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The map label for this gene is yfiV [H]

Identifier: 118581672

GI number: 118581672

Start: 3605772

End: 3606236

Strand: Reverse

Name: yfiV [H]

Synonym: Ppro_3272

Alternate gene names: 118581672

Gene position: 3606236-3605772 (Counterclockwise)

Preceding gene: 118581674

Following gene: 118581671

Centisome position: 89.98

GC content: 59.78

Gene sequence:

>465_bases
ATGGATGACAGGAAAGAGGTAATCGGAGATATCATCGACAATCTGAGGAGAATTTATCAGGCTGTCAGCGCGTATTCCAA
GGATGTGGTCAGGGATACCGGACTGACCGCTCCCCAGCTCTGGGCGCTGAAGATCCTGAAATGCGAATCTCCACTGATGG
TGTCGGTACTGGCGCGTCGCATGTGCCTGCATCCGGCGACGGTGGTGGGTATCCTCGATCGCCTGGAGGCCAAGGAACTG
GTCACGCGTGTACGTTCCCGCCAGGACCGCCGGGTGGTTGAGCTGAACCTGACCGAATCAGGAGAAAAGATCCTTGCCGA
TGCCCCCGAGGTCGCCCAGTCCATGCTGATCAAGGGGCTGGATACGCTGTCGGACGAACAGCGGCGCTGCGTCCGGGAGG
GAATGGAGCTGGTGGTGCGGATACTCGCCGCGGAAGGGATCAAGCCCCTGCCCCTGCAAGCATAG

Upstream 100 bases:

>100_bases
CATTGCCTTGACGAAGCGCCTGCGTGTCAATATAGTTTGTGTGACAAATTATTTGTCCCGGCAAGTGTATTTTGTCAAGG
CAATTTTGGGGGAAGCTACC

Downstream 100 bases:

>100_bases
CGATCCCGGGACTAGGCTGAGGAACCGACAACTATGGAAAAATCTGCGGTATATCGATAATGATGCATATGCGTTCCGAC
GAACGACCTCCGAGCCGTGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDDRKEVIGDIIDNLRRIYQAVSAYSKDVVRDTGLTAPQLWALKILKCESPLMVSVLARRMCLHPATVVGILDRLEAKEL
VTRVRSRQDRRVVELNLTESGEKILADAPEVAQSMLIKGLDTLSDEQRRCVREGMELVVRILAAEGIKPLPLQA

Sequences:

>Translated_154_residues
MDDRKEVIGDIIDNLRRIYQAVSAYSKDVVRDTGLTAPQLWALKILKCESPLMVSVLARRMCLHPATVVGILDRLEAKEL
VTRVRSRQDRRVVELNLTESGEKILADAPEVAQSMLIKGLDTLSDEQRRCVREGMELVVRILAAEGIKPLPLQA
>Mature_154_residues
MDDRKEVIGDIIDNLRRIYQAVSAYSKDVVRDTGLTAPQLWALKILKCESPLMVSVLARRMCLHPATVVGILDRLEAKEL
VTRVRSRQDRRVVELNLTESGEKILADAPEVAQSMLIKGLDTLSDEQRRCVREGMELVVRILAAEGIKPLPLQA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17274; Mature: 17274

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRKEVIGDIIDNLRRIYQAVSAYSKDVVRDTGLTAPQLWALKILKCESPLMVSVLARR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
MCLHPATVVGILDRLEAKELVTRVRSRQDRRVVELNLTESGEKILADAPEVAQSMLIKGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHH
DTLSDEQRRCVREGMELVVRILAAEGIKPLPLQA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDDRKEVIGDIIDNLRRIYQAVSAYSKDVVRDTGLTAPQLWALKILKCESPLMVSVLARR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
MCLHPATVVGILDRLEAKELVTRVRSRQDRRVVELNLTESGEKILADAPEVAQSMLIKGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHH
DTLSDEQRRCVREGMELVVRILAAEGIKPLPLQA
HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]