Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581679

Identifier: 118581679

GI number: 118581679

Start: 3612134

End: 3612988

Strand: Reverse

Name: 118581679

Synonym: Ppro_3279

Alternate gene names: NA

Gene position: 3612988-3612134 (Counterclockwise)

Preceding gene: 118581680

Following gene: 118581676

Centisome position: 90.14

GC content: 64.91

Gene sequence:

>855_bases
ATGAACGGACAACGTACCCTTTCGCTCGGCTTTTCACCCTGCCCCAATGACACCTTCATGTTCTATCCGCTGGTACACGG
TCTGGTGGATACCTCTGGTATCTCCTATCGCGAGCGTCTGGAGGATGTGGAGACCCTCAACCGGTTGGCCTTGGCCGGCG
CGTTGGATGTGAGCAAGGTCTCCTACCATGCCCTGGGGCATATCCGCGATGACTATGCACTGCTGCGCGCTGGCAGCGCC
CTGGGGCGCGGTTGCGGGCCACTGCTGGTGGCGTCGCGGAGCATCGATCCCTGCGACCTGGGCTCCCAGACCATCGCCGT
GCCGGGTCGCTATACCACCGCCCTGCTACTGCTGCGCCTGTTCAATCCGGGGCTCACGAACTTCCTGGTGATGCCTTTCA
ACGAGATCATGGACGCGGTGTTGCGGGGAGATGCGGATGCCGGGCTGATCATCCACGAATCCCGCTTCACCTACCAGGGG
TATGGCCTGCGCAAGCTGGTGGACCTGGGAGAGTGGTGGGAGGGGGAGACCGGACTGCCGATCCCCTTGGGGGGGATCGT
TGCCCGCCGTTCCCTGGGGGGGGCGACCATCGCGGCGGTGGAGCGCGCCCTGGCAGACGGCGTGGCATTTGCCCGCTCAC
ACCCGGAGCAGGCGGCCCGCTACATCGGCGAGCATGCCCAGGAGATGAGCAGGGAGGTCTGCGCCGCCCACATCCAACTT
TACGTCAATGACTTCTCAGTCGACCTGGGGGACGAGGGGGTGCGGGCCATCCACTGCCTGATGGAGCGGGGAGAGCGGGC
AGGCATCATACCGGTGTCCGGGGCGCCGCTTTTTTGTGGAGAGCAGCACCCCTGA

Upstream 100 bases:

>100_bases
GACTGGATCGACTGGGAGGATGTGGATCTGCCGGTTGCCTGAGCCGGTAGTCCCACCCCCTCCTGGTCGAGCCGTCCCCC
ATACCCTCTCGGGAGTACCC

Downstream 100 bases:

>100_bases
CCGGACGTCTGCGCCGCCGGGAGCGTCTCAGGGTCGATAGTACTTCATCGCCTCGGGTATCAGGCGCTGGATGTTCTGGA
TGCGGGTCGCGTCCGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNGQRTLSLGFSPCPNDTFMFYPLVHGLVDTSGISYRERLEDVETLNRLALAGALDVSKVSYHALGHIRDDYALLRAGSA
LGRGCGPLLVASRSIDPCDLGSQTIAVPGRYTTALLLLRLFNPGLTNFLVMPFNEIMDAVLRGDADAGLIIHESRFTYQG
YGLRKLVDLGEWWEGETGLPIPLGGIVARRSLGGATIAAVERALADGVAFARSHPEQAARYIGEHAQEMSREVCAAHIQL
YVNDFSVDLGDEGVRAIHCLMERGERAGIIPVSGAPLFCGEQHP

Sequences:

>Translated_284_residues
MNGQRTLSLGFSPCPNDTFMFYPLVHGLVDTSGISYRERLEDVETLNRLALAGALDVSKVSYHALGHIRDDYALLRAGSA
LGRGCGPLLVASRSIDPCDLGSQTIAVPGRYTTALLLLRLFNPGLTNFLVMPFNEIMDAVLRGDADAGLIIHESRFTYQG
YGLRKLVDLGEWWEGETGLPIPLGGIVARRSLGGATIAAVERALADGVAFARSHPEQAARYIGEHAQEMSREVCAAHIQL
YVNDFSVDLGDEGVRAIHCLMERGERAGIIPVSGAPLFCGEQHP
>Mature_284_residues
MNGQRTLSLGFSPCPNDTFMFYPLVHGLVDTSGISYRERLEDVETLNRLALAGALDVSKVSYHALGHIRDDYALLRAGSA
LGRGCGPLLVASRSIDPCDLGSQTIAVPGRYTTALLLLRLFNPGLTNFLVMPFNEIMDAVLRGDADAGLIIHESRFTYQG
YGLRKLVDLGEWWEGETGLPIPLGGIVARRSLGGATIAAVERALADGVAFARSHPEQAARYIGEHAQEMSREVCAAHIQL
YVNDFSVDLGDEGVRAIHCLMERGERAGIIPVSGAPLFCGEQHP

Specific function: Unknown

COG id: COG2107

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30703; Mature: 30703

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQRTLSLGFSPCPNDTFMFYPLVHGLVDTSGISYRERLEDVETLNRLALAGALDVSKV
CCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
SYHALGHIRDDYALLRAGSALGRGCGPLLVASRSIDPCDLGSQTIAVPGRYTTALLLLRL
HHHHHHCCCHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHHHH
FNPGLTNFLVMPFNEIMDAVLRGDADAGLIIHESRFTYQGYGLRKLVDLGEWWEGETGLP
HCCCHHHEEECCHHHHHHHHHCCCCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCCCCC
IPLGGIVARRSLGGATIAAVERALADGVAFARSHPEQAARYIGEHAQEMSREVCAAHIQL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YVNDFSVDLGDEGVRAIHCLMERGERAGIIPVSGAPLFCGEQHP
EEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNGQRTLSLGFSPCPNDTFMFYPLVHGLVDTSGISYRERLEDVETLNRLALAGALDVSKV
CCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
SYHALGHIRDDYALLRAGSALGRGCGPLLVASRSIDPCDLGSQTIAVPGRYTTALLLLRL
HHHHHHCCCHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCEEECCCHHHHHHHHHHH
FNPGLTNFLVMPFNEIMDAVLRGDADAGLIIHESRFTYQGYGLRKLVDLGEWWEGETGLP
HCCCHHHEEECCHHHHHHHHHCCCCCCCEEEECCCCEECCCCHHHHHHHHCCCCCCCCCC
IPLGGIVARRSLGGATIAAVERALADGVAFARSHPEQAARYIGEHAQEMSREVCAAHIQL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YVNDFSVDLGDEGVRAIHCLMERGERAGIIPVSGAPLFCGEQHP
EEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA