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The map label for this gene is ynaI [C]

Identifier: 118581647

GI number: 118581647

Start: 3565490

End: 3566635

Strand: Reverse

Name: ynaI [C]

Synonym: Ppro_3246

Alternate gene names: 118581647

Gene position: 3566635-3565490 (Counterclockwise)

Preceding gene: 118581649

Following gene: 118581646

Centisome position: 88.99

GC content: 59.42

Gene sequence:

>1146_bases
ATGAGAGAGTTGTACAGCACCGCGGAATCCATTCTGCGACAGACCTTCCTCGGCATCAGCCTGAGCCGCTTCGCCGGGGC
CTTTCTCGTACTGTTTCTGTCATTTATCCTGAAGAAGATCCTCAACCACCTGTTTTTCAAGGTTGTCTTTCCCCTGGCAG
AGAAGACCAGGAGCCGCTACGACGACCTGTTCTTCCAGGCAATCCGCCAGCCGGCCGAGTGGCTGCTGGTGATCATCGGC
TTCATTGTAGCGATCCACGTGCTGCGCCTGCCGTCCCAGCCGATGGACCTGAAAGGGGGAGCCATATCCCTGTTCAAGGT
GCTGGTGACCTTCGACTTGGCCTGGGCGCTGTACAACCTGGTGGGGCTGGTGGAAACCTTCCTGGAGGGGTGGGTCCGCA
AGACCGAATCGACCCTGGACGACCACCTGCTCCCCTTCGTGCGCAAGAGCATCCGGGCGTTCGTCGTCTTCCTTGCCTTC
ATCATGACCATCCAGAACCTGGGCTACTCCATCTCCGGCCTGCTGGCCTCCTTCGGCATCGGTGGCCTGGCGGTGGCCCT
GGCCGCAAAGGACACCCTCTCCAACATCTTCGGCTCGCTGATGATCCTGCTCGACCGCCCCTTCCATGTGGGGGACTGGA
TCAAGGCGGGTGACCTGGAGGGGATCGTGGAAGAGGTGGGGTTTCGCTCAACCAAGATACGTACCTTCGAGAAAACCCAG
ATCACCGTGCCGAACAACGTGATCGCCAACCTGGCAGTGGACAACATCAGCCGCAGACCGAACCGGCGCATCAATATCAC
CGTCGGCGTAACCTACGAGACGAAACCGAAGCAGATGAGGCAGGCGGTCAACCAGATCCGTACCATGCTGCGCGAACATC
CGGCCATCGATCAGGATTTCTTCCTGGTCAACTTCACCGACTTCGGCGCCTCCTCCCTGGACATCATGGTCTACTGTTTC
ACCAGGAGCGTGGTCTGGGGCGAATACCTGGAGACCCGCCAGGATGTCAGCCTCAGGATCATGGAGATCCTGGACGGCCT
CGGCCTGGAGATCGCCTTCCCCAGCCGCAGCATCTATATCCGTGGCGGTGAAGATCGGTTTGAACCGGAGACAGGGCAAC
TCCCCCGTGAGGCAGAAACGAATTGA

Upstream 100 bases:

>100_bases
TTTACAAGGAAAAAAATAGCCGTTCCGACGCCCGGCACCCTTGCAATCCCGTTCTCCATCTGGTAAAGGATACCTTCCTG
AATCCCAGGGAGGTGTCGAT

Downstream 100 bases:

>100_bases
ACGTGTCCAACGCCCCCCGCTTCAACCTGCTGACCATCCTTGGTCCCACCGCCTCGGGCAAGACCCGGCTGGCCGTTAAT
CTGGCCCGGGAACTGGGGGG

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRELYSTAESILRQTFLGISLSRFAGAFLVLFLSFILKKILNHLFFKVVFPLAEKTRSRYDDLFFQAIRQPAEWLLVIIG
FIVAIHVLRLPSQPMDLKGGAISLFKVLVTFDLAWALYNLVGLVETFLEGWVRKTESTLDDHLLPFVRKSIRAFVVFLAF
IMTIQNLGYSISGLLASFGIGGLAVALAAKDTLSNIFGSLMILLDRPFHVGDWIKAGDLEGIVEEVGFRSTKIRTFEKTQ
ITVPNNVIANLAVDNISRRPNRRINITVGVTYETKPKQMRQAVNQIRTMLREHPAIDQDFFLVNFTDFGASSLDIMVYCF
TRSVVWGEYLETRQDVSLRIMEILDGLGLEIAFPSRSIYIRGGEDRFEPETGQLPREAETN

Sequences:

>Translated_381_residues
MRELYSTAESILRQTFLGISLSRFAGAFLVLFLSFILKKILNHLFFKVVFPLAEKTRSRYDDLFFQAIRQPAEWLLVIIG
FIVAIHVLRLPSQPMDLKGGAISLFKVLVTFDLAWALYNLVGLVETFLEGWVRKTESTLDDHLLPFVRKSIRAFVVFLAF
IMTIQNLGYSISGLLASFGIGGLAVALAAKDTLSNIFGSLMILLDRPFHVGDWIKAGDLEGIVEEVGFRSTKIRTFEKTQ
ITVPNNVIANLAVDNISRRPNRRINITVGVTYETKPKQMRQAVNQIRTMLREHPAIDQDFFLVNFTDFGASSLDIMVYCF
TRSVVWGEYLETRQDVSLRIMEILDGLGLEIAFPSRSIYIRGGEDRFEPETGQLPREAETN
>Mature_381_residues
MRELYSTAESILRQTFLGISLSRFAGAFLVLFLSFILKKILNHLFFKVVFPLAEKTRSRYDDLFFQAIRQPAEWLLVIIG
FIVAIHVLRLPSQPMDLKGGAISLFKVLVTFDLAWALYNLVGLVETFLEGWVRKTESTLDDHLLPFVRKSIRAFVVFLAF
IMTIQNLGYSISGLLASFGIGGLAVALAAKDTLSNIFGSLMILLDRPFHVGDWIKAGDLEGIVEEVGFRSTKIRTFEKTQ
ITVPNNVIANLAVDNISRRPNRRINITVGVTYETKPKQMRQAVNQIRTMLREHPAIDQDFFLVNFTDFGASSLDIMVYCF
TRSVVWGEYLETRQDVSLRIMEILDGLGLEIAFPSRSIYIRGGEDRFEPETGQLPREAETN

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=226, Percent_Identity=44.2477876106195, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789291, Length=235, Percent_Identity=29.7872340425532, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786670, Length=226, Percent_Identity=26.5486725663717, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 43187; Mature: 43187

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELYSTAESILRQTFLGISLSRFAGAFLVLFLSFILKKILNHLFFKVVFPLAEKTRSRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDLFFQAIRQPAEWLLVIIGFIVAIHVLRLPSQPMDLKGGAISLFKVLVTFDLAWALYNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VGLVETFLEGWVRKTESTLDDHLLPFVRKSIRAFVVFLAFIMTIQNLGYSISGLLASFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH
GGLAVALAAKDTLSNIFGSLMILLDRPFHVGDWIKAGDLEGIVEEVGFRSTKIRTFEKTQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCE
ITVPNNVIANLAVDNISRRPNRRINITVGVTYETKPKQMRQAVNQIRTMLREHPAIDQDF
EECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCE
FLVNFTDFGASSLDIMVYCFTRSVVWGEYLETRQDVSLRIMEILDGLGLEIAFPSRSIYI
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEE
RGGEDRFEPETGQLPREAETN
ECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRELYSTAESILRQTFLGISLSRFAGAFLVLFLSFILKKILNHLFFKVVFPLAEKTRSRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDLFFQAIRQPAEWLLVIIGFIVAIHVLRLPSQPMDLKGGAISLFKVLVTFDLAWALYNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VGLVETFLEGWVRKTESTLDDHLLPFVRKSIRAFVVFLAFIMTIQNLGYSISGLLASFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH
GGLAVALAAKDTLSNIFGSLMILLDRPFHVGDWIKAGDLEGIVEEVGFRSTKIRTFEKTQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCE
ITVPNNVIANLAVDNISRRPNRRINITVGVTYETKPKQMRQAVNQIRTMLREHPAIDQDF
EECCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCE
FLVNFTDFGASSLDIMVYCFTRSVVWGEYLETRQDVSLRIMEILDGLGLEIAFPSRSIYI
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEE
RGGEDRFEPETGQLPREAETN
ECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]