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The map label for this gene is flgH [H]

Identifier: 118581851

GI number: 118581851

Start: 3810742

End: 3811419

Strand: Direct

Name: flgH [H]

Synonym: Ppro_3451

Alternate gene names: 118581851

Gene position: 3810742-3811419 (Clockwise)

Preceding gene: 118581850

Following gene: 118581852

Centisome position: 95.08

GC content: 53.69

Gene sequence:

>678_bases
ATGAAATGTACAGCATCTACAATACTGCTGGCAACTGCGTTGCTCTCGGGATGCGTAACGCAAACCGCCGATGTGAGAAC
AACGACCTTTGACCAGCAGCTTCCACGGCCCCAGGCCGACTACTCAAGAGGTTCCATCTGGCAGGCAAGCTCCGCCGGAC
TGGTGGAGGATCTCAAGGCGCGGCGAAAGGGCGATATCATCACCATCGTGATTACGGAGACGGCCAACGCCTCCAAGGAA
GCCAAGACCGATACCTCGCGAGACACCACGATCAATGCGGGCATCCCCAATTTTCTGGGGCTTGAAAATGCCGGTTTCCT
CAAGAACAATATGGATCTGAGTAAACTGATCAACGCCAATGTCGCTTCCGAGTATGAAGGCTCCGGCTCCACGTCCCGTA
AGGAGACCCTCAATGCCACCATTTCAGCCAAGGTGATCGATGTGCTTCCCAACAGCAATCTGCTAATCGAGGGACGTCGA
AATGTCAAGGTTAACAATGAGGACCAGATCATCATTATCGAGGGCACGGTCAGGCCGTCCGATATCGGCCCTGACAATGT
GGTCAACTCCATCTATATTGCCGACGCCAGGATAAGCTATTCCGGCAAGGGGATCATCTCCGATCGTCAGAGCCCGGGCT
GGCTGATGAATATCGTAGACAAGCTGTGGCCGTTTTAA

Upstream 100 bases:

>100_bases
GAACTGCCGGCCAGGGTTCTGGACAGCACTACTGTACTGATCGTGTTTTAACGTCGTTTGCCGTTTGTTGGATTCAGCTT
TATCCGATGAGGTCGGAACC

Downstream 100 bases:

>100_bases
GAATGGCGCCATCCTTCGCTTGATGGTGGCATACAAGGGTATACAAACATGAAATCATTCATCGCAGCCTGTTGCATGCT
TCTTCTGCTGACAACCGCTG

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKCTASTILLATALLSGCVTQTADVRTTTFDQQLPRPQADYSRGSIWQASSAGLVEDLKARRKGDIITIVITETANASKE
AKTDTSRDTTINAGIPNFLGLENAGFLKNNMDLSKLINANVASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRR
NVKVNNEDQIIIIEGTVRPSDIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLWPF

Sequences:

>Translated_225_residues
MKCTASTILLATALLSGCVTQTADVRTTTFDQQLPRPQADYSRGSIWQASSAGLVEDLKARRKGDIITIVITETANASKE
AKTDTSRDTTINAGIPNFLGLENAGFLKNNMDLSKLINANVASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRR
NVKVNNEDQIIIIEGTVRPSDIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLWPF
>Mature_225_residues
MKCTASTILLATALLSGCVTQTADVRTTTFDQQLPRPQADYSRGSIWQASSAGLVEDLKARRKGDIITIVITETANASKE
AKTDTSRDTTINAGIPNFLGLENAGFLKNNMDLSKLINANVASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRR
NVKVNNEDQIIIIEGTVRPSDIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=237, Percent_Identity=31.6455696202532, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24346; Mature: 24346

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCTASTILLATALLSGCVTQTADVRTTTFDQQLPRPQADYSRGSIWQASSAGLVEDLKA
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
RRKGDIITIVITETANASKEAKTDTSRDTTINAGIPNFLGLENAGFLKNNMDLSKLINAN
HCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCC
VASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRRNVKVNNEDQIIIIEGTVRPS
CCCCCCCCCCCCHHHHHCEEEEEEEEEECCCCCEEEECCCCEEECCCCCEEEEECCCCCC
DIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLWPF
CCCHHHHHCEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKCTASTILLATALLSGCVTQTADVRTTTFDQQLPRPQADYSRGSIWQASSAGLVEDLKA
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
RRKGDIITIVITETANASKEAKTDTSRDTTINAGIPNFLGLENAGFLKNNMDLSKLINAN
HCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHCCC
VASEYEGSGSTSRKETLNATISAKVIDVLPNSNLLIEGRRNVKVNNEDQIIIIEGTVRPS
CCCCCCCCCCCCHHHHHCEEEEEEEEEECCCCCEEEECCCCEEECCCCCEEEEECCCCCC
DIGPDNVVNSIYIADARISYSGKGIISDRQSPGWLMNIVDKLWPF
CCCHHHHHCEEEEEEEEEEECCCEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA