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The map label for this gene is ymdB [H]

Identifier: 118581711

GI number: 118581711

Start: 3649386

End: 3650171

Strand: Reverse

Name: ymdB [H]

Synonym: Ppro_3311

Alternate gene names: 118581711

Gene position: 3650171-3649386 (Counterclockwise)

Preceding gene: 118581712

Following gene: 118581710

Centisome position: 91.07

GC content: 62.21

Gene sequence:

>786_bases
ATGCCCGTTAAGATTCTTTTCATCGGCGACATCATCGGCAAGCCGGGCCGCCAGGCGCTTTCCCGCCAGCTGGACCGCCT
GGTGGACCGTTACTGCGTCGACATGGTCATTGCCAATGGCGAGAATGCGGCCGGCGGATTCGGCCTGACGACGGATACCG
CCAAAGAGCTGTTCGACCTGGGGGTAGGCGGCCTCACCAGCGGCAACCACATCTGGGACAAGAAGGAACAGGTCCCGCTG
GTGCTGGCCAGCCAGCGCATCATCAGGCCTGCCAACTACCCCGAGGGTGTTGCCGGACAGGGGAGCATGATTCTCGCCAC
GCCCGGTGGTGTCAAGGTAGGGGTGCTCAACCTTGAGGGACGGGTGTTCATGAAATACCTAGAATGCCCCTTCAGGACCG
CCGACCGGGAAATCGAGCGTCTGCGCCAGGAGACGCCGATCATCCTAGTGGACTTTCACGCCGAGGCTACCTCGGAAAAG
GCCTCCCTGGGGTGGTACCTGGATGGCCGGGTCAGCGCGGTGATCGGCACCCACACCCACGTGCAGACCGCCGACGAACG
CATCCTGACCCAGGGGACGGCATACATGTCCGATGCCGGCATGACCGGCAGCTTTGATTCGGTGATCGGCATCGGCAAGG
ACGAGGCCATCCGCAAGTTCCTGACCCAGCTGCCGGTCAAGTTCGAGGTGCCCAAGAAGGATATCCGCCTTAACGGAGTC
GTCATCGATATTGATGAAGCCACCGGCAAGGCGCTCGCCATCGAACGCATCGCGGTCTGCTGCTGA

Upstream 100 bases:

>100_bases
CTGATCATGGCCCGTGACATCGCCAAGAAAATCGAAGCGGAGATGACCTATCCCGGCCAGATCAAGGTCAACGTCATTCG
GGAAACGCGGGCAGTGGAAT

Downstream 100 bases:

>100_bases
AAAACAACGCCACAGCGGTCACGGAATTATGGACTGAATCCATGATGCCGTGACTGCTGTGGCTACATTATTATGAGGAG
CCTGAACATGTCCGTAGCCG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPVKILFIGDIIGKPGRQALSRQLDRLVDRYCVDMVIANGENAAGGFGLTTDTAKELFDLGVGGLTSGNHIWDKKEQVPL
VLASQRIIRPANYPEGVAGQGSMILATPGGVKVGVLNLEGRVFMKYLECPFRTADREIERLRQETPIILVDFHAEATSEK
ASLGWYLDGRVSAVIGTHTHVQTADERILTQGTAYMSDAGMTGSFDSVIGIGKDEAIRKFLTQLPVKFEVPKKDIRLNGV
VIDIDEATGKALAIERIAVCC

Sequences:

>Translated_261_residues
MPVKILFIGDIIGKPGRQALSRQLDRLVDRYCVDMVIANGENAAGGFGLTTDTAKELFDLGVGGLTSGNHIWDKKEQVPL
VLASQRIIRPANYPEGVAGQGSMILATPGGVKVGVLNLEGRVFMKYLECPFRTADREIERLRQETPIILVDFHAEATSEK
ASLGWYLDGRVSAVIGTHTHVQTADERILTQGTAYMSDAGMTGSFDSVIGIGKDEAIRKFLTQLPVKFEVPKKDIRLNGV
VIDIDEATGKALAIERIAVCC
>Mature_260_residues
PVKILFIGDIIGKPGRQALSRQLDRLVDRYCVDMVIANGENAAGGFGLTTDTAKELFDLGVGGLTSGNHIWDKKEQVPLV
LASQRIIRPANYPEGVAGQGSMILATPGGVKVGVLNLEGRVFMKYLECPFRTADREIERLRQETPIILVDFHAEATSEKA
SLGWYLDGRVSAVIGTHTHVQTADERILTQGTAYMSDAGMTGSFDSVIGIGKDEAIRKFLTQLPVKFEVPKKDIRLNGVV
IDIDEATGKALAIERIAVCC

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28327; Mature: 28196

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKILFIGDIIGKPGRQALSRQLDRLVDRYCVDMVIANGENAAGGFGLTTDTAKELFDL
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHC
GVGGLTSGNHIWDKKEQVPLVLASQRIIRPANYPEGVAGQGSMILATPGGVKVGVLNLEG
CCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCC
RVFMKYLECPFRTADREIERLRQETPIILVDFHAEATSEKASLGWYLDGRVSAVIGTHTH
HHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCEEEEEEECCCC
VQTADERILTQGTAYMSDAGMTGSFDSVIGIGKDEAIRKFLTQLPVKFEVPKKDIRLNGV
HHHHHHHHHHCCCCEECCCCCCCCCHHHEECCCHHHHHHHHHHCCEEEECCCCCEEECCE
VIDIDEATGKALAIERIAVCC
EEEECCCCCCEEEHHHHHHCC
>Mature Secondary Structure 
PVKILFIGDIIGKPGRQALSRQLDRLVDRYCVDMVIANGENAAGGFGLTTDTAKELFDL
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHC
GVGGLTSGNHIWDKKEQVPLVLASQRIIRPANYPEGVAGQGSMILATPGGVKVGVLNLEG
CCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCC
RVFMKYLECPFRTADREIERLRQETPIILVDFHAEATSEKASLGWYLDGRVSAVIGTHTH
HHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCEEEEEEECCCC
VQTADERILTQGTAYMSDAGMTGSFDSVIGIGKDEAIRKFLTQLPVKFEVPKKDIRLNGV
HHHHHHHHHHCCCCEECCCCCCCCCHHHEECCCHHHHHHHHHHCCEEEECCCCCEEECCE
VIDIDEATGKALAIERIAVCC
EEEECCCCCCEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]