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The map label for this gene is fliN [H]

Identifier: 118581838

GI number: 118581838

Start: 3799245

End: 3799544

Strand: Direct

Name: fliN [H]

Synonym: Ppro_3438

Alternate gene names: 118581838

Gene position: 3799245-3799544 (Clockwise)

Preceding gene: 118581837

Following gene: 118581839

Centisome position: 94.79

GC content: 49.67

Gene sequence:

>300_bases
GTGAGTGATAAGCCTGAATCAAACGAGACGGAAATAGACAGAAAGAACCTCGACTTCATTCTTGACATCCCCCTTCAGGT
CACTGTTGAACTGGGAAGAACTAAGTTACTGGTCAAGGACATACTGCAGTTGAATCAGGGGGCTGTTGTTGAACTCACCA
AGCTTGCCGGCGAACCGCTGGACATCTTTGTAAACTCTAAGCTGGTTGCCCGTGGCGAGGCAGTGGTAGTAAACGAAAAA
TTTGGTGTGCGCCTGGTCGACATCGTCAGCCCCAACGAGCGGGTGGAGAAGATTTTGTGA

Upstream 100 bases:

>100_bases
GAGTTGCTCGTAAAAGTGGAAGGGACAACTAAGTATTTTGCCATTCCCGGCATTCGTCATGGAAACAGGGCGATACAAAT
AACTGCGATAGGGGGCAGTG

Downstream 100 bases:

>100_bases
AAAGAGCGGTCATCGCGCTGCTCCTCACCCTTCCCTCATATGCCTGTGCCGCTGGAGTTCCCGGCCAGGAGTACAGCTTT
CTCTCCAGTTTTATTCAAAT

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSDKPESNETEIDRKNLDFILDIPLQVTVELGRTKLLVKDILQLNQGAVVELTKLAGEPLDIFVNSKLVARGEAVVVNEK
FGVRLVDIVSPNERVEKIL

Sequences:

>Translated_99_residues
MSDKPESNETEIDRKNLDFILDIPLQVTVELGRTKLLVKDILQLNQGAVVELTKLAGEPLDIFVNSKLVARGEAVVVNEK
FGVRLVDIVSPNERVEKIL
>Mature_98_residues
SDKPESNETEIDRKNLDFILDIPLQVTVELGRTKLLVKDILQLNQGAVVELTKLAGEPLDIFVNSKLVARGEAVVVNEKF
GVRLVDIVSPNERVEKIL

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=84, Percent_Identity=53.5714285714286, Blast_Score=106, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 11038; Mature: 10907

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKPESNETEIDRKNLDFILDIPLQVTVELGRTKLLVKDILQLNQGAVVELTKLAGEPL
CCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCE
DIFVNSKLVARGEAVVVNEKFGVRLVDIVSPNERVEKIL
EEEECCEEEECCCEEEEECCCCEEEEEEECCCHHHHHCC
>Mature Secondary Structure 
SDKPESNETEIDRKNLDFILDIPLQVTVELGRTKLLVKDILQLNQGAVVELTKLAGEPL
CCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCE
DIFVNSKLVARGEAVVVNEKFGVRLVDIVSPNERVEKIL
EEEECCEEEECCCEEEEECCCCEEEEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622217; 10984043 [H]