| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is gcvR [C]
Identifier: 118581914
GI number: 118581914
Start: 3884558
End: 3885118
Strand: Reverse
Name: gcvR [C]
Synonym: Ppro_3514
Alternate gene names: 118581914
Gene position: 3885118-3884558 (Counterclockwise)
Preceding gene: 118581916
Following gene: 118581913
Centisome position: 96.93
GC content: 62.39
Gene sequence:
>561_bases ATGACGCAGCAGCCTGAAACCCTGCATTACGCCGTTTCGGTAGTGGGCAAGGACCGGCCAGGCATTGTGGCCGCCATCGC CGAGGGGCTCTACCACCTGGGGTGCAACATCGCCGATTCCAGTTGCACCATGCTGGCCGGCGAATTCGCCATGATCCTGA TCGTGTCCCACCCCCGCCCCTTCAGCAAGAGCCGTCTCTGCGAGGAACTGAAGCCGGCCTGCGACCGACTGGGCATGTTC CTGGCCGTGAGCCCCCTGACCATGGCCGATGTGCCGACCCGGGAGAACGAACAGGAGATCTGCCTGGTGTCGGTCTACGG AGCGGACCAGCCGGGGATCGTCTTCCGGGTCACACGCGAGCTGGCCTGCCAGGGGATCAATATCACCGATCTGACCACCA AGCTGATCGGGACAAAAGAGCAGCCGGTGTACGTCATGATGCTGGAAGCCGCCCTCCCCGACGGCCAGACCCCGCATCAG CTGGAAAAGCTGCTGGAAAACCTGAAGAAGGAGCTTGATGTGGAGATCGGTGTGCGTATCGTCACCCCGGTTTCCCTCTG A
Upstream 100 bases:
>100_bases GACGAGAGATGGCTCCAGGCCAAATCCCGTTATAAAAAACATTTGCAGATCACGGGGAATGGTGGTAACCGTTCTGTACA TTATTTCTTGGGGAGTTTTC
Downstream 100 bases:
>100_bases TCCATGGCCATTCATCCCATTCTGCGGTATCCCCATCCGCTGCTGAAAAAAATCTGCCACGAGGTTACCGGGATCGACCG GGAGATCCATGCCCTGATTC
Product: amino acid-binding ACT domain-containing protein
Products: NA
Alternate protein names: ACT Domain-Containing Protein; Glycine Cleavage System Regulatory Protein; ACT Domain Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTQQPETLHYAVSVVGKDRPGIVAAIAEGLYHLGCNIADSSCTMLAGEFAMILIVSHPRPFSKSRLCEELKPACDRLGMF LAVSPLTMADVPTRENEQEICLVSVYGADQPGIVFRVTRELACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQ LEKLLENLKKELDVEIGVRIVTPVSL
Sequences:
>Translated_186_residues MTQQPETLHYAVSVVGKDRPGIVAAIAEGLYHLGCNIADSSCTMLAGEFAMILIVSHPRPFSKSRLCEELKPACDRLGMF LAVSPLTMADVPTRENEQEICLVSVYGADQPGIVFRVTRELACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQ LEKLLENLKKELDVEIGVRIVTPVSL >Mature_185_residues TQQPETLHYAVSVVGKDRPGIVAAIAEGLYHLGCNIADSSCTMLAGEFAMILIVSHPRPFSKSRLCEELKPACDRLGMFL AVSPLTMADVPTRENEQEICLVSVYGADQPGIVFRVTRELACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQL EKLLENLKKELDVEIGVRIVTPVSL
Specific function: Negative Transcriptional Regulator Of The Glycine Cleavage System Operon (Gcv). Does Not Autoregulate Its Own Expression. It Is Not Yet Known How Gcvr Acts As A Repressor. It Does Not Seem To Bind DNA. It Could Interact With Gcva And Suppress Its Activat
COG id: COG2716
COG function: function code E; Glycine cleavage system regulatory protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20334; Mature: 20203
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQPETLHYAVSVVGKDRPGIVAAIAEGLYHLGCNIADSSCTMLAGEFAMILIVSHPRP CCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHEEECCEEEEEEEECCCC FSKSRLCEELKPACDRLGMFLAVSPLTMADVPTRENEQEICLVSVYGADQPGIVFRVTRE CCHHHHHHHHHHHHHHCCHHEEECCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEHH LACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQLEKLLENLKKELDVEIGVRI HHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECEEE VTPVSL EEEECC >Mature Secondary Structure TQQPETLHYAVSVVGKDRPGIVAAIAEGLYHLGCNIADSSCTMLAGEFAMILIVSHPRP CCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHEEECCEEEEEEEECCCC FSKSRLCEELKPACDRLGMFLAVSPLTMADVPTRENEQEICLVSVYGADQPGIVFRVTRE CCHHHHHHHHHHHHHHCCHHEEECCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEHH LACQGINITDLTTKLIGTKEQPVYVMMLEAALPDGQTPHQLEKLLENLKKELDVEIGVRI HHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEECEEE VTPVSL EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA