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The map label for this gene is yedQ [H]

Identifier: 118581762

GI number: 118581762

Start: 3710075

End: 3711217

Strand: Reverse

Name: yedQ [H]

Synonym: Ppro_3362

Alternate gene names: 118581762

Gene position: 3711217-3710075 (Counterclockwise)

Preceding gene: 118581763

Following gene: 118581759

Centisome position: 92.6

GC content: 60.54

Gene sequence:

>1143_bases
TTGTTACGCAAGCTGAAGTCCATACTGCAGCAAATCGGTGTTGACGATCGGTTCGATACTGCCACTGAGGAGTCCTATCT
GGACTTCAAGTTCAACGACTCACGGGGCGTGGTCATCAGCGTCACCATAGCCACGTTCTTTCTCATCATCGGCCTCTGGG
TATGGGACTGGACGATTGATCCCCCGCACGCCATGGATGCGCTGCCGACCAGGATACTCCTGGGCGTGATCGAGATACTC
TACCCCATCGCTCTGGCAGCAGGTGTGCGTCGCGCCGTTCTCCCCTGGCTGCTGGCGCTGATTGTCCTGTCAATGGAGAC
CCTCTTCCTCTACCACCTGACCCTGCTCGAGGGGGGGCTGGTCTACGGCGTATCCGGCTTCATGTTCTGGTTCATGATAT
CCGTATTCACCGGACTCTCCTTCAACCTGGCCCCCACCCTGCTGACGGTGGTTGCCATTGCTGTTCTGCCCAACATCCTG
GTTCGTCTTGGCCTGGCGCCCCAGCTGGAACTCCCCCTGTACAATGCCCTGGTCTGGCCCACCTGCCTGATCGCCATGTT
CGGCAATCTGGCGCTGGACAGGCTCTACCGCCGCCTGTTCCGCTATCGCCGGAGCATCGAACATACGGCACGCATCGATA
CCCTGACCGGCATCGCCAACCGCTTTCATTTCAGCGAGGCCGCACCGGTTCTGCTGGAGCTCTGCCGCCGGCACGAGCAT
CCCATCAGTGCATTCATGGTCGATATCGACCATTTCAAACAGATCAATGACAGGTACGGACACCCGGAGGGGGACGAGGT
CATCCGCCTCGTCGCCGATTCCATGCGGACAAAGCTGCGCAATACCGACCTGCTGGCCCGCTATGGAGGCGAGGAGTTTG
TCGTGATCCTGCCCGAAACTCCCCCCCATGCGGCGGTCGGGGTAGCTGAGTCTGTTCGCCGCACCATCGCCGAGAAGGCG
CTTGCCCTGGGGGCAGGCCGTTCCATCCGGATCACCATCAGCATCGGTGTGGCTGGTTATGACCTGCTGCCGGACGATAT
CGGGCTTGAGGAACTGCTCAAGCAGGCTGATACGCGGCTGTACGAAGCAAAAGAGGGGGGCAGAAACCGGGTGGTTGCCG
CGCTCCGTGCCCCCCTGCCGTAA

Upstream 100 bases:

>100_bases
AAGAGGTGGCGCGAATCACGAACCTTGACCGCCGAACGGTCAAGAAATATATCCGGAAGGACTAATCCTGGCCCATAAAC
GGTTTCGAGAGGTAGCATCT

Downstream 100 bases:

>100_bases
TCATGACCTCTTTTCGAGGATCTCCTTCTTGATATCGCTTAAGGATTTGATGAAGGCTGCCTCCGGATCGAGGAGCTTGA
TCCCGTAACGCTCTTCCAGG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLRKLKSILQQIGVDDRFDTATEESYLDFKFNDSRGVVISVTIATFFLIIGLWVWDWTIDPPHAMDALPTRILLGVIEIL
YPIALAAGVRRAVLPWLLALIVLSMETLFLYHLTLLEGGLVYGVSGFMFWFMISVFTGLSFNLAPTLLTVVAIAVLPNIL
VRLGLAPQLELPLYNALVWPTCLIAMFGNLALDRLYRRLFRYRRSIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEH
PISAFMVDIDHFKQINDRYGHPEGDEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPETPPHAAVGVAESVRRTIAEKA
LALGAGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRLYEAKEGGRNRVVAALRAPLP

Sequences:

>Translated_380_residues
MLRKLKSILQQIGVDDRFDTATEESYLDFKFNDSRGVVISVTIATFFLIIGLWVWDWTIDPPHAMDALPTRILLGVIEIL
YPIALAAGVRRAVLPWLLALIVLSMETLFLYHLTLLEGGLVYGVSGFMFWFMISVFTGLSFNLAPTLLTVVAIAVLPNIL
VRLGLAPQLELPLYNALVWPTCLIAMFGNLALDRLYRRLFRYRRSIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEH
PISAFMVDIDHFKQINDRYGHPEGDEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPETPPHAAVGVAESVRRTIAEKA
LALGAGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRLYEAKEGGRNRVVAALRAPLP
>Mature_380_residues
MLRKLKSILQQIGVDDRFDTATEESYLDFKFNDSRGVVISVTIATFFLIIGLWVWDWTIDPPHAMDALPTRILLGVIEIL
YPIALAAGVRRAVLPWLLALIVLSMETLFLYHLTLLEGGLVYGVSGFMFWFMISVFTGLSFNLAPTLLTVVAIAVLPNIL
VRLGLAPQLELPLYNALVWPTCLIAMFGNLALDRLYRRLFRYRRSIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEH
PISAFMVDIDHFKQINDRYGHPEGDEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPETPPHAAVGVAESVRRTIAEKA
LALGAGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRLYEAKEGGRNRVVAALRAPLP

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=203, Percent_Identity=40.3940886699507, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI87081881, Length=178, Percent_Identity=38.7640449438202, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786584, Length=177, Percent_Identity=36.1581920903955, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1787262, Length=278, Percent_Identity=32.0143884892086, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI145693134, Length=164, Percent_Identity=35.3658536585366, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787802, Length=173, Percent_Identity=34.6820809248555, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788381, Length=169, Percent_Identity=32.5443786982249, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081974, Length=192, Percent_Identity=27.0833333333333, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787816, Length=165, Percent_Identity=31.5151515151515, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788085, Length=166, Percent_Identity=33.1325301204819, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787541, Length=166, Percent_Identity=31.3253012048193, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI87081977, Length=153, Percent_Identity=30.0653594771242, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787056, Length=172, Percent_Identity=31.9767441860465, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 42555; Mature: 42555

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLKSILQQIGVDDRFDTATEESYLDFKFNDSRGVVISVTIATFFLIIGLWVWDWTID
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCC
PPHAMDALPTRILLGVIEILYPIALAAGVRRAVLPWLLALIVLSMETLFLYHLTLLEGGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VYGVSGFMFWFMISVFTGLSFNLAPTLLTVVAIAVLPNILVRLGLAPQLELPLYNALVWP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
TCLIAMFGNLALDRLYRRLFRYRRSIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PISAFMVDIDHFKQINDRYGHPEGDEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPET
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCC
PPHAAVGVAESVRRTIAEKALALGAGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
YEAKEGGRNRVVAALRAPLP
HHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLRKLKSILQQIGVDDRFDTATEESYLDFKFNDSRGVVISVTIATFFLIIGLWVWDWTID
CHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCC
PPHAMDALPTRILLGVIEILYPIALAAGVRRAVLPWLLALIVLSMETLFLYHLTLLEGGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
VYGVSGFMFWFMISVFTGLSFNLAPTLLTVVAIAVLPNILVRLGLAPQLELPLYNALVWP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
TCLIAMFGNLALDRLYRRLFRYRRSIEHTARIDTLTGIANRFHFSEAAPVLLELCRRHEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PISAFMVDIDHFKQINDRYGHPEGDEVIRLVADSMRTKLRNTDLLARYGGEEFVVILPET
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCC
PPHAAVGVAESVRRTIAEKALALGAGRSIRITISIGVAGYDLLPDDIGLEELLKQADTRL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
YEAKEGGRNRVVAALRAPLP
HHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]