| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581784
Identifier: 118581784
GI number: 118581784
Start: 3734711
End: 3736333
Strand: Reverse
Name: 118581784
Synonym: Ppro_3384
Alternate gene names: NA
Gene position: 3736333-3734711 (Counterclockwise)
Preceding gene: 118581785
Following gene: 118581783
Centisome position: 93.22
GC content: 61.92
Gene sequence:
>1623_bases ATGAACAAACGTCTTTTCCTGGTCTGCCCCCTTCTCAGCCTCCTACTGTGCATCTCCTTCCCGGCCTCATCCTGCTGGGC GCTCGCCTCCAACAACATCCCCCTGGACAGCCCGCTGTACGGTTATCTGGACAAGCTTGCCGGATACGGTTTGATTGGCA GTGATTTCAAGGGTATCAGGCCGTTCAGCAAGGCCGAGGCCGCGCGGCTGCTGCAGGAGGCGCAGGGTAACATCCAACAG TCGCCCGACCCCGTTCCCCCCCTGGTCGCCCAGCTGATGGTGCGTATCCGTGAACTCATCCCCCGGGAAGCTTCGCTCAG GGAACAGCCGGACATGAAGCCGCCCCTGATCAGCTTCGATCCGAAGTCATCCATGCGCCTGCGCTATGCCTATCTGGATG GTACGCCCCGCAACTACAAGCGCCAGGTGCATGATCCCGGCGATGACGGCGTCTTCGGCATTGGCTCGGGACTGCGCCCC AAGAATCCCTATCCCTCGCCGGCAACCCAGCGCGGCAGCGAGGGGACGCCGCTCATGGCCAATAACAACGGCATCGTCTA CCGCGAGGGACATAATGCCGAGCTGCGCTGGGCGGTGGAGGGGCACCTGGGTGGGGACGTCTCCGGCCTGCTGGAGACCT CCCTGCTCTACTCCAAAAGTGGATCGGATGCGGACCTTGAGCTGAACCGGGGCTATGTCAAGTTGGGGGGAGGGTCGCTG GAGCTGGAGGCGGGCAAGGATGAGAACTGGCTGGGGCTGGGGTATCGCGGCGCCATCACCCTTTCCAACAATGCCGAAAA CATGACCCAGGTCAAGCTCTCCAGCCCGGAACCGTTCAGGGTCAAGTACGTGGGCGACATGAAGTTCGCCCTGATCGGCT CCCGTCTGGATAAAACCGTAACCGATGGAGAAGAGCGCCAGCCCTGGTTCTATGCCTTGAAGCTGTCAGCCAAGCCGACA TCCAACCTGGAGATTGGTTTCAACCTGGGCAGGCAGGTGGGCGGTCCGGGGGTTAACAACAGCCTGGGAGACATGGTGCG AGGGCTTGTCGGCGGCACCGGCGCGGACAACTCCAACGGCATGGCCGGTTTCGAGATGCGCTACCGCATCCCCTGGCTGC GCAATACCGAGCTGTACGGCGAGTTTTCCGGCGAAGATACGGCGGCCTTCTGGCCCATTGTGGAGAGTTATCTGGCCGGC ATCTACATACCCCGGCTGACCTCTGACGGCAAAAACGACTTCCGCTTCGAATTCTTTCAGGGCAACCGGATCCTCTACAC CAACAGCACCTTCCCCGCCGGTTACCTGTACAAGAACATGCCCATCGGCCACTCCCAGGGGGGAGCCACCCGGGACTACT ACAGCCGCTTCTGCCACTGGTTCGGCGTGCGCAACAACCTGGCGCTGGAGTACATTTACACCACCCGCGGCGAAAGCGGC CGCATGCCTGGCCAGGCGGTGGAATACAAGCATGCCGGCCGCGTCTCCTGGACCCTGCCGGTGTACGGCGACCTGGATGC CCAGGCGACCTACGGCATCGAGAAGGTCTCCAACCTGAACCTGGAGAACGGCGATGACAGGACCAACCAGCTGGTCAGCA TCGAGCTGAGATACCGCTACTGA
Upstream 100 bases:
>100_bases TTTTATGCTCAACCCATGAGAAACCTCCTATACTCGGGGACGGCTCTGTGGTATCTTCTGCTGCCGCAGGGTTGTCACCT CTTGTGTTCGGAGTGTTTTG
Downstream 100 bases:
>100_bases AATACCCTCGGGCAACAGCCAGCCCCAAAGAAATCTCGAATATACTCTTCGAACAAAAAGCCGCGTCGCAGGATGCGGCT TTTTCTGATAGTATCCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY
Sequences:
>Translated_540_residues MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY >Mature_540_residues MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIRPFSKAEAARLLQEAQGNIQQ SPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFDPKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRP KNPYPSPATQRGSEGTPLMANNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTVTDGEERQPWFYALKLSAKPT SNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNGMAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAG IYIPRLTSDGKNDFRFEFFQGNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59854; Mature: 59854
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIR CCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCC PFSKAEAARLLQEAQGNIQQSPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFD CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC PKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRPKNPYPSPATQRGSEGTPLMA CCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEE NNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL CCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCEEECCCEEEECCCEE ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTV EEECCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEEHHHHHHHHC TDGEERQPWFYALKLSAKPTSNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNG CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC MAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAGIYIPRLTSDGKNDFRFEFFQ CEEEEEEEECCCEECCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEE GNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG CCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCC RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY CCCCHHCCCCCCCEEEEEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MNKRLFLVCPLLSLLLCISFPASSCWALASNNIPLDSPLYGYLDKLAGYGLIGSDFKGIR CCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCC PFSKAEAARLLQEAQGNIQQSPDPVPPLVAQLMVRIRELIPREASLREQPDMKPPLISFD CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC PKSSMRLRYAYLDGTPRNYKRQVHDPGDDGVFGIGSGLRPKNPYPSPATQRGSEGTPLMA CCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEE NNNGIVYREGHNAELRWAVEGHLGGDVSGLLETSLLYSKSGSDADLELNRGYVKLGGGSL CCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCEEECCCEEEECCCEE ELEAGKDENWLGLGYRGAITLSNNAENMTQVKLSSPEPFRVKYVGDMKFALIGSRLDKTV EEECCCCCCEEEECEEEEEEECCCCCCEEEEEECCCCCEEEEEECCEEEEEHHHHHHHHC TDGEERQPWFYALKLSAKPTSNLEIGFNLGRQVGGPGVNNSLGDMVRGLVGGTGADNSNG CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC MAGFEMRYRIPWLRNTELYGEFSGEDTAAFWPIVESYLAGIYIPRLTSDGKNDFRFEFFQ CEEEEEEEECCCEECCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEE GNRILYTNSTFPAGYLYKNMPIGHSQGGATRDYYSRFCHWFGVRNNLALEYIYTTRGESG CCEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCC RMPGQAVEYKHAGRVSWTLPVYGDLDAQATYGIEKVSNLNLENGDDRTNQLVSIELRYRY CCCCHHCCCCCCCEEEEEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA