| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581702
Identifier: 118581702
GI number: 118581702
Start: 3638637
End: 3639770
Strand: Reverse
Name: 118581702
Synonym: Ppro_3302
Alternate gene names: NA
Gene position: 3639770-3638637 (Counterclockwise)
Preceding gene: 118581703
Following gene: 118581701
Centisome position: 90.81
GC content: 63.84
Gene sequence:
>1134_bases ATGAAAAATCCAAAGATCTCAGATATAGTTGGAATTATTGCGAAAATGGCTCCGTCGGGTCTGGCGGAGTCGTGGGATAA CTCCGGTCTGCAGCTGGGCGACCCGTCGGCCATGGTGTCACGAATCATGGTCAGCCTGGACGCCACCATGGCTACCATCC AATCGGCCCTTGCCTGCGACTGCCAGCTCCTCATCAGCCACCATCCCCTGATCTTCAACGCTCCGAAATCCATATCAGCA ACTACCCCCCAGGGGGCGTGCATCCATGCCGCCATTCGCGGCGGTCTTTCCATTATCAGCATGCACACCAGCTACGATTG CGCCGAAGGCGGCCTGAATGACCTGCTGGCACGGCGCATCGGCCTTTCCGCCTGCTCGCCGCTCCAGGTGACGTCCGTGC GGGAACTGGTCAAACTGGCGGTCTATGTTCCCGGCGAGCATCTGGAGCGGTTGCGCTTGGCGCTCCTGCCCCACAGCGAG AAGCTGGGTGCCTACAGCGGCTGCTCCTTTGCCGCCCCCGGCCAGGGAACTTTTACCCCACTGGATGGAGCGCACCCCTT CGTCGGGACCGTCGGCTCCCGGGAGATGGTTGATGAGCAGCGCCTGGAGCTGCTCCTGGACCGGGCCGCTCTCCCGCGCG CAATCAAGTCCCTTCTGGCCGCCCATCCCTACGAGGAGCCGGCCTATGACATCTACCCGCTGCTCAACGAGGGGCGCAAG CTTGGCCTGGGACGGGTCGGCCGCTTGCCGGAAGCGGTTTCCCTGGCCGGCTTTGCGGAGCGGCTCAGCCGGGATCTTGC GGCGCCGGGCCTGCGCTTTGTGGGGAATCCGGAGGCACGGGTGAGCAAGGTGGCCCTCTGCGGCGGCAGCGGTGCCTCGC TGATGCGGGCGGCCGTGCGGGCCGGCGCCGACGTGCTGGTGAGCGGCGATATCAAGTATCACGACGCCCGTGATGCGGAG AATCTGGGACTTGCCCTGGTGGATGCAGGCCATTTTGCCACCGAGATCATCATGGTGGACGGGGTGACCGAACGGCTTGG CCGGATGCTTGCCGAGGCGGGATATGCGGAATGCGGCGTCGTGCCCTGTTGCGTTGAAAACGATCCATTCCGCTGTGTGA GTCAGAGTACCTAA
Upstream 100 bases:
>100_bases AGAGTCGCCGGATGCCGGCAAAACGAGAGACGGGGCGACCCATGTTATCACATGCTCAAGAGTGCACACCGAAAGGTTGC ACTCTTTTTCTTTGTAGCGA
Downstream 100 bases:
>100_bases GGAAGCGCGACACAAATAAAGAGTATTGGGAGGACGCTGTTTTGAAAAAGAAACTTGAGATGTTGGAGCAACTGCAGGAG ATCGACACTCAGATCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST
Sequences:
>Translated_377_residues MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST >Mature_377_residues MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST
Specific function: Unknown
COG id: COG0327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0135 (NIF3) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321217, Length=124, Percent_Identity=31.4516129032258, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=29.9212598425197, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002678 - InterPro: IPR017221 [H]
Pfam domain/function: PF01784 NIF3 [H]
EC number: NA
Molecular weight: Translated: 39748; Mature: 39748
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACD CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CQLLISHHPLIFNAPKSISATTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRI HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHCCHHHHHHHHH GLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSEKLGAYSGCSFAAPGQGTFTP CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC LDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVR ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHEEEEEECCCCHHHHHHHHH AGADVLVSGDIKYHDARDAENLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGV CCCCEEEECCEEECCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC VPCCVENDPFRCVSQST EEEEECCCCCCCCCCCC >Mature Secondary Structure MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACD CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CQLLISHHPLIFNAPKSISATTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRI HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHCCHHHHHHHHH GLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSEKLGAYSGCSFAAPGQGTFTP CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC LDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVR ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHEEEEEECCCCHHHHHHHHH AGADVLVSGDIKYHDARDAENLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGV CCCCEEEECCEEECCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC VPCCVENDPFRCVSQST EEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]