Click here to switch to the map view.

The map label for this gene is panD

Identifier: 118581933

GI number: 118581933

Start: 3904738

End: 3905133

Strand: Reverse

Name: panD

Synonym: Ppro_3533

Alternate gene names: 118581933

Gene position: 3905133-3904738 (Counterclockwise)

Preceding gene: 118581935

Following gene: 118581932

Centisome position: 97.43

GC content: 59.85

Gene sequence:

>396_bases
ATGGAAAGAATCATGCTGAAGAGCAAGATCCACCGCGCAACGATCACCGGAGCTGACCTGGAGTACGAGGGAAGCATCAC
CATCGACCGCGACCTGATGGATGCCGCCGACATCGTTTCCTACGAGAAAGTGGCTGTATGGGATGTCACCAACGGCAGTC
GCCTGGAAACCTATGCCATCGAGGGTGAGCGGGGCTCGGGAGTCATCTGCCTCAACGGAGCCGCCGCGCGGCTGGTTGCA
CCCAAGGACGTCGTCATCATCGCCAGTTTCGTGAACATGAGCAATCAGGCCGCCATCAAGCACGAACCGAAGCTGGTCTT
CGTTGACGGAAAAAACCGCATGCTGCCGACCCGCGCCGAAGAGGCGGGACAGGCCAGGGTGCGCTGCGTACACTGA

Upstream 100 bases:

>100_bases
CTTATTCAATAAATACAGCAGGTTAACCAATTGAAAACGCCCTGGAGATGACGGCTGAATGCGTTAAGCCCGACAGACTC
CTAGGGGAGAATAGGTAGTC

Downstream 100 bases:

>100_bases
TCCAGGCACACAACTCGTATGTAAAGCAGCATCGGGGGATACCGGCATTATTCGGCATTTCCCTTTTTTCTTCCACAGCT
CCCCCGGTCCGAACCGTGAC

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MERIMLKSKIHRATITGADLEYEGSITIDRDLMDAADIVSYEKVAVWDVTNGSRLETYAIEGERGSGVICLNGAAARLVA
PKDVVIIASFVNMSNQAAIKHEPKLVFVDGKNRMLPTRAEEAGQARVRCVH

Sequences:

>Translated_131_residues
MERIMLKSKIHRATITGADLEYEGSITIDRDLMDAADIVSYEKVAVWDVTNGSRLETYAIEGERGSGVICLNGAAARLVA
PKDVVIIASFVNMSNQAAIKHEPKLVFVDGKNRMLPTRAEEAGQARVRCVH
>Mature_131_residues
MERIMLKSKIHRATITGADLEYEGSITIDRDLMDAADIVSYEKVAVWDVTNGSRLETYAIEGERGSGVICLNGAAARLVA
PKDVVIIASFVNMSNQAAIKHEPKLVFVDGKNRMLPTRAEEAGQARVRCVH

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=117, Percent_Identity=49.5726495726496, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_PELPD (A1AUV5)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_903183.1
- ProteinModelPortal:   A1AUV5
- SMR:   A1AUV5
- STRING:   A1AUV5
- GeneID:   4574444
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_3533
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   DHCEEAG
- PhylomeDB:   A1AUV5
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14357; Mature: 14357

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIMLKSKIHRATITGADLEYEGSITIDRDLMDAADIVSYEKVAVWDVTNGSRLETYAI
CCCEEECCCCCEEEEECCCEEECCCEEECCCHHCHHHHCCCCEEEEEECCCCCEEEEEEE
EGERGSGVICLNGAAARLVAPKDVVIIASFVNMSNQAAIKHEPKLVFVDGKNRMLPTRAE
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCC
EAGQARVRCVH
CCCCEEEEEEC
>Mature Secondary Structure
MERIMLKSKIHRATITGADLEYEGSITIDRDLMDAADIVSYEKVAVWDVTNGSRLETYAI
CCCEEECCCCCEEEEECCCEEECCCEEECCCHHCHHHHCCCCEEEEEECCCCCEEEEEEE
EGERGSGVICLNGAAARLVAPKDVVIIASFVNMSNQAAIKHEPKLVFVDGKNRMLPTRAE
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCCCEEEECCCEEEEECCCCCCCCCCCC
EAGQARVRCVH
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA