Click here to switch to the map view.

The map label for this gene is efp1 [H]

Identifier: 118581703

GI number: 118581703

Start: 3640072

End: 3640635

Strand: Reverse

Name: efp1 [H]

Synonym: Ppro_3303

Alternate gene names: 118581703

Gene position: 3640635-3640072 (Counterclockwise)

Preceding gene: 118581704

Following gene: 118581702

Centisome position: 90.83

GC content: 60.99

Gene sequence:

>564_bases
ATGTACAGCACGTCTGATTTCAAGAAGGGGCTGGTGATCCAACTGGACGGAGCCCCCTGTCTGATCGTGGATGTCACGGT
CCAGTCCCCCACTGCCCGTGGCGCCAACACCATGGTCAAGACCAAGTACCGCAACCTGATCACCAGCCAGGTGCTGGAGA
AGACCTTCCGCTCCGGTGACAAGGTGGACGAGGCGGATTTCGAGCGCCACAAGGGACAGTTTCTCTACGCCGACGGCGGC
AGGGGCGTTTTCATGGATCTGGAGAACTACGAACAGTTCGAGGTGGAGCAGGATGAGTTCGCACCCCTTTCCCCCTATCT
GCTGGAGGGGACCGAGGTGGTGCTGGGCCTTTTCGAGGCACGGCTGGTCAATGTGGAGCTTCCCATGACCGTGGAGTTGA
CCGTTGCCGAAACCGTGCCGGTCATGAAGAACGCCACCGCTACCGCCCAGACCAAGGAGGCGATGCTGGAGACCGGGCTC
AAGCTGCAGGTGCCCCCCTATCTGGAGGTGGGAGAGCGGATCAAAGTTGATACCCGCGACGGCCGCTTCATCTCCCGGGC
CTGA

Upstream 100 bases:

>100_bases
GTGCGCGGCGAGTTCACCCCCCGCGGCGGCATCCCCTTCTGGCCTACGGCCGAGTACCGCAGGCCATAATTTTATTTCGT
CATAGATTCAAGGAGTTTGC

Downstream 100 bases:

>100_bases
TTGATGCCAGGGTAGAGCCGTATGGTACCCTGCTTTTCATGGAAAACAGGTTGTTCGCTGGAAAATGGTTGACAGCCATG
GTCGGCTGATTTAACATGAC

Product: elongation factor P

Products: NA

Alternate protein names: EF-P 1 [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MYSTSDFKKGLVIQLDGAPCLIVDVTVQSPTARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLENYEQFEVEQDEFAPLSPYLLEGTEVVLGLFEARLVNVELPMTVELTVAETVPVMKNATATAQTKEAMLETGL
KLQVPPYLEVGERIKVDTRDGRFISRA

Sequences:

>Translated_187_residues
MYSTSDFKKGLVIQLDGAPCLIVDVTVQSPTARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLENYEQFEVEQDEFAPLSPYLLEGTEVVLGLFEARLVNVELPMTVELTVAETVPVMKNATATAQTKEAMLETGL
KLQVPPYLEVGERIKVDTRDGRFISRA
>Mature_187_residues
MYSTSDFKKGLVIQLDGAPCLIVDVTVQSPTARGANTMVKTKYRNLITSQVLEKTFRSGDKVDEADFERHKGQFLYADGG
RGVFMDLENYEQFEVEQDEFAPLSPYLLEGTEVVLGLFEARLVNVELPMTVELTVAETVPVMKNATATAQTKEAMLETGL
KLQVPPYLEVGERIKVDTRDGRFISRA

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=36.5079365079365, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1790590, Length=185, Percent_Identity=34.5945945945946, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20875; Mature: 20875

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTSDFKKGLVIQLDGAPCLIVDVTVQSPTARGANTMVKTKYRNLITSQVLEKTFRSGD
CCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KVDEADFERHKGQFLYADGGRGVFMDLENYEQFEVEQDEFAPLSPYLLEGTEVVLGLFEA
CCCCHHHHHCCCCEEEECCCCEEEEECCCCCEECCCCCCCCCCCCHHCCHHHHHHHHHHH
RLVNVELPMTVELTVAETVPVMKNATATAQTKEAMLETGLKLQVPPYLEVGERIKVDTRD
EEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC
GRFISRA
CEEEECC
>Mature Secondary Structure
MYSTSDFKKGLVIQLDGAPCLIVDVTVQSPTARGANTMVKTKYRNLITSQVLEKTFRSGD
CCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
KVDEADFERHKGQFLYADGGRGVFMDLENYEQFEVEQDEFAPLSPYLLEGTEVVLGLFEA
CCCCHHHHHCCCCEEEECCCCEEEEECCCCCEECCCCCCCCCCCCHHCCHHHHHHHHHHH
RLVNVELPMTVELTVAETVPVMKNATATAQTKEAMLETGLKLQVPPYLEVGERIKVDTRD
EEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCC
GRFISRA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA