPEELRGRQMKELEAGQ
KVRVLLAQALFGNPDVLLLDEPTNNLDLKSISWLEEFLFRFSNTVIVVSHDRHFLNQVCTHTADIDFGRIQVYVGNYDFW
YHASQLNLRQRQNENRKVSDKVTELKEFIQRFSSNASKAKQATSRKKLLDKLTLEDMPVSSRKYPHVVFKPERACGDIIL
EIQGLCKQVDGVDVLKDLDLIVRKGDKIAFVGGNGLARTTLFQILAGELEPDSGSFRWGVTITSSYFPKENSAYFDNDFN
LVEWLGQFAPATEGETFARGFLGRMLFSGDEALKKTRVLSGGEKVRCMLSRMMLTGANVLILDEPTNHLDLESITALNDG
LIAFSEVILFASHDHEFVSTIANRIIEITPHGVIDRVMGFDEYLEDADVTAERDSLYEGHAELTL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=32.4528301886792, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI10947137, Length=553, Percent_Identity=30.0180831826401, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI27881506, Length=510, Percent_Identity=31.1764705882353, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI10947135, Length=540, Percent_Identity=27.962962962963, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI69354671, Length=540, Percent_Identity=27.962962962963, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI255708477, Length=221, Percent_Identity=28.9592760180996, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI9961250, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4505771, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI42741659, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI1787041, Length=524, Percent_Identity=47.9007633587786, Blast_Score=529, Evalue=1e-151,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=34.0909090909091, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=29.9813780260708, Blast_Score=234, Evalue=7e-63,
Organism=Escherichia coli, GI1787182, Length=532, Percent_Identity=30.6390977443609, Blast_Score=226, Evalue=4e-60,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=28.5087719298246, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789864, Length=228, Percent_Identity=27.6315789473684, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788450, Length=240, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=29.0909090909091, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994883, Length=243, Percent_Identity=24.2798353909465, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=26.775956284153, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=24.8826291079812, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=25.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788644, Length=231, Percent_Identity=27.7056277056277, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788506, Length=240, Percent_Identity=23.75, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787029, Length=272, Percent_Identity=26.1029411764706, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=29.6650717703349, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=31.7757009345794, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=27.8810408921933, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17559834, Length=541, Percent_Identity=28.6506469500924, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17558664, Length=224, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=220, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17541710, Length=222, Percent_Identity=29.2792792792793, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=214, Percent_Identity=26.6355140186916, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=210, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=522, Percent_Identity=32.3754789272031, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=32.2935779816514, Blast_Score=230, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6325030, Length=236, Percent_Identity=32.2033898305085, Blast_Score=110, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=442, Percent_Identity=24.2081447963801, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=442, Percent_Identity=23.0769230769231, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=31.1320754716981, Blast_Score=251, Evalue=7e-67,
Organism=Drosophila melanogaster, GI24642252, Length=514, Percent_Identity=28.5992217898833, Blast_Score=226, Evalue=5e-59,
Organism=Drosophila melanogaster, GI18859989, Length=514, Percent_Identity=28.5992217898833, Blast_Score=226, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24641342, Length=536, Percent_Identity=28.7313432835821, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24641565, Length=274, Percent_Identity=27.007299270073, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17136662, Length=205, Percent_Identity=28.2926829268293, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60921; Mature: 60921

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAATNVTLSYGKRVLFKDVNIKFTPGNCYGLIGANGAGKSTFLKILAGEISPDAGSIST
CEEEEEEEHHHCCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
GPRERIAVLRQDQFAFDEETVLNTVIRGHERLYTIMVEREAIYAKPDFSEEDGVRSAELE
CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCHHCC
GEFAEMNGYEAESEAAVLLNGLGIPEELRGRQMKELEAGQKVRVLLAQALFGNPDVLLLD
CCHHHCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEE
EPTNNLDLKSISWLEEFLFRFSNTVIVVSHDRHFLNQVCTHTADIDFGRIQVYVGNYDFW
CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCEEEE
YHASQLNLRQRQNENRKVSDKVTELKEFIQRFSSNASKAKQATSRKKLLDKLTLEDMPVS
EEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SRKYPHVVFKPERACGDIILEIQGLCKQVDGVDVLKDLDLIVRKGDKIAFVGGNGLARTT
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHH
LFQILAGELEPDSGSFRWGVTITSSYFPKENSAYFDNDFNLVEWLGQFAPATEGETFARG
HHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
FLGRMLFSGDEALKKTRVLSGGEKVRCMLSRMMLTGANVLILDEPTNHLDLESITALNDG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC
LIAFSEVILFASHDHEFVSTIANRIIEITPHGVIDRVMGFDEYLEDADVTAERDSLYEGH
HHHHHHHHEEECCCHHHHHHHHHHEEEECCCHHHHHHHCHHHHHCCCCCCCCHHHHHCCC
AELTL
CEECC
>Mature Secondary Structure
MIAATNVTLSYGKRVLFKDVNIKFTPGNCYGLIGANGAGKSTFLKILAGEISPDAGSIST
CEEEEEEEHHHCCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
GPRERIAVLRQDQFAFDEETVLNTVIRGHERLYTIMVEREAIYAKPDFSEEDGVRSAELE
CCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCHHCC
GEFAEMNGYEAESEAAVLLNGLGIPEELRGRQMKELEAGQKVRVLLAQALFGNPDVLLLD
CCHHHCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEE
EPTNNLDLKSISWLEEFLFRFSNTVIVVSHDRHFLNQVCTHTADIDFGRIQVYVGNYDFW
CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCEEEE
YHASQLNLRQRQNENRKVSDKVTELKEFIQRFSSNASKAKQATSRKKLLDKLTLEDMPVS
EEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SRKYPHVVFKPERACGDIILEIQGLCKQVDGVDVLKDLDLIVRKGDKIAFVGGNGLARTT
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHH
LFQILAGELEPDSGSFRWGVTITSSYFPKENSAYFDNDFNLVEWLGQFAPATEGETFARG
HHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
FLGRMLFSGDEALKKTRVLSGGEKVRCMLSRMMLTGANVLILDEPTNHLDLESITALNDG
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCC
LIAFSEVILFASHDHEFVSTIANRIIEITPHGVIDRVMGFDEYLEDADVTAERDSLYEGH
HHHHHHHHEEECCCHHHHHHHHHHEEEECCCHHHHHHHCHHHHHCCCCCCCCHHHHHCCC
AELTL
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]