| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581850
Identifier: 118581850
GI number: 118581850
Start: 3809976
End: 3810692
Strand: Direct
Name: 118581850
Synonym: Ppro_3450
Alternate gene names: NA
Gene position: 3809976-3810692 (Clockwise)
Preceding gene: 118581849
Following gene: 118581851
Centisome position: 95.06
GC content: 57.32
Gene sequence:
>717_bases ATGATGCGAAGTACCTTGCTGATCATAATTGCGATGGTGCTGTTGCCTTCTGTGGCAATGGCCGAGCCATCGCGTATTCC TGCAGGCCGTGCGGCGGAAGTCCAGCGGGCGGTGCTGTCCTATGTGCAACAGAGGACAGCCGACATCGGTTGCGAGACCC GTATCAAACGGTTGACCATCTCCGGCAATCCCTCGTTTCCAGCCGGTACGCTGGATTACGAGGTCGTTGCCCCCCAGCAG TGGGAGGGATGGGGAAGGGCGGGCATCAGTGTTGTCGTCCGCAAAGGGACTCGGGTTGTCGGCAATCTTACGGTGTGGGT CGAGGTTGAGGCGCTTGTGGACATGGTGGTGACGGTGCGCCAAATCAATCATGGCAGTGTCATAACCACAGCTGATCTTG CCCTGCGAAAACAGGACATTGCGGCTGTTCAGGGACGCTACCTGGCAAGAACCGAAGATGCGGTTGGGAAAAAGGCGCGC GTAACCTTGAGACCCAATGCCGCGATCAGGAGTGACCAGCTTGAGAAGGTCCCGTTGATCAGAGCGGGCCAACTGGTCAC CATTATTGCGGAAAATGAACGCATGCGCATCACGGCAACCGGCAAGTCCAAAAGTGCAGGCGCCGAGGGAGACACGATCA CTGTCCAGAACCTGGGCTCTCTCAAGGAACTGCCGGCCAGGGTTCTGGACAGCACTACTGTACTGATCGTGTTTTAA
Upstream 100 bases:
>100_bases ATCATAGGCCAGCGTGCCTATGAGGCTAATTCCAAGGCGGTGCAGGCTGCGGACGAGATGCTGCAGACCGCCAACAACCT GAGACGTTAAGCACAGGCAT
Downstream 100 bases:
>100_bases CGTCGTTTGCCGTTTGTTGGATTCAGCTTTATCCGATGAGGTCGGAACCATGAAATGTACAGCATCTACAATACTGCTGG CAACTGCGTTGCTCTCGGGA
Product: SAF domain-containing protein
Products: NA
Alternate protein names: SAF Domain-Containing Protein; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagellar Basal Body P-Ring Formation Protein FlgA; Flageller Protein FlgA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MMRSTLLIIIAMVLLPSVAMAEPSRIPAGRAAEVQRAVLSYVQQRTADIGCETRIKRLTISGNPSFPAGTLDYEVVAPQQ WEGWGRAGISVVVRKGTRVVGNLTVWVEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKAR VTLRPNAAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIVF
Sequences:
>Translated_238_residues MMRSTLLIIIAMVLLPSVAMAEPSRIPAGRAAEVQRAVLSYVQQRTADIGCETRIKRLTISGNPSFPAGTLDYEVVAPQQ WEGWGRAGISVVVRKGTRVVGNLTVWVEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKAR VTLRPNAAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIVF >Mature_238_residues MMRSTLLIIIAMVLLPSVAMAEPSRIPAGRAAEVQRAVLSYVQQRTADIGCETRIKRLTISGNPSFPAGTLDYEVVAPQQ WEGWGRAGISVVVRKGTRVVGNLTVWVEVEALVDMVVTVRQINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKAR VTLRPNAAIRSDQLEKVPLIRAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIVF
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25734; Mature: 25734
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSTLLIIIAMVLLPSVAMAEPSRIPAGRAAEVQRAVLSYVQQRTADIGCETRIKRLTI CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE SGNPSFPAGTLDYEVVAPQQWEGWGRAGISVVVRKGTRVVGNLTVWVEVEALVDMVVTVR ECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHH QINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPNAAIRSDQLEKVPLI HCCCCCEEEEHHHHHHHHHHHHHCCCCEEECHHHCCCEEEEEECCCCCCCCCCHHCCCEE RAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIVF ECCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MMRSTLLIIIAMVLLPSVAMAEPSRIPAGRAAEVQRAVLSYVQQRTADIGCETRIKRLTI CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE SGNPSFPAGTLDYEVVAPQQWEGWGRAGISVVVRKGTRVVGNLTVWVEVEALVDMVVTVR ECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHHHHH QINHGSVITTADLALRKQDIAAVQGRYLARTEDAVGKKARVTLRPNAAIRSDQLEKVPLI HCCCCCEEEEHHHHHHHHHHHHHCCCCEEECHHHCCCEEEEEECCCCCCCCCCHHCCCEE RAGQLVTIIAENERMRITATGKSKSAGAEGDTITVQNLGSLKELPARVLDSTTVLIVF ECCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA