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The map label for this gene is fliM [H]

Identifier: 118581837

GI number: 118581837

Start: 3798275

End: 3799252

Strand: Direct

Name: fliM [H]

Synonym: Ppro_3437

Alternate gene names: 118581837

Gene position: 3798275-3799252 (Clockwise)

Preceding gene: 118581836

Following gene: 118581838

Centisome position: 94.77

GC content: 49.8

Gene sequence:

>978_bases
ATGGAAAAAATTCTTTCAAAAGCCGAAATTGAAGCACTTCTCAATGCCGTGTTCGAAGGTCGTATTGAGCCTGAGAGAGA
ACTGGCCAAAGCCGAGGGGAGCGTAGTCACCTATGACCTCTTCAACACCGAGGCCCATAAGGGCTTTGTCCCCAATCTCG
ACATCATATATGACAGCTTCATCCGCTATAACCGAGTCAGCCTCTCCAATCGACTGCGCAAGGTTGTTGAAATTAAAAAA
ATCGGCGCCCGCTCCTATAAGTTCGACGATTTTATTCAAACGCTTCCCTCTCCGGTTTGCATGGCTATTTTCAAGATCGA
GCCTCTCAAGGGAGCTGCTCTGATCTCCTTTGACAGTACGCTTGTGCTTTCGCTTGTGGACAGTCTTCTGGGAGGTACCG
GCACAAGCAAGGTCTCCATGGCAAACCGTATGTTTACCTCCATAGAACTGCGTCTGGTGGAGAAGATCGTTGCGGACATT
CTGCAGGATCTGGAAAAGGCCTGGGCGCCGCTCTATGCTACACACATGAACCTGCTGCGCATGGAGATGAACCCTCGCCT
AATCAATATCGTCCCGCCTGAATACCAGATCGTGACCATGTCGCTCAAGATTCAGATCGAAGACATATCGGGTAATATGG
TCTTTGCCGTCCCCTACATGACAATTGAGCCGATTCGTGACAAGCTCAAAGCGGGGATGCAGTTTGATCTTATGGCTATC
GACCCTCAGTGGTCTTCCCGCCTGTCATCCGGTCTCATGGAGGCTCCGCTTGAGATTGTCGTCGAGATGGGTAATGCCAA
TATAACACTCGGTGAGCTTCTTGATCTAGCAGCCGGAGATACGATCATGCTCGATAAACCCTGTTCCAGTGAGTTGCTCG
TAAAAGTGGAAGGGACAACTAAGTATTTTGCCATTCCCGGCATTCGTCATGGAAACAGGGCGATACAAATAACTGCGATA
GGGGGCAGTGGTGAGTGA

Upstream 100 bases:

>100_bases
TGAAATTCTGGTGTCGGTGAACAAGATTATTACGCCTGCCAGGATAACCAAGGTCTATTTTACCGACTTTGTCGTCCAGT
AGGGTATCTTGCGAACCGGA

Downstream 100 bases:

>100_bases
TAAGCCTGAATCAAACGAGACGGAAATAGACAGAAAGAACCTCGACTTCATTCTTGACATCCCCCTTCAGGTCACTGTTG
AACTGGGAAGAACTAAGTTA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEKILSKAEIEALLNAVFEGRIEPERELAKAEGSVVTYDLFNTEAHKGFVPNLDIIYDSFIRYNRVSLSNRLRKVVEIKK
IGARSYKFDDFIQTLPSPVCMAIFKIEPLKGAALISFDSTLVLSLVDSLLGGTGTSKVSMANRMFTSIELRLVEKIVADI
LQDLEKAWAPLYATHMNLLRMEMNPRLINIVPPEYQIVTMSLKIQIEDISGNMVFAVPYMTIEPIRDKLKAGMQFDLMAI
DPQWSSRLSSGLMEAPLEIVVEMGNANITLGELLDLAAGDTIMLDKPCSSELLVKVEGTTKYFAIPGIRHGNRAIQITAI
GGSGE

Sequences:

>Translated_325_residues
MEKILSKAEIEALLNAVFEGRIEPERELAKAEGSVVTYDLFNTEAHKGFVPNLDIIYDSFIRYNRVSLSNRLRKVVEIKK
IGARSYKFDDFIQTLPSPVCMAIFKIEPLKGAALISFDSTLVLSLVDSLLGGTGTSKVSMANRMFTSIELRLVEKIVADI
LQDLEKAWAPLYATHMNLLRMEMNPRLINIVPPEYQIVTMSLKIQIEDISGNMVFAVPYMTIEPIRDKLKAGMQFDLMAI
DPQWSSRLSSGLMEAPLEIVVEMGNANITLGELLDLAAGDTIMLDKPCSSELLVKVEGTTKYFAIPGIRHGNRAIQITAI
GGSGE
>Mature_325_residues
MEKILSKAEIEALLNAVFEGRIEPERELAKAEGSVVTYDLFNTEAHKGFVPNLDIIYDSFIRYNRVSLSNRLRKVVEIKK
IGARSYKFDDFIQTLPSPVCMAIFKIEPLKGAALISFDSTLVLSLVDSLLGGTGTSKVSMANRMFTSIELRLVEKIVADI
LQDLEKAWAPLYATHMNLLRMEMNPRLINIVPPEYQIVTMSLKIQIEDISGNMVFAVPYMTIEPIRDKLKAGMQFDLMAI
DPQWSSRLSSGLMEAPLEIVVEMGNANITLGELLDLAAGDTIMLDKPCSSELLVKVEGTTKYFAIPGIRHGNRAIQITAI
GGSGE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=319, Percent_Identity=27.8996865203762, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 36060; Mature: 36060

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKILSKAEIEALLNAVFEGRIEPERELAKAEGSVVTYDLFNTEAHKGFVPNLDIIYDSF
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
IRYNRVSLSNRLRKVVEIKKIGARSYKFDDFIQTLPSPVCMAIFKIEPLKGAALISFDST
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHEEEEEEECCCCCEEEEEECHH
LVLSLVDSLLGGTGTSKVSMANRMFTSIELRLVEKIVADILQDLEKAWAPLYATHMNLLR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
MEMNPRLINIVPPEYQIVTMSLKIQIEDISGNMVFAVPYMTIEPIRDKLKAGMQFDLMAI
EECCCEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEHHHHHHHHHCCCEEEEEEE
DPQWSSRLSSGLMEAPLEIVVEMGNANITLGELLDLAAGDTIMLDKPCSSELLVKVEGTT
CCHHHHHHHHHHHHCCHHEEEEECCCCEEHHHHHHHCCCCEEEECCCCCCCEEEEEECCE
KYFAIPGIRHGNRAIQITAIGGSGE
EEEECCCEECCCEEEEEEEECCCCC
>Mature Secondary Structure
MEKILSKAEIEALLNAVFEGRIEPERELAKAEGSVVTYDLFNTEAHKGFVPNLDIIYDSF
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHH
IRYNRVSLSNRLRKVVEIKKIGARSYKFDDFIQTLPSPVCMAIFKIEPLKGAALISFDST
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHEEEEEEECCCCCEEEEEECHH
LVLSLVDSLLGGTGTSKVSMANRMFTSIELRLVEKIVADILQDLEKAWAPLYATHMNLLR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
MEMNPRLINIVPPEYQIVTMSLKIQIEDISGNMVFAVPYMTIEPIRDKLKAGMQFDLMAI
EECCCEEEEECCCCEEEEEEEEEEEEEECCCCEEEEECCEEHHHHHHHHHCCCEEEEEEE
DPQWSSRLSSGLMEAPLEIVVEMGNANITLGELLDLAAGDTIMLDKPCSSELLVKVEGTT
CCHHHHHHHHHHHHCCHHEEEEECCCCEEHHHHHHHCCCCEEEECCCCCCCEEEEEECCE
KYFAIPGIRHGNRAIQITAIGGSGE
EEEECCCEECCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]